FFCP PHASE1:Mm9::chr10:104477319..104477348,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=432 | |MCL_coexpression_id=432 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000082498_5end | |association_with_transcript=0bp_to_ENSMUST00000082498_5end | ||
|cluster_id=chr10:104477319..104477348,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000082498_5end | |description=CAGE_peak_1_at_ENSMUST00000082498_5end | ||
|id=chr10:104477319..104477348,+ | |id=chr10:104477319..104477348,+ | ||
|ontology_enrichment_celltype=CL:0000548!4.67e-35!115;CL:0000004!4.67e-35!115;CL:0000255!4.67e-35!115;CL:0002371!2.83e-33!118;CL:0000144!1.38e-31!121;CL:0000012!1.38e-31!121;CL:0000723!7.31e-31!91;CL:0000048!7.31e-31!91;CL:0000034!1.15e-30!97;CL:0000055!2.02e-23!50;CL:0002319!4.49e-23!43;CL:0002321!2.41e-22!70;CL:0000220!2.41e-22!70;CL:0000221!3.78e-22!44;CL:0000133!3.78e-22!44;CL:0000540!2.48e-18!33;CL:0000047!2.48e-18!33;CL:0000031!2.48e-18!33;CL:0000404!2.48e-18!33;CL:0000393!6.97e-18!39;CL:0000211!6.97e-18!39;CL:0000219!1.12e-17!54;CL:0000117!6.81e-16!23;CL:0000337!6.81e-16!23;CL:0002320!2.04e-14!46;CL:0000134!2.04e-14!46;CL:0002031!1.01e-11!25;CL:0000063!3.43e-10!66;CL:0000839!5.97e-10!13;CL:0000414!6.35e-08!11;CL:0000988!2.53e-07!32;CL:0002032!2.53e-07!32;CL:0000037!2.53e-07!32;CL:0000566!2.53e-07!32;CL:0000837!2.53e-07!32;CL:0000763!4.02e-07!16;CL:0000050!8.41e-07!9 | |ontology_enrichment_celltype=CL:0000548!4.67e-35!115;CL:0000004!4.67e-35!115;CL:0000255!4.67e-35!115;CL:0002371!2.83e-33!118;CL:0000144!1.38e-31!121;CL:0000012!1.38e-31!121;CL:0000723!7.31e-31!91;CL:0000048!7.31e-31!91;CL:0000034!1.15e-30!97;CL:0000055!2.02e-23!50;CL:0002319!4.49e-23!43;CL:0002321!2.41e-22!70;CL:0000220!2.41e-22!70;CL:0000221!3.78e-22!44;CL:0000133!3.78e-22!44;CL:0000540!2.48e-18!33;CL:0000047!2.48e-18!33;CL:0000031!2.48e-18!33;CL:0000404!2.48e-18!33;CL:0000393!6.97e-18!39;CL:0000211!6.97e-18!39;CL:0000219!1.12e-17!54;CL:0000117!6.81e-16!23;CL:0000337!6.81e-16!23;CL:0002320!2.04e-14!46;CL:0000134!2.04e-14!46;CL:0002031!1.01e-11!25;CL:0000063!3.43e-10!66;CL:0000839!5.97e-10!13;CL:0000414!6.35e-08!11;CL:0000988!2.53e-07!32;CL:0002032!2.53e-07!32;CL:0000037!2.53e-07!32;CL:0000566!2.53e-07!32;CL:0000837!2.53e-07!32;CL:0000763!4.02e-07!16;CL:0000050!8.41e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000034,2.38e-36,97;CL:0000723,1.33e-35,91;CL:0000048,1.33e-35,91;CL:0002321,1.45e-24,70;CL:0002319,1.70e-23,43;CL:0000117,2.94e-23,23;CL:0000337,2.94e-23,23;CL:0000540,7.95e-23,33;CL:0000047,7.95e-23,33;CL:0000031,7.95e-23,33;CL:0000404,7.95e-23,33;CL:0000221,1.01e-22,44;CL:0000133,1.01e-22,44;CL:0000393,5.60e-21,39;CL:0000211,5.60e-21,39;CL:0002320,4.09e-16,46;CL:0000134,4.09e-16,46;CL:0000219,5.55e-16,54;CL:0002031,1.60e-10,25;CL:0000839,1.88e-09,13;CL:0000988,3.40e-07,32;CL:0002032,3.40e-07,32;CL:0000037,3.40e-07,32;CL:0000837,3.40e-07,32;CL:0000763,3.68e-07,16;CL:0000182,4.11e-07,5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.60e-17!75;UBERON:0001016!8.60e-17!75;UBERON:0001017!3.36e-16!73;UBERON:0005743!3.36e-16!73;UBERON:0002384!2.04e-14!46;UBERON:0002020!3.69e-13!34;UBERON:0002791!6.10e-10!29;UBERON:0003528!6.10e-10!29;UBERON:0001893!6.10e-10!29;UBERON:0004121!1.34e-09!102;UBERON:0000924!1.34e-09!102;UBERON:0006601!1.34e-09!102;UBERON:0001049!6.75e-08!52;UBERON:0005068!6.75e-08!52;UBERON:0006241!6.75e-08!52;UBERON:0007135!6.75e-08!52;UBERON:0000956!1.13e-07!21;UBERON:0001869!1.13e-07!21;UBERON:0000203!1.13e-07!21;UBERON:0000955!2.01e-07!50;UBERON:0006238!2.01e-07!50;UBERON:0002616!3.39e-07!49;UBERON:0002371!8.21e-07!16;UBERON:0002619!8.85e-07!17 | |ontology_enrichment_uberon=UBERON:0000073!8.60e-17!75;UBERON:0001016!8.60e-17!75;UBERON:0001017!3.36e-16!73;UBERON:0005743!3.36e-16!73;UBERON:0002384!2.04e-14!46;UBERON:0002020!3.69e-13!34;UBERON:0002791!6.10e-10!29;UBERON:0003528!6.10e-10!29;UBERON:0001893!6.10e-10!29;UBERON:0004121!1.34e-09!102;UBERON:0000924!1.34e-09!102;UBERON:0006601!1.34e-09!102;UBERON:0001049!6.75e-08!52;UBERON:0005068!6.75e-08!52;UBERON:0006241!6.75e-08!52;UBERON:0007135!6.75e-08!52;UBERON:0000956!1.13e-07!21;UBERON:0001869!1.13e-07!21;UBERON:0000203!1.13e-07!21;UBERON:0000955!2.01e-07!50;UBERON:0006238!2.01e-07!50;UBERON:0002616!3.39e-07!49;UBERON:0002371!8.21e-07!16;UBERON:0002619!8.85e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.53e-18,34;UBERON:0001017,1.95e-18,73;UBERON:0001016,1.29e-17,75;UBERON:0002384,4.09e-16,46;UBERON:0003528,1.02e-13,29;UBERON:0002791,1.02e-13,29;UBERON:0001893,1.02e-13,29;UBERON:0000073,4.19e-13,54;UBERON:0004121,2.17e-11,95;UBERON:0000924,2.17e-11,95;UBERON:0006601,2.17e-11,95;UBERON:0001049,1.46e-10,52;UBERON:0005068,1.46e-10,52;UBERON:0006241,1.46e-10,52;UBERON:0007135,1.46e-10,52;UBERON:0000956,8.69e-10,21;UBERON:0001869,8.69e-10,21;UBERON:0000203,8.69e-10,21;UBERON:0002780,1.19e-08,39;UBERON:0001890,1.19e-08,39;UBERON:0006240,1.19e-08,39;UBERON:0002346,1.36e-08,64;UBERON:0003075,1.36e-08,64;UBERON:0007284,1.36e-08,64;UBERON:0003080,2.73e-08,40;UBERON:0002619,3.60e-08,17;UBERON:0002616,1.89e-07,46;UBERON:0002021,3.44e-07,10;UBERON:0000411,3.44e-07,10;UBERON:0001950,3.44e-07,10;UBERON:0000955,3.61e-07,47;UBERON:0006238,3.61e-07,47;UBERON:0002371,8.90e-07,16 | |||
|phase1_expression=0,0,0,0,1.00179145989269,0,0,1.93684985162364,1.68946466582,4.68129052643987,2.05461561870606,1.03703806693937,2.73921167889929,2.01066925563694,0.999329285446988,0.607425802169478,5.59649502502517,2.05050407482854,0.822686601634433,5.51706547337439,0.17008658030214,0.0992909512008853,0.522399578277871,0.159992422793407,0,0,0,0,0.380046838912748,0,0.221730510655305,27.9413496322238,6.1506478758457,47.5445043046316,0,0.332469290716985,0,0,0,0,0.588231488031014,0,0.485510353031154,0,0.101376931219515,0,6.25913075478431,0.872100625521786,3.51497892375155,0.194429899074283,0.55994568650145,1.43752564364972,0.503347818173209,0,0,0.514518872071894,1.14613375975503,4.12537673821954,3.43937983461316,4.7609188134483,2.53532561402472,3.72728985276045,6.22506357277798,2.2497492932035,9.88866362566974,7.8152812644071,6.2916023208865,3.45796474789399,1.97010263386108,4.3201900266141,2.94454945891935,2.85650984403804,4.8591079009355,2.69479758272899,3.25874601462004,2.75765635983006,12.1127469099328,3.19218345212969,1.99688493233117,5.40733779693795,2.37867873366265,5.73004707612436,2.51264699101243,5.06486349028512,3.51435969886663,6.77645746589