FFCP PHASE1:Mm9::chr10:111433688..111433699,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=296|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:111433688..111433699,-|id=chr10:111433688..111433699,-|ontology_enrichment_celltype=CL:0002320!6.38e-12!46;CL:0000134!6.38e-12!46;CL:0000988!1.67e-11!32;CL:0002032!1.67e-11!32;CL:0000037!1.67e-11!32;CL:0000566!1.67e-11!32;CL:0000837!1.67e-11!32;CL:0000557!2.02e-11!7;CL:0000034!1.26e-10!97;CL:0000219!1.34e-10!54;CL:0000049!3.93e-10!19;CL:0000723!1.53e-08!91;CL:0000048!1.53e-08!91;CL:0000355!2.94e-08!9;CL:0000144!6.64e-08!121;CL:0000012!6.64e-08!121;CL:0000192!3.86e-07!3;CL:0000359!3.86e-07!3;CL:0002539!3.86e-07!3;CL:0000514!3.86e-07!3;CL:0000063!6.11e-07!66|ontology_enrichment_celltype_v019_2=CL:0000557,4.25e-17,7;CL:0000049,1.85e-15,19;CL:0000192,9.95e-14,3;CL:0000359,9.95e-14,3;CL:0002539,9.95e-14,3;CL:0000514,9.95e-14,3;CL:0000355,2.41e-12,9;CL:0002476,3.41e-10,2;CL:0000034,5.02e-10,97;CL:0000988,9.18e-09,32;CL:0002032,9.18e-09,32;CL:0000037,9.18e-09,32;CL:0000837,9.18e-09,32;CL:0000763,2.18e-07,16;CL:0000680,3.95e-07,6;CL:0000187,3.95e-07,6;CL:0000056,3.95e-07,6|ontology_enrichment_disease=DOID:0060100!2.90e-07!3;DOID:4045!2.90e-07!3|ontology_enrichment_disease_v019_2=DOID:0060100,4.48e-07,3;DOID:4045,4.48e-07,3|ontology_enrichment_uberon=UBERON:0002204!1.31e-15!32;UBERON:0002384!6.38e-12!46;UBERON:0001474!1.31e-09!22;UBERON:0004765!1.31e-09!22;UBERON:0001434!1.31e-09!22;UBERON:0002371!1.57e-09!16;UBERON:0001134!2.94e-08!9;UBERON:0002036!2.94e-08!9;UBERON:0002385!2.94e-08!9;UBERON:0000486!2.94e-08!9;UBERON:0001015!2.94e-08!9;UBERON:0004290!2.94e-08!9;UBERON:0003082!2.94e-08!9;UBERON:0000383!2.38e-07!10;UBERON:0001135!3.86e-07!3;UBERON:0004237!3.86e-07!3;UBERON:0004695!3.86e-07!3;UBERON:0002111!3.86e-07!3;UBERON:0004178!3.86e-07!3;UBERON:0000055!5.92e-07!5;UBERON:0001981!5.92e-07!5;UBERON:0002049!5.92e-07!5;UBERON:0007500!5.92e-07!5;UBERON:0007798!5.92e-07!5;UBERON:0004537!5.92e-07!5;UBERON:0006965!5.92e-07!5;UBERON:0002390!8.38e-07!45;UBERON:0003061!8.38e-07!45;UBERON:0000914!8.68e-07!17;UBERON:0003081!8.86e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0001135,9.95e-14,3;UBERON:0004237,9.95e-14,3;UBERON:0004695,9.95e-14,3;UBERON:0002111,9.95e-14,3;UBERON:0004178,9.95e-14,3;UBERON:0002204,4.57e-13,32;UBERON:0001134,2.41e-12,9;UBERON:0002036,2.41e-12,9;UBERON:0002385,2.41e-12,9;UBERON:0000486,2.41e-12,9;UBERON:0007503,2.41e-12,9;UBERON:0001015,2.41e-12,9;UBERON:0002329,2.41e-12,9;UBERON:0003082,2.41e-12,9;UBERON:0003059,2.41e-12,9;UBERON:0007282,2.41e-12,9;UBERON:0004290,2.41e-12,9;UBERON:0009618,2.41e-12,9;UBERON:0000383,4.23e-11,10;UBERON:0000947,1.93e-10,4;UBERON:0001637,1.93e-10,4;UBERON:0004573,1.93e-10,4;UBERON:0003509,1.93e-10,4;UBERON:0004571,1.93e-10,4;UBERON:0010191,1.93e-10,4;UBERON:0004572,1.93e-10,4;UBERON:0007524,4.42e-10,11;UBERON:0003077,4.42e-10,11;UBERON:0007285,4.42e-10,11;UBERON:0000055,1.86e-08,5;UBERON:0007500,1.86e-08,5;UBERON:0001981,1.86e-08,5;UBERON:0002049,1.86e-08,5;UBERON:0007798,1.86e-08,5;UBERON:0004537,1.86e-08,5;UBERON:0006965,1.86e-08,5;UBERON:0002371,2.18e-07,16|