FFCP PHASE1:Hg19::chrY:10035343..10035356,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrY:10035343..10035356,+
|short_description=p@chrY:10035343..10035356,+
|description=CAGE_peak_at_chrY:10035343..10035356,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chrY:10035343..10035356,+ | |||
|coexpression_cluster_id=C2030 | |||
|description=CAGE_peak_at_chrY:10035343..10035356,+ | |||
|id=chrY:10035343..10035356,+ | |||
|ontology_enrichment_celltype=CL:0000183!1.36e-09!59;CL:0000192!1.48e-08!42;CL:0000514!1.48e-08!42;CL:0000187!2.70e-08!54;CL:0000222!8.76e-08!119;CL:0000680!1.02e-07!57;CL:0000056!1.02e-07!57;CL:0000355!1.02e-07!57;CL:0000359!4.78e-07!32;CL:0000393!6.89e-07!60;CL:0000211!6.89e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.15e-08;32!CL:0002539;1.65e-07;10!CL:0000192;1.79e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.69e-10,43;CL:0000514,1.69e-10,43;CL:0000359,3.33e-09,32;CL:0000187,2.78e-08,55;CL:0000680,5.16e-08,58;CL:0000056,5.16e-08,58;CL:0000355,5.16e-08,58;CL:0002539,6.11e-08,10;CL:0000222,2.97e-07,121;CL:0000393,8.39e-07,61;CL:0000211,8.39e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;1.79e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!7.42e-10!238;UBERON:0009142!7.42e-10!238;UBERON:0005256!8.15e-10!143;UBERON:0002385!8.00e-09!63;UBERON:0001015!8.00e-09!63;UBERON:0000383!8.00e-09!63;UBERON:0001134!8.42e-09!61;UBERON:0002036!8.42e-09!61;UBERON:0003082!8.42e-09!61;UBERON:0004535!4.15e-08!110;UBERON:0000490!7.46e-08!138;UBERON:0001009!8.58e-08!113;UBERON:0001135!4.33e-07!15;UBERON:0000486!5.96e-07!82;UBERON:0003914!6.21e-07!118;UBERON:0004290!7.77e-07!70;UBERON:0002100!7.90e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.16e-07;33!UBERON:0004571;1.16e-07;33!UBERON:0001135;1.19e-07;15!UBERON:0004237;1.65e-07;10!UBERON:0004695;1.65e-07;10!UBERON:0002111;1.65e-07;10!UBERON:0004178;1.65e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.70e-09,62;UBERON:0002036,2.70e-09,62;UBERON:0003082,2.70e-09,62;UBERON:0002049,2.72e-09,78;UBERON:0007798,2.72e-09,78;UBERON:0002385,3.66e-09,64;UBERON:0001015,3.66e-09,64;UBERON:0000383,3.66e-09,64;UBERON:0004573,9.53e-09,33;UBERON:0004571,9.53e-09,33;UBERON:0005256,1.25e-08,122;UBERON:0007503,1.38e-08,78;UBERON:0004535,1.54e-08,109;UBERON:0003104,1.78e-08,160;UBERON:0009142,1.78e-08,160;UBERON:0001009,1.94e-08,112;UBERON:0001135,3.75e-08,15;UBERON:0004237,6.11e-08,10;UBERON:0004695,6.11e-08,10;UBERON:0002111,6.11e-08,10;UBERON:0004178,6.11e-08,10;UBERON:0003081,1.88e-07,203;UBERON:0000055,3.79e-07,68;UBERON:0002329,3.95e-07,71;UBERON:0003059,3.95e-07,71;UBERON:0007282,3.95e-07,71;UBERON:0004290,3.95e-07,71;UBERON:0009618,3.95e-07,71;UBERON:0003914,4.20e-07,117;UBERON:0001637,7.13e-07,42;UBERON:0003509,7.13e-07,42;UBERON:0004572,7.13e-07,42;UBERON:0003077,7.38e-07,72;UBERON:0007285,7.38e-07,72 | |||
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|phase1_expression=0,0,0,0,4.46961094427288,5.23403114460221,0,0,0,1.72013755551056,5.58240934377942,2.18441372130172,1.84636884759917,1.73272894144065,1.32558950291166,8.74022690387308,5.42425075221579,8.76372108464848,3.90346239032406,1.10808952269109,1.22400414746552,2.19418305034661,1.71741592278634,2.18999080116615,0.753255837568817,0,0,0,0,0,0.77408061658038,6.43594857135249,0,3.32778609150109,1.31694240986513,0.568676929949686,0,1.10799081706