FFCP PHASE1:Mm9::chr13:97841518..97841581,+: Difference between revisions
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{{FFCP|EntrezGene=320557|HGNC=|MCL_coexpression_id=13|UniProt=Q5XG69|association_with_transcript=-16bp_to_ENSMUST00000042517,NM_001100458,uc007rnr.2_5end|description=CAGE_peak_1_at_Fam169a_5end|id=chr13:97841518..97841581,+|ontology_enrichment_celltype=CL:0000117!7.78e-13!23;CL:0000337!7.78e-13!23;CL:0000540!1.67e-11!33;CL:0000047!1.67e-11!33;CL:0000031!1.67e-11!33;CL:0000404!1.67e-11!33;CL:0000221!2.22e-07!44;CL:0000133!2.22e-07!44;CL:0000393!2.83e-07!39;CL:0000211!2.83e-07!39;CL:0002319!4.97e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,6.87e-15,23;CL:0000337,6.87e-15,23;CL:0000540,2.39e-10,33;CL:0000047,2.39e-10,33;CL:0000031,2.39e-10,33;CL:0000404,2.39e-10,33;CL:0000393,3.57e-07,39;CL:0000211,3.57e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.07e-22!71;UBERON:0003075!2.07e-22!71;UBERON:0007284!2.07e-22!71;UBERON:0000033!2.42e-22!63;UBERON:0001017!6.25e-21!73;UBERON:0005743!6.25e-21!73;UBERON:0000073!1.97e-20!75;UBERON:0001016!1.97e-20!75;UBERON:0003056!5.11e-20!49;UBERON:0004121!1.84e-19!102;UBERON:0000924!1.84e-19!102;UBERON:0006601!1.84e-19!102;UBERON:0001049!3.28e-19!52;UBERON:0005068!3.28e-19!52;UBERON:0006241!3.28e-19!52;UBERON:0007135!3.28e-19!52;UBERON:0000955!5.10e-18!50;UBERON:0006238!5.10e-18!50;UBERON:0002616!2.58e-17!49;UBERON:0002020!5.92e-17!34;UBERON:0003080!1.78e-15!40;UBERON:0002780!6.34e-15!39;UBERON:0001890!6.34e-15!39;UBERON:0006240!6.34e-15!39;UBERON:0002791!9.89e-14!29;UBERON:0003528!9.89e-14!29;UBERON:0001893!9.89e-14!29;UBERON:0000153!2.19e-10!94;UBERON:0007811!2.68e-10!86;UBERON:0000956!2.43e-09!21;UBERON:0001869!2.43e-09!21;UBERON:0000203!2.43e-09!21;UBERON:0002021!3.67e-08!10;UBERON:0000411!3.67e-08!10;UBERON:0001950!3.67e-08!10;UBERON:0002619!5.83e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.77e-27,64;UBERON:0003075,1.77e-27,64;UBERON:0007284,1.77e-27,64;UBERON:0000073,4.34e-24,54;UBERON:0010371,8.55e-24,73;UBERON:0003056,1.92e-23,49;UBERON:0001049,1.86e-22,52;UBERON:0005068,1.86e-22,52;UBERON:0006241,1.86e-22,52;UBERON:0007135,1.86e-22,52;UBERON:0001017,4.99e-21,73;UBERON:0004121,1.38e-20,95;UBERON:0000924,1.38e-20,95;UBERON:0006601,1.38e-20,95;UBERON:0002020,2.25e-20,34;UBERON:0010314,5.02e-20,92;UBERON:0001016,8.40e-20,75;UBERON:0000955,5.94e-19,47;UBERON:0006238,5.94e-19,47;UBERON:0002616,3.86e-18,46;UBERON:0003080,4.59e-18,40;UBERON:0002780,2.06e-17,39;UBERON:0001890,2.06e-17,39;UBERON:0006240,2.06e-17,39;UBERON:0003528,1.55e-16,29;UBERON:0002791,1.55e-16,29;UBERON:0001893,1.55e-16,29;UBERON:0000956,2.62e-11,21;UBERON:0001869,2.62e-11,21;UBERON:0000203,2.62e-11,21;UBERON:0002619,1.10e-09,17;UBERON:0002021,2.29e-09,10;UBERON:0000411,2.29e-09,10;UBERON:0001950,2.29e-09,10|phase1_expression=2.5623815536767,0.348975407639361,0,0.30246421130683,0,0,0,0,0.140788722151667,0.468129052643987,0,0,0,0,0,0,0,0,0,0,3.40173160604279,3.17731043842833,4.4403964153619,0,0,0,0,0,0,0,0,5.08024538767705,3.07532393792285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,9.1042407386819,8.99284664762456,7.60597684207415,0,0,0,0,0,0.299600110518405,0.768436610643109,4.25127410464758,3.10513658162888,2.10324961351382,7.7125765789027,7.73039893330647,4.40966877173835,2.77951865952885,8.27296907949019,9.91042928994498,9.70423769447427,7.98753972932466,8.5726087024626,11.3444678066988,10.939180781692,3.90856198601933,9.00420176050688,7.48711414106369,17.0884579574727,21.7828671622628,12.4887628702951,0.302904773332736,0.377857800533928,0.289864488701678,0,0,0,0,0,0.702222100