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0.513653904676515,0.0797721589953364,0.342401459862411,0,0,0.202475267389826,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,2.3440060335714,1.57057123192139,15.8822501768374,2.04913645487534,1.45653105909346,1.51076181570693,1.01376931219515,1.10128051297009,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0.988866362566974,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0.340860645156116,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0,0,0,0,0,5.27186547826049,10.1983464268879,4.57452817463033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.91549231119264,6.43369767786788,3.9782889915383,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0.405720242777006,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,2.71952841909355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0.185194527369712,0,0,0,1.86976272993241,1.81936888020755,2.48759952847963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:111433688..111433699,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=296 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:111433688..111433699,- | |||
|description=CAGE_peak_at_chr10:111433688..111433699,- | |||
|id=chr10:111433688..111433699,- | |||
|ontology_enrichment_celltype=CL:0002320!6.38e-12!46;CL:0000134!6.38e-12!46;CL:0000988!1.67e-11!32;CL:0002032!1.67e-11!32;CL:0000037!1.67e-11!32;CL:0000566!1.67e-11!32;CL:0000837!1.67e-11!32;CL:0000557!2.02e-11!7;CL:0000034!1.26e-10!97;CL:0000219!1.34e-10!54;CL:0000049!3.93e-10!19;CL:0000723!1.53e-08!91;CL:0000048!1.53e-08!91;CL:0000355!2.94e-08!9;CL:0000144!6.64e-08!121;CL:0000012!6.64e-08!121;CL:0000192!3.86e-07!3;CL:0000359!3.86e-07!3;CL:0002539!3.86e-07!3;CL:0000514!3.86e-07!3;CL:0000063!6.11e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,4.25e-17,7;CL:0000049,1.85e-15,19;CL:0000192,9.95e-14,3;CL:0000359,9.95e-14,3;CL:0002539,9.95e-14,3;CL:0000514,9.95e-14,3;CL:0000355,2.41e-12,9;CL:0002476,3.41e-10,2;CL:0000034,5.02e-10,97;CL:0000988,9.18e-09,32;CL:0002032,9.18e-09,32;CL:0000037,9.18e-09,32;CL:0000837,9.18e-09,32;CL:0000763,2.18e-07,16;CL:0000680,3.95e-07,6;CL:0000187,3.95e-07,6;CL:0000056,3.95e-07,6 | |||
|ontology_enrichment_disease=DOID:0060100!2.90e-07!3;DOID:4045!2.90e-07!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.48e-07,3;DOID:4045,4.48e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002204!1.31e-15!32;UBERON:0002384!6.38e-12!46;UBERON:0001474!1.31e-09!22;UBERON:0004765!1.31e-09!22;UBERON:0001434!1.31e-09!22;UBERON:0002371!1.57e-09!16;UBERON:0001134!2.94e-08!9;UBERON:0002036!2.94e-08!9;UBERON:0002385!2.94e-08!9;UBERON:0000486!2.94e-08!9;UBERON:0001015!2.94e-08!9;UBERON:0004290!2.94e-08!9;UBERON:0003082!2.94e-08!9;UBERON:0000383!2.38e-07!10;UBERON:0001135!3.86e-07!3;UBERON:0004237!3.86e-07!3;UBERON:0004695!3.86e-07!3;UBERON:0002111!3.86e-07!3;UBERON:0004178!3.86e-07!3;UBERON:0000055!5.92e-07!5;UBERON:0001981!5.92e-07!5;UBERON:0002049!5.92e-07!5;UBERON:0007500!5.92e-07!5;UBERON:0007798!5.92e-07!5;UBERON:0004537!5.92e-07!5;UBERON:0006965!5.92e-07!5;UBERON:0002390!8.38e-07!45;UBERON:0003061!8.38e-07!45;UBERON:0000914!8.68e-07!17;UBERON:0003081!8.86e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,9.95e-14,3;UBERON:0004237,9.95e-14,3;UBERON:0004695,9.95e-14,3;UBERON:0002111,9.95e-14,3;UBERON:0004178,9.95e-14,3;UBERON:0002204,4.57e-13,32;UBERON:0001134,2.41e-12,9;UBERON:0002036,2.41e-12,9;UBERON:0002385,2.41e-12,9;UBERON:0000486,2.41e-12,9;UBERON:0007503,2.41e-12,9;UBERON:0001015,2.41e-12,9;UBERON:0002329,2.41e-12,9;UBERON:0003082,2.41e-12,9;UBERON:0003059,2.41e-12,9;UBERON:0007282,2.41e-12,9;UBERON:0004290,2.41e-12,9;UBERON:0009618,2.41e-12,9;UBERON:0000383,4.23e-11,10;UBERON:0000947,1.93e-10,4;UBERON:0001637,1.93e-10,4;UBERON:0004573,1.93e-10,4;UBERON:0003509,1.93e-10,4;UBERON:0004571,1.93e-10,4;UBERON:0010191,1.93e-10,4;UBERON:0004572,1.93e-10,4;UBERON:0007524,4.42e-10,11;UBERON:0003077,4.42e-10,11;UBERON:0007285,4.42e-10,11;UBERON:0000055,1.86e-08,5;UBERON:0007500,1.86e-08,5;UBERON:0001981,1.86e-08,5;UBERON:0002049,1.86e-08,5;UBERON:0007798,1.86e-08,5;UBERON:0004537,1.86e-08,5;UBERON:0006965,1.86e-08,5;UBERON:0002371,2.18e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0.513653904676515,0.0797721589953364,0.342401459862411,0,0,0.202475267389826,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,2.3440060335714,1.57057123192139,15.8822501768374,2.04913645487534,1.45653105909346,1.51076181570693,1.01376931219515,1.10128051297009,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0.988866362566974,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0.340860645156116,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0,0,0,0,0,5.27186547826049,10.1983464268879,4.57452817463033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.91549231119264,6.43369767786788,3.9782889915383,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0.405720242777006,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,2.71952841909355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0.185194527369712,0,0,0,1.86976272993241,1.81936888020755,2.48759952847963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:111433688..111433699,- | |||
}} |
Latest revision as of 21:11, 3 August 2015
Short description: | p@chr10:111433688..111433699, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:111433688..111433699, - |
Coexpression cluster: | MCL_coexpression_mm9:296 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 4.25e-17 | 7 |
common myeloid progenitor | 1.85e-15 | 19 |
smooth muscle cell | 9.95e-14 | 3 |
vascular associated smooth muscle cell | 9.95e-14 | 3 |
aortic smooth muscle cell | 9.95e-14 | 3 |
smooth muscle myoblast | 9.95e-14 | 3 |
multi-potent skeletal muscle stem cell | 2.41e-12 | 9 |
bone marrow macrophage | 3.41e-10 | 2 |
stem cell | 5.02e-10 | 97 |
hematopoietic cell | 9.18e-09 | 32 |
hematopoietic oligopotent progenitor cell | 9.18e-09 | 32 |
hematopoietic stem cell | 9.18e-09 | 32 |
hematopoietic multipotent progenitor cell | 9.18e-09 | 32 |
myeloid cell | 2.18e-07 | 16 |
muscle precursor cell | 3.95e-07 | 6 |
muscle cell | 3.95e-07 | 6 |
myoblast | 3.95e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.48e-07 | 3 |
muscle cancer | 4.48e-07 | 3 |