436,4.8406371471695,3.16879057903011,0.454357159999104,0.302286240427142,2.31891590961342,3.44169550792555,4.75979933595425,10.2543606411185,7.79731700937203,6.72040330646003,0,0,1.81850203222008,0.70667914902068,0,0,2.54805239706646,0,3.24736561516821,2.02687892380079,2.02209778005913,0.22836775943812,0,0,0,0,0,0,0,0.125666591329675,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0.180062129805349,0,0,0,0.0937017245597288,0.517406741478031,0.215567992932842,0,0.351902248327898,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0.568474235311454,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,18.0949540727127,7.07077388964322,0,0,0.160550589987792,0,0,0,0.315508219416257,1.17131623288992,2.58508077279359,0.955875191810208,2.00518806674155,1.69845918473299,0.809621403349789,1.46127928955656,1.97643888973262,0.321321316421807,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0.100826185136841,0.194915761479505,0.192423683280659,0.116876902181569,0,2.88581739386284,1.34570784914214,1.17519231454855,0,0.187682475451182,0.183151624267265,0,0,2.25900737046827,0,0.572895513439397,13.748254587495,5.48066015816514,4.5323633843382,3.37511250115903,4.05289082901798,2.26571204492102,5.69536342927002,0.103787347584177,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,1.00179145989269,0,0,1.93684985162364,1.68946466582,4.68129052643987,2.05461561870606,1.03703806693937,2.73921167889929,2.01066925563694,0.999329285446988,0.607425802169478,5.59649502502517,2.05050407482854,0.822686601634433,5.51706547337439,0.17008658030214,0.0992909512008853,0.522399578277871,0.159992422793407,0,0,0,0,0.380046838912748,0,0.221730510655305,27.9413496322238,6.1506478758457,47.5445043046316,0,0.332469290716985,0,0,0,0,0.588231488031014,0,0.485510353031154,0,0.101376931219515,0,6.25913075478431,0.872100625521786,3.51497892375155,0.194429899074283,0.55994568650145,1.43752564364972,0.503347818173209,0,0,0.514518872071894,1.14613375975503,4.12537673821954,3.43937983461316,4.7609188134483,2.53532561402472,3.72728985276045,6.22506357277798,2.2497492932035,9.88866362566974,7.8152812644071,6.2916023208865,3.45796474789399,1.97010263386108,4.3201900266141,2.94454945891935,2.85650984403804,4.8591079009355,2.69479758272899,3.25874601462004,2.75765635983006,12.1127469099328,3.19218345212969,1.99688493233117,5.40733779693795,2.37867873366265,5.73004707612436,2.51264699101243,5.06486349028512,3.51435969886663,6.77645746589436,4.8406371471695,3.16879057903011,0.454357159999104,0.302286240427142,2.31891590961342,3.44169550792555,4.75979933595425,10.2543606411185,7.79731700937203,6.72040330646003,0,0,1.81850203222008,0.70667914902068,0,0,2.54805239706646,0,3.24736561516821,2.02687892380079,2.02209778005913,0.22836775943812,0,0,0,0,0,0,0,0.125666591329675,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0.180062129805349,0,0,0,0.0937017245597288,0.517406741478031,0.215567992932842,0,0.351902248327898,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0.568474235311454,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,18.0949540727127,7.07077388964322,0,0,0.160550589987792,0,0,0,0.315508219416257,1.17131623288992,2.58508077279359,0.955875191810208,2.00518