FFCP PHASE1:Mm9::chr2:125719081..125719104,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=134 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:125719081..125719104,+ | |||
|description=CAGE_peak_at_chr2:125719081..125719104,+ | |description=CAGE_peak_at_chr2:125719081..125719104,+ | ||
|id=chr2:125719081..125719104,+ | |id=chr2:125719081..125719104,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,8.72e-11,6;CL:0000187,8.72e-11,6;CL:0000056,8.72e-11,6;CL:0000222,3.49e-09,7;CL:0000192,1.28e-08,3;CL:0000359,1.28e-08,3;CL:0002539,1.28e-08,3;CL:0000514,1.28e-08,3;CL:0002610,9.02e-08,3;CL:0000355,4.80e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.28e-08,3;UBERON:0004237,1.28e-08,3;UBERON:0004695,1.28e-08,3;UBERON:0002111,1.28e-08,3;UBERON:0004178,1.28e-08,3;UBERON:0004684,9.02e-08,3;UBERON:0002275,9.02e-08,3;UBERON:0001134,4.80e-07,9;UBERON:0002036,4.80e-07,9;UBERON:0002385,4.80e-07,9;UBERON:0000486,4.80e-07,9;UBERON:0007503,4.80e-07,9;UBERON:0001015,4.80e-07,9;UBERON:0002329,4.80e-07,9;UBERON:0003082,4.80e-07,9;UBERON:0003059,4.80e-07,9;UBERON:0007282,4.80e-07,9;UBERON:0004290,4.80e-07,9;UBERON:0009618,4.80e-07,9 | |||
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| ||
|short_description=p@chr2:125719081..125719104,+ | |short_description=p@chr2:125719081..125719104,+ | ||
}} | }} |
Latest revision as of 22:58, 3 August 2015
Short description: | p@chr2:125719081..125719104, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:125719081..125719104, + |
Coexpression cluster: | MCL_coexpression_mm9:134 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 8.72e-11 | 6 |
muscle cell | 8.72e-11 | 6 |
myoblast | 8.72e-11 | 6 |
mesodermal cell | 3.49e-09 | 7 |
smooth muscle cell | 1.28e-08 | 3 |
vascular associated smooth muscle cell | 1.28e-08 | 3 |
aortic smooth muscle cell | 1.28e-08 | 3 |
smooth muscle myoblast | 1.28e-08 | 3 |
raphe nuclei neuron | 9.02e-08 | 3 |
multi-potent skeletal muscle stem cell | 4.80e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 1.28e-08 | 3 |
blood vessel smooth muscle | 1.28e-08 | 3 |
arterial system smooth muscle | 1.28e-08 | 3 |
artery smooth muscle tissue | 1.28e-08 | 3 |
aorta smooth muscle tissue | 1.28e-08 | 3 |
raphe nuclei | 9.02e-08 | 3 |
reticular formation | 9.02e-08 | 3 |
skeletal muscle tissue | 4.80e-07 | 9 |
striated muscle tissue | 4.80e-07 | 9 |
muscle tissue | 4.80e-07 | 9 |
multilaminar epithelium | 4.80e-07 | 9 |
epithelial vesicle | 4.80e-07 | 9 |
musculature | 4.80e-07 | 9 |
somite | 4.80e-07 | 9 |
myotome | 4.80e-07 | 9 |
presomitic mesoderm | 4.80e-07 | 9 |
presumptive segmental plate | 4.80e-07 | 9 |
dermomyotome | 4.80e-07 | 9 |
trunk paraxial mesoderm | 4.80e-07 | 9 |