FFCP PHASE1:Hg19::chrX:9881045..9881073,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=357 | |EntrezGene=entrezgene:357 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=630 | |HGNC=HGNC:630 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=C9IZC6,B3KU73 | |UniProt=uniprot:C9IZC6,uniprot:B3KU73 | ||
|association_with_transcript=322bp_to_ENST00000452575,ENST00000540923,uc004csw.1_5end | |association_with_transcript=322bp_to_ENST00000452575,ENST00000540923,uc004csw.1_5end | ||
|cluster_id=chrX:9881045..9881073,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_7_at_SHROOM2_5end | |description=CAGE_peak_7_at_SHROOM2_5end |
Revision as of 09:57, 1 August 2015
Short description: | p7@SHROOM2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SHROOM2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 322bp_to_ENST00000452575, ENST00000540923, uc004csw.1_5end |
EntrezGene: | 357 |
HGNC: | 630 |
UniProt: | C9IZC6B3KU73 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p7@SHROOM2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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neocortex | 5.00e-116 | 20 |
regional part of cerebral cortex | 1.12e-105 | 22 |
cerebral hemisphere | 1.87e-99 | 32 |
telencephalon | 1.41e-93 | 34 |
cerebral cortex | 3.89e-93 | 25 |
pallium | 3.89e-93 | 25 |
regional part of telencephalon | 6.08e-90 | 32 |
brain grey matter | 1.29e-84 | 34 |
gray matter | 1.29e-84 | 34 |
regional part of forebrain | 2.04e-77 | 41 |
Showing 1 to 10 of 63 entries