806674155,1.69845918473299,0.809621403349789,1.46127928955656,1.97643888973262,0.321321316421807,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0.100826185136841,0.194915761479505,0.192423683280659,0.116876902181569,0,2.88581739386284,1.34570784914214,1.17519231454855,0,0.187682475451182,0.183151624267265,0,0,2.25900737046827,0,0.572895513439397,13.748254587495,5.48066015816514,4.5323633843382,3.37511250115903,4.05289082901798,2.26571204492102,5.69536342927002,0.103787347584177,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p1@ENSMUST00000082498 | |short_description=p1@ENSMUST00000082498 | ||
}} | }} |
Latest revision as of 19:44, 3 August 2015
Short description: | p1@ENSMUST00000082498 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000082498_5end |
Coexpression cluster: | MCL_coexpression_mm9:432 |
Association with transcript: | 0bp_to_ENSMUST00000082498_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 2.38e-36 | 97 |
somatic stem cell | 1.33e-35 | 91 |
multi fate stem cell | 1.33e-35 | 91 |
embryonic cell | 1.45e-24 | 70 |
neural cell | 1.70e-23 | 43 |
CNS neuron (sensu Vertebrata) | 2.94e-23 | 23 |
neuroblast (sensu Vertebrata) | 2.94e-23 | 23 |
neuron | 7.95e-23 | 33 |
neuronal stem cell | 7.95e-23 | 33 |
neuroblast | 7.95e-23 | 33 |
electrically signaling cell | 7.95e-23 | 33 |
ectodermal cell | 1.01e-22 | 44 |
neurectodermal cell | 1.01e-22 | 44 |
electrically responsive cell | 5.60e-21 | 39 |
electrically active cell | 5.60e-21 | 39 |
connective tissue cell | 4.09e-16 | 46 |
mesenchymal cell | 4.09e-16 | 46 |
motile cell | 5.55e-16 | 54 |
hematopoietic lineage restricted progenitor cell | 1.60e-10 | 25 |
myeloid lineage restricted progenitor cell | 1.88e-09 | 13 |
hematopoietic cell | 3.40e-07 | 32 |
hematopoietic oligopotent progenitor cell | 3.40e-07 | 32 |
hematopoietic stem cell | 3.40e-07 | 32 |
hematopoietic multipotent progenitor cell | 3.40e-07 | 32 |
myeloid cell | 3.68e-07 | 16 |
hepatocyte | 4.11e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
gray matter | 1.53e-18 | 34 |
central nervous system | 1.95e-18 | 73 |
nervous system | 1.29e-17 | 75 |
connective tissue | 4.09e-16 | 46 |
brain grey matter | 1.02e-13 | 29 |
regional part of telencephalon | 1.02e-13 | 29 |
telencephalon | 1.02e-13 | 29 |
regional part of nervous system | 4.19e-13 | 54 |
ectoderm-derived structure | 2.17e-11 | 95 |
ectoderm | 2.17e-11 | 95 |
presumptive ectoderm | 2.17e-11 | 95 |
neural tube | 1.46e-10 | 52 |
neural rod | 1.46e-10 | 52 |
future spinal cord | 1.46e-10 | 52 |
neural keel | 1.46e-10 | 52 |
cerebral cortex | 8.69e-10 | 21 |
cerebral hemisphere | 8.69e-10 | 21 |
pallium | 8.69e-10 | 21 |
regional part of forebrain | 1.19e-08 | 39 |
forebrain | 1.19e-08 | 39 |
future forebrain | 1.19e-08 | 39 |
neurectoderm | 1.36e-08 | 64 |
neural plate | 1.36e-08 | 64 |
presumptive neural plate | 1.36e-08 | 64 |
anterior neural tube | 2.73e-08 | 40 |
regional part of cerebral cortex | 3.60e-08 | 17 |
regional part of brain | 1.89e-07 | 46 |
occipital lobe | 3.44e-07 | 10 |
visual cortex | 3.44e-07 | 10 |
neocortex | 3.44e-07 | 10 |
brain | 3.61e-07 | 47 |
future brain | 3.61e-07 | 47 |
bone marrow | 8.90e-07 | 16 |