658759,0,0,0,4.92951969218382,0,0,0,0,0,0,0.5709193985953,0,0.29688427812965,0.867426633830679,0.608930956624282,0.922461989024234,0.150722640552623,1.05829836422134,0.376999773989026,0.247194967734374,0,0,0.161766849947409,0,0,0,2.34224637609238,3.56059401582874,0,0.599075622529601,0.599902730993408,0.381210681219194,8.23848516726525,8.23501085073528,10.9319286338192,11.4724051326902,12.0186264945255,5.61027720310812,6.00292673350703,1.93494791315601,1.11966273549084,2.77995034277042,3.57751155007006,5.46505860443356,7.81667155073808,7.38254732201932,5.72678307775717,7.41597840749474,6.02134485338794,6.46541899462129,8.2785078636485,1.5089759505299,2.83659120251729,1.93546236580344,1.31517439456545,1.11218899690239,0.348252166522167,0.411564272815887,4.37875387000685,0,0.257347907114715,0.284163499395593,4.97101854085205,3.51789089971644,4.8616756594474,3.07768156260773,3.34499193970586,0.925602677324269,1.86027155800326,0.536546802799238,1.5179494507732,1.15191894939436,0.164167464079095,0.243206428637567,0,0,0,8.41159794256509,9.98174740079059,0,0,2.77274725695804,2.55460339046482,1.67527699718721,0.80673409849337,1.11189021922435,0.380451252225118,0,0,0.251335208800269,0.397912944082302,0.19496408711912,0,0,0,0.758671603812327,2.28497025219458,1.1270773567308,1.22190796707189,0.775809948670503,1.75339549725796,0.189709611372772,0,0,0.123397163921801,0,0.500535317148282,1.57247196090562,0.449724224769707,0,0.24117715975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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:320557 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q5XG69 | |||
|association_with_transcript=-16bp_to_ENSMUST00000042517,NM_001100458,uc007rnr.2_5end | |||
|cluster_id=chr13:97841518..97841581,+ | |||
|description=CAGE_peak_1_at_Fam169a_5end | |||
|id=chr13:97841518..97841581,+ | |||
|ontology_enrichment_celltype=CL:0000117!7.78e-13!23;CL:0000337!7.78e-13!23;CL:0000540!1.67e-11!33;CL:0000047!1.67e-11!33;CL:0000031!1.67e-11!33;CL:0000404!1.67e-11!33;CL:0000221!2.22e-07!44;CL:0000133!2.22e-07!44;CL:0000393!2.83e-07!39;CL:0000211!2.83e-07!39;CL:0002319!4.97e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.87e-15,23;CL:0000337,6.87e-15,23;CL:0000540,2.39e-10,33;CL:0000047,2.39e-10,33;CL:0000031,2.39e-10,33;CL:0000404,2.39e-10,33;CL:0000393,3.57e-07,39;CL:0000211,3.57e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.07e-22!71;UBERON:0003075!2.07e-22!71;UBERON:0007284!2.07e-22!71;UBERON:0000033!2.42e-22!63;UBERON:0001017!6.25e-21!73;UBERON:0005743!6.25e-21!73;UBERON:0000073!1.97e-20!75;UBERON:0001016!1.97e-20!75;UBERON:0003056!5.11e-20!49;UBERON:0004121!1.84e-19!102;UBERON:0000924!1.84e-19!102;UBERON:0006601!1.84e-19!102;UBERON:0001049!3.28e-19!52;UBERON:0005068!3.28e-19!52;UBERON:0006241!3.28e-19!52;UBERON:0007135!3.28e-19!52;UBERON:0000955!5.10e-18!50;UBERON:0006238!5.10e-18!50;UBERON:0002616!2.58e-17!49;UBERON:0002020!5.92e-17!34;UBERON:0003080!1.78e-15!40;UBERON:0002780!6.34e-15!39;UBERON:0001890!6.34e-15!39;UBERON:0006240!6.34e-15!39;UBERON:0002791!9.89e-14!29;UBERON:0003528!9.89e-14!29;UBERON:0001893!9.89e-14!29;UBERON:0000153!2.19e-10!94;UBERON:0007811!2.68e-10!86;UBERON:0000956!2.43e-09!21;UBERON:0001869!2.43e-09!21;UBERON:0000203!2.43e-09!21;UBERON:0002021!3.67e-08!10;UBERON:0000411!3.67e-08!10;UBERON:0001950!3.67e-08!10;UBERON:0002619!5.83e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.77e-27,64;UBERON:0003075,1.77e-27,64;UBERON:0007284,1.77e-27,64;UBERON:0000073,4.34e-24,54;UBERON:0010371,8.55e-24,73;UBERON:0003056,1.92e-23,49;UBERON:0001049,1.86e-22,52;UBERON:0005068,1.86e-22,52;UBERON:0006241,1.86e-22,52;UBERON:0007135,1.86e-22,52;UBERON:0001017,4.99e-21,73;UBERON:0004121,1.38e-20,95;UBERON:0000924,1.38e-20,95;UBERON:0006601,1.38e-20,95;UBERON:0002020,2.25e-20,34;UBERON:0010314,5.02e-20,92;UBERON:0001016,8.40e-20,75;UBERON:0000955,5.94e-19,47;UBERON:0006238,5.94e-19,47;UBERON:0002616,3.86e-18,46;UBERON:0003080,4.59e-18,40;UBERON:0002780,2.06e-17,39;UBERON:0001890,2.06e-17,39;UBERON:0006240,2.06e-17,39;UBERON:0003528,1.55e-16,29;UBERON:0002791,1.55e-16,29;UBERON:0001893,1.55e-16,29;UBERON:0000956,2.62e-11,21;UBERON:0001869,2.62e-11,21;UBERON:0000203,2.62e-11,21;UBERON:0002619,1.10e-09,17;UBERON:0002021,2.29e-09,10;UBERON:0000411,2.29e-09,10;UBERON:0001950,2.29e-09,10 | |||
|phase1_expression=2.5623815536767,0.348975407639361,0,0.30246421130683,0,0,0,0,0.140788722151667,0.468129052643987,0,0,0,0,0,0,0,0,0,0,3.40173160604279,3.17731043842833,4.4403964153619,0,0,0,0,0,0,0,0,5.08024538767705,3.07532393792285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,9.1042407386819,8.99284664762456,7.60597684207415,0,0,0,0,0,0.299600110518405,0.768436610643109,4.25127410464758,3.10513658162888,2.10324961351382,7.7125765789027,7.73039893330647,4.40966877173835,2.77951865952885,8.27296907949019,9.91042928994498,9.70423769447427,7.98753972932466,8.5726087024626,11.3444678066988,10.939180781692,3.90856198601933,9.00420176050688,7.48711414106369,17.0884579574727,21.7828671622628,12.4887628702951,0.302904773332736,0.377857800533928,0.289864488701678,0,0,0,0,0,0.702222100658759,0,0,0,4.92951969218382,0,0,0,0,0,0,0.5709193985953,0,0.29688427812965,0.867426633830679,0.608930956624282,0.922461989024234,0.150722640552623,1.05829836422134,0.376999773989026,0.247194967734374,0,0,0.161766849947409,0,0,0,2.34224637609238,3.56059401582874,0,0.599075622529601,0.599902730993408,0.381210681219194,8.23848516726525,8.23501085073528,10.9319286338192,11.4724051326902,12.0186264945255,5.61027720310812,6.00292673350703,1.93494791315601,1.11966273549084,2.77995034277042,3.57751155007006,5.46505860443356,7.81667155073808,7.38254732201932,5.72678307775717,7.41597840749474,6.02134485338794,6.46541899462129,8.2785078636485,1.5089759505299,2.83659120251729,1.93546236580344,1.31517439456545,1.11218899690239,0.348252166522167,0.411564272815887,4.37875387000685,0,0.257347907114715,0.284163499395593,4.97101854085205,3.51789089971644,4.8616756594474,3.07768156260773,3.34499193970586,0.925602677324269,1.86027155800326,0.536546802799238,1.5179494507732,1.15191894939436,0.164167464079095,0.243206428637567,0,0,0,8.41159794256509,9.98174740079059,0,0,2.77274725695804,2.55460339046482,1.67527699718721,0.80673409849337,1.11189021922435,0.380451252225118,0,0,0.251335208800269,0.397912944082302,0.19496408711912,0,0,0,0.758671603812327,2.28497025219458,1.1270773567308,1.22190796707189,0.775809948670503,1.75339549725796,0.189709611372772,0,0,0.123397163921801,0,0.500535317148282,1.57247196090562,0.449724224769707,0,0.241177159752417,0,0,0.324270453550071,0,0,0,0,0,0,0,0,1.89491411770485,1.79261474086228,0.339490171550376,0.234690248288502,0,0,0,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,1.10374698521893,5.45872005958493,4.10240903072711,0,0,2.52406575533005,0.780877488593277,1.07711698866399,0.955875191810208,0.891194696329576,0.283076530788832,2.02405350837447,0.584511715822624,0.395287777946524,14.7807805554031,0.425820255624806,0.712262414669021,2.44330439030364,0.164970122972535,0,1.69946445308487,0.302323556964751,0,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0,0,0,1.70219802876894,3.42116078659489,0.388076051348264,2.14337035031592,1.59606210278