375,0.802177789880567,1.51907609501096,2.23915474239924,0,0.77272670290256,0,0.755751887377619,0,2.32429036905685,2.05583944010913,0,0,4.35473201099471,0,0,0,0,0,1.63743690034707,0,0,1.92557416245656,0,0,1.79517291859469,0,0,2.26954089876456,0,0,2.08593167368081,0,0,4.05105399586321,0,1.90129757680748,1.4882300997553,0.838634582033504,0.786300418025466,0.450530678524519,0.803627933485401,0,0.79566670879636,0.730656615058536,0,0,0,0,0,0,0,0,0.569212969109448,2.34894875748376,0,0,0,2.10707267820062,0.983548850569165,15.7204305099666,0,1.33749196312542,0,0,5.84480185223734,0.111410456885174,2.94605907474837,1.99380505125259,2.43723477388514,1.28091319725675,1.69077151827842,0.986627427622057,0.276350017785848,0,2.37258501059297,2.94294910898684,6.27213142829861,1.35971211237079,0,0,2.02415753615602,0,0,0,0,0.127986611154418,0,0,0,2.01606743224732,5.61624411145365,1.30341963494519,12.1903433156981,0.670700859703636,0.767175371061182,0.722878304769133,5.51471701699479,2.02785126545153,9.54343136461319,6.32625331393427,1.22895262313288,2.88248216701333,0.614843499851882,0.785874452986276,4.37154345951051,1.85392221392215,0,0,2.12732736830184,0,0,0,3.9752481473341,0,0,2.26123176769604,0,0.825354125820202,1.67195973229448,1.8089173141853,0,2.67776490211736,0,0,0,0,1.62028389576352,0.625098097988558,0.898117490504679,0.788280363383256,9.19899824795299,11.3911879148175,0,0,0,2.61656431285521,0,0,0,0,0,2.80338800071154,0,0,0.933633106199299,0.538842688278752,0.326923806226917,1.66493170409425,0,1.87457145467037,0.624320153660641,0,0,0.352303495931295,0.485618833104395,0.421352420106746,0.408308342509787,1.10550885580591,0.723280468230358,1.18800285728205,6.67620709052104,2.73048408581408,5.03032699271367,0.673344455816265,1.00094815897571,0.554128230968366,0,5.21029252858333,1.50238058906597,1.24775401476023,0,0,1.90738711043606,0.600182192168805,0.721367704669072,1.03056216018252,2.41951913231067,2.19409231913646,0.68205903612839,1.51460264546469,1.10459878370759,1.2931684545505,0,0.806016785821122,1.01736355386293,0,0,0.573609190778008,0,0,0,0,0,0,3.12899064659632,0,0,1.39310378409594,0,1.18306800039844,0.674338760312407,0.964044119533928,1.7647035637183,0.435758888184812,1.18635309555548,0.539325232640658,1.56977172100277,0.769494313892781,1.4763109092493,1.40241773803446,1.2347220339942,1.47008711385542,5.07020139287323,0.982827216677626,0.590789906681404,0.441463099414651,0.737930631258681,1.71567810298526,1.42675371031213,0,0,0.370353780634118,0.977424915930974,1.03993478527958,0,0.695582429850461,1.6437217193015,0.433099343283221,4.62985512576611,2.28304982681518,0,0,2.70838706696137,1.40402559083543,0,0,0,0.708875486211932,0,0,0,0,0,0,0,0,0.126995788584338,1.52795370223311,12.8939191931052,1.71072446022705,0.205654985406647,3.00343057843917,0.857479297891735,0.560655421726804,0.87192013766656,0.7333828582095,0,17.8828222925941,5.071816515336,0,0,1.02882949704857,1.41849132023278,2.93064396917709,0.428933980974443,2.71310802695722,3.29296134712308,1.95441710576241,2.84313558994037,2.37585561880029,0,0,0,6.08118903205952,3.01354254859276,31.6250909224547,0,0,0,0,3.6985738059069,0,0,1.97030760201927,3.23441362289276,1.28343036279748,0.508189248444927,1.30139853857622,0,1.34013012267479,0.637938751653163,6.74106321552464,35.899375104483,0,0.36807447515742,1.00034104211935,0.542530047399471,0.623