FFCP PHASE1:Hg19::chrX:50024278..50024293,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:50024278..50024293,+ | |||
|description=CAGE_peak_at_chrX:50024278..50024293,+ | |description=CAGE_peak_at_chrX:50024278..50024293,+ | ||
|id=chrX:50024278..50024293,+ | |id=chrX:50024278..50024293,+ | ||
|ontology_enrichment_celltype=CL:0000242!2.67e-08!2;CL:0000082!2.59e-07!19 | |ontology_enrichment_celltype=CL:0000242!2.67e-08!2;CL:0000082!2.59e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0000322;1.35e-08;3 | |ontology_enrichment_celltype_v019=CL:0000322;1.35e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.21e-08,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1325!7.57e-19!7;DOID:3904!7.57e-19!7;DOID:5409!4.23e-15!4;DOID:3905!8.27e-15!9;DOID:305!5.44e-10!106;DOID:1324!4.01e-09!15;DOID:0050687!6.41e-09!143;DOID:4468!1.20e-08!2;DOID:0050615!1.38e-08!16;DOID:3910!1.73e-08!2;DOID:162!2.10e-07!235;DOID:14566!3.21e-07!239 | |ontology_enrichment_disease=DOID:1325!7.57e-19!7;DOID:3904!7.57e-19!7;DOID:5409!4.23e-15!4;DOID:3905!8.27e-15!9;DOID:305!5.44e-10!106;DOID:1324!4.01e-09!15;DOID:0050687!6.41e-09!143;DOID:4468!1.20e-08!2;DOID:0050615!1.38e-08!16;DOID:3910!1.73e-08!2;DOID:162!2.10e-07!235;DOID:14566!3.21e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:1325;1.91e-13;7!DOID:3904;1.91e-13;7!DOID:4468;1.48e-12;2!DOID:3910;3.06e-12;2!DOID:3905;1.12e-10;9!DOID:1324;9.09e-07;15!DOID:5409;9.36e-07;4 | |ontology_enrichment_disease_v019=DOID:1325;1.91e-13;7!DOID:3904;1.91e-13;7!DOID:4468;1.48e-12;2!DOID:3910;3.06e-12;2!DOID:3905;1.12e-10;9!DOID:1324;9.09e-07;15!DOID:5409;9.36e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:1325,1.69e-13,7;DOID:3904,1.69e-13,7;DOID:4468,1.48e-12,2;DOID:3910,2.59e-12,2;DOID:3905,1.02e-10,9;DOID:305,1.75e-07,106;DOID:0050687,2.04e-07,143;DOID:1324,8.58e-07,15;DOID:5409,9.11e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0004903!1.73e-08!2;UBERON:0002173!1.73e-08!2;UBERON:0002186!1.73e-08!2;UBERON:0000473!6.18e-08!8;UBERON:0004802!2.59e-07!19;UBERON:0000115!2.59e-07!19 | |ontology_enrichment_uberon=UBERON:0004903!1.73e-08!2;UBERON:0002173!1.73e-08!2;UBERON:0002186!1.73e-08!2;UBERON:0000473!6.18e-08!8;UBERON:0004802!2.59e-07!19;UBERON:0000115!2.59e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;3.06e-12;2!UBERON:0002173;3.06e-12;2!UBERON:0002186;3.06e-12;2!UBERON:0002369;9.31e-09;3!UBERON:0001235;9.31e-09;3!UBERON:0006858;9.31e-09;3!UBERON:0004821;1.35e-08;3!UBERON:0007499;1.35e-08;3!UBERON:0003215;1.35e-08;3!UBERON:0010368;1.35e-08;3!UBERON:0009911;1.35e-08;3!UBERON:0002299;1.35e-08;3!UBERON:0006524;1.35e-08;3!UBERON:0008874;1.35e-08;3!UBERON:0002169;1.35e-08;3!UBERON:0004894;1.35e-08;3!UBERON:0009856;9.36e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0004903;3.06e-12;2!UBERON:0002173;3.06e-12;2!UBERON:0002186;3.06e-12;2!UBERON:0002369;9.31e-09;3!UBERON:0001235;9.31e-09;3!UBERON:0006858;9.31e-09;3!UBERON:0004821;1.35e-08;3!UBERON:0007499;1.35e-08;3!UBERON:0003215;1.35e-08;3!UBERON:0010368;1.35e-08;3!UBERON:0009911;1.35e-08;3!UBERON:0002299;1.35e-08;3!UBERON:0006524;1.35e-08;3!UBERON:0008874;1.35e-08;3!UBERON:0002169;1.35e-08;3!UBERON:0004894;1.35e-08;3!UBERON:0009856;9.36e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,2.59e-12,2;UBERON:0002173,2.59e-12,2;UBERON:0002186,2.59e-12,2;UBERON:0002369,9.66e-09,3;UBERON:0001235,9.66e-09,3;UBERON:0006858,9.66e-09,3;UBERON:0004821,1.21e-08,3;UBERON:0003215,1.21e-08,3;UBERON:0010368,1.21e-08,3;UBERON:0009911,1.21e-08,3;UBERON:0002299,1.21e-08,3;UBERON:0006524,1.21e-08,3;UBERON:0008874,1.21e-08,3;UBERON:0002169,1.21e-08,3;UBERON:0004894,1.21e-08,3 | |||
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|short_description=p@chrX:50024278..50024293,+ | |short_description=p@chrX:50024278..50024293,+ | ||
}} | }} |
Latest revision as of 08:43, 1 August 2015
Short description: | p@chrX:50024278..50024293, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:50024278..50024293, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.21e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 2.59e-12 | 2 |
alveolar duct | 2.59e-12 | 2 |
bronchiole | 2.59e-12 | 2 |
adrenal gland | 9.66e-09 | 3 |
adrenal cortex | 9.66e-09 | 3 |
adrenal/interrenal gland | 9.66e-09 | 3 |
pulmonary alveolus epithelium | 1.21e-08 | 3 |
alveolus | 1.21e-08 | 3 |
pulmonary lobule | 1.21e-08 | 3 |
lobule | 1.21e-08 | 3 |
alveolus of lung | 1.21e-08 | 3 |
alveolar system | 1.21e-08 | 3 |
pulmonary acinus | 1.21e-08 | 3 |
alveolar sac | 1.21e-08 | 3 |
alveolar wall | 1.21e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchus cancer | 1.69e-13 | 7 |
bronchogenic carcinoma | 1.69e-13 | 7 |
clear cell adenocarcinoma | 1.48e-12 | 2 |
lung adenocarcinoma | 2.59e-12 | 2 |
lung carcinoma | 1.02e-10 | 9 |
carcinoma | 1.75e-07 | 106 |
cell type cancer | 2.04e-07 | 143 |
lung cancer | 8.58e-07 | 15 |
lung small cell carcinoma | 9.11e-07 | 4 |