046,1.42695054081656,2.13913726782757,1.2178597964584,2.3467170806371,1.0591603543191,0,0,0,0,0,0,0,4.63563255026274,0,0,0,0.376736914009382,0.136694227721025,0,1.18984900995699,0.839708713941948,1.38199973804424,0,3.16335993581135,1.42323626988794,0.756037385752609,0.627264888043406,0.655087691238533,0.674321731924103,0.0826534557253359,0,0.259229946583586,0.621339313086926,12.4012446510522,3.58839710505549,3.64008679005615,1.55560950675238,1.42075805825504,1.18269287843545,1.40828686374905,5.208175393758,7.13043542094834,10.1465330746923,8.64090018773596,0,0.202725215290164,0.102710957164827,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0,0.0974578807397524,0.0962118416403295,0,0,1.33191572024439,1.16628013592318,1.00730769818447,0.19318959403219,0,0.183151624267265,0,0.501572104035363,13.5540442228096,14.2700823317225,18.3326564300607,14.9512268639008,11.6464028361009,19.6402413321322,11.4753825039407,11.7083512838297,9.9691329976525,10.8729665467882,2.59468368960442,4.38927360741134,2.39027048055788,2.18796045361465,1.88651846365184,2.02227859295016,0.888986911206461,1.44224540067226,3.85103051510178,2.27427490587418,2.5347929989024,1.69763707247469,1.77918864192777,2.4969809437899,2.06767688240208,1.42888107384922,2.0859178670074,3.47236596834669,3.29668720642645,1.17759136107518,2.74295401908332,1.59728225543404,1.66905332963125,0.872078499793971,2.07040636913727,2.28459441307527,2.0122077016005,1.05227884575137,2.17286582153379,2.80571135828869,2.25406534435931,2.1670986122624,1.63692417267876,2.01417893541756,1.15743966588685,3.49734809113124,2.33931608445408,2.57845264857958,1.14772999241306,0.220591419119515,0.463735671240843 | |||
|short_description=p1@Fam169a | |||
}} |
Revision as of 20:43, 3 August 2015
Short description: | p1@Fam169a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fam169a_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -16bp_to_ENSMUST00000042517, NM_001100458, uc007rnr.2_5end |
EntrezGene: | 320557 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.87e-15 | 23 |
neuroblast (sensu Vertebrata) | 6.87e-15 | 23 |
neuron | 2.39e-10 | 33 |
neuronal stem cell | 2.39e-10 | 33 |
neuroblast | 2.39e-10 | 33 |
electrically signaling cell | 2.39e-10 | 33 |
electrically responsive cell | 3.57e-07 | 39 |
electrically active cell | 3.57e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.77e-27 | 64 |
neural plate | 1.77e-27 | 64 |
presumptive neural plate | 1.77e-27 | 64 |
regional part of nervous system | 4.34e-24 | 54 |
ecto-epithelium | 8.55e-24 | 73 |
pre-chordal neural plate | 1.92e-23 | 49 |
neural tube | 1.86e-22 | 52 |
neural rod | 1.86e-22 | 52 |
future spinal cord | 1.86e-22 | 52 |
neural keel | 1.86e-22 | 52 |
central nervous system | 4.99e-21 | 73 |
ectoderm-derived structure | 1.38e-20 | 95 |
ectoderm | 1.38e-20 | 95 |
presumptive ectoderm | 1.38e-20 | 95 |
gray matter | 2.25e-20 | 34 |
structure with developmental contribution from neural crest | 5.02e-20 | 92 |
nervous system | 8.40e-20 | 75 |
brain | 5.94e-19 | 47 |
future brain | 5.94e-19 | 47 |
regional part of brain | 3.86e-18 | 46 |
anterior neural tube | 4.59e-18 | 40 |
regional part of forebrain | 2.06e-17 | 39 |
forebrain | 2.06e-17 | 39 |
future forebrain | 2.06e-17 | 39 |
brain grey matter | 1.55e-16 | 29 |
regional part of telencephalon | 1.55e-16 | 29 |
telencephalon | 1.55e-16 | 29 |
cerebral cortex | 2.62e-11 | 21 |
cerebral hemisphere | 2.62e-11 | 21 |
pallium | 2.62e-11 | 21 |
regional part of cerebral cortex | 1.10e-09 | 17 |
occipital lobe | 2.29e-09 | 10 |
visual cortex | 2.29e-09 | 10 |
neocortex | 2.29e-09 | 10 |