912584592421,0,0.473107245101804,1.17141414992713,0,50.0296508923167,2.0694614258501,2.65690239414175,0,0.955719759148911,1.76221041716467,3.43143423810856,1.24060815673732,2.37285620900479,0.533637789017222,4.24378600024763,0,1.5119514666484,0,0,0,0,0,3.53878626515936,0,0,0,0,0.519254429183621,0,0.725156697549733,3.80962293576241,0.644566922551274,1.03333003348146,0.728364672026868,1.44236856455367,0.451199612907412,0.616122696835318,5.49044838423799,2.92278449306521,1.16106791782163,1.13733384070897,1.19065593693561,0.863663664408557,15.4227252690289,1.35473218771926,6.02027728625824,1.52925763827023,2.49322802678617,2.68649705666614,0.219259876645935,0.261435451024901,1.02580050046556,1.96808787419823,0.650756789328606,1.13345112812495,0,0,1.14853107599234,20.1518676271322,4.82051789532479,1.54673149267395,0.924291702687866,0.460511024178389,0.551346289938122,1.18162269355101,2.0302337147992,0.596586391912706,0.801288320820636,0,1.15314040419064,1.27612712494584,2.12431339796655,3.71876439437829,1.88887408098384,6.970372701606,5.5446044431696,4.7907542728532,1.73986598415015,2.96518750566272,2.43312307461385,1.86079184679834,1.89827654831236,1.5250415513906,1.27948895655667,0.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| ||
|short_description=p@chrY:10035343..10035356,+ | |||
}} | }} |
Latest revision as of 09:59, 1 August 2015
Short description: | p@chrY:10035343..10035356, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrY:10035343..10035356, + |
Coexpression cluster: | C2030_Neutrophils_Monocytederived_Smooth_CD4_penis_seminal_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.69e-10 | 43 |
smooth muscle myoblast | 1.69e-10 | 43 |
vascular associated smooth muscle cell | 3.33e-09 | 32 |
muscle cell | 2.78e-08 | 55 |
muscle precursor cell | 5.16e-08 | 58 |
myoblast | 5.16e-08 | 58 |
multi-potent skeletal muscle stem cell | 5.16e-08 | 58 |
aortic smooth muscle cell | 6.11e-08 | 10 |
mesodermal cell | 2.97e-07 | 121 |
electrically responsive cell | 8.39e-07 | 61 |
electrically active cell | 8.39e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 2.70e-09 | 62 |
striated muscle tissue | 2.70e-09 | 62 |
myotome | 2.70e-09 | 62 |
vasculature | 2.72e-09 | 78 |
vascular system | 2.72e-09 | 78 |
muscle tissue | 3.66e-09 | 64 |
musculature | 3.66e-09 | 64 |
musculature of body | 3.66e-09 | 64 |
systemic artery | 9.53e-09 | 33 |
systemic arterial system | 9.53e-09 | 33 |
trunk mesenchyme | 1.25e-08 | 122 |
epithelial vesicle | 1.38e-08 | 78 |
cardiovascular system | 1.54e-08 | 109 |
mesenchyme | 1.78e-08 | 160 |
entire embryonic mesenchyme | 1.78e-08 | 160 |
circulatory system | 1.94e-08 | 112 |
smooth muscle tissue | 3.75e-08 | 15 |
blood vessel smooth muscle | 6.11e-08 | 10 |
arterial system smooth muscle | 6.11e-08 | 10 |
artery smooth muscle tissue | 6.11e-08 | 10 |
aorta smooth muscle tissue | 6.11e-08 | 10 |
lateral plate mesoderm | 1.88e-07 | 203 |
vessel | 3.79e-07 | 68 |
somite | 3.95e-07 | 71 |
presomitic mesoderm | 3.95e-07 | 71 |
presumptive segmental plate | 3.95e-07 | 71 |
dermomyotome | 3.95e-07 | 71 |
trunk paraxial mesoderm | 3.95e-07 | 71 |
epithelial tube | 4.20e-07 | 117 |
artery | 7.13e-07 | 42 |
arterial blood vessel | 7.13e-07 | 42 |
arterial system | 7.13e-07 | 42 |
paraxial mesoderm | 7.38e-07 | 72 |
presumptive paraxial mesoderm | 7.38e-07 | 72 |