FFCP PHASE1:Hg19::chrX:47446099..47446146,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:47446099..47446146,+ | |||
|coexpression_cluster_id=C609 | |||
|description=CAGE_peak_at_chrX:47446099..47446146,+ | |description=CAGE_peak_at_chrX:47446099..47446146,+ | ||
|id=chrX:47446099..47446146,+ | |id=chrX:47446099..47446146,+ | ||
|ontology_enrichment_celltype=CL:0000055!9.60e-25!180;CL:0000048!9.44e-17!430;CL:0000057!3.00e-16!75;CL:0000723!1.49e-15!436;CL:0000680!5.39e-15!57;CL:0000056!5.39e-15!57;CL:0000355!5.39e-15!57;CL:0000034!2.15e-14!444;CL:0000187!1.07e-13!54;CL:0000183!2.01e-12!59;CL:0000192!1.90e-11!42;CL:0000514!1.90e-11!42;CL:0000359!6.48e-11!32;CL:0000393!8.43e-11!60;CL:0000211!8.43e-11!60;CL:0002371!8.84e-10!591;CL:0000144!1.85e-08!625;CL:0002320!6.56e-08!365;CL:0002334!1.22e-07!12;CL:0000222!1.40e-07!119;CL:0002494!3.19e-07!16;CL:0000548!4.83e-07!679;CL:0000004!4.83e-07!679;CL:0000255!4.83e-07!679;CL:0000134!6.14e-07!358 | |ontology_enrichment_celltype=CL:0000055!9.60e-25!180;CL:0000048!9.44e-17!430;CL:0000057!3.00e-16!75;CL:0000723!1.49e-15!436;CL:0000680!5.39e-15!57;CL:0000056!5.39e-15!57;CL:0000355!5.39e-15!57;CL:0000034!2.15e-14!444;CL:0000187!1.07e-13!54;CL:0000183!2.01e-12!59;CL:0000192!1.90e-11!42;CL:0000514!1.90e-11!42;CL:0000359!6.48e-11!32;CL:0000393!8.43e-11!60;CL:0000211!8.43e-11!60;CL:0002371!8.84e-10!591;CL:0000144!1.85e-08!625;CL:0002320!6.56e-08!365;CL:0002334!1.22e-07!12;CL:0000222!1.40e-07!119;CL:0002494!3.19e-07!16;CL:0000548!4.83e-07!679;CL:0000004!4.83e-07!679;CL:0000255!4.83e-07!679;CL:0000134!6.14e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.12e-12;32!CL:0000192;8.32e-11;43!CL:0000860;1.33e-10;33!CL:0002057;1.33e-10;33!CL:0002334;1.43e-10;12!CL:0002494;4.23e-09;16!CL:0000187;2.36e-08;55!CL:0000057;8.06e-08;73!CL:0000499;9.03e-08;28!CL:0000393;1.78e-07;61!CL:0000211;1.78e-07;61!CL:0002539;2.72e-07;10!CL:0002620;6.86e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,5.88e-28,427;CL:0000723,9.24e-27,433;CL:0000034,3.19e-25,441;CL:0000057,5.06e-20,76;CL:0000680,1.45e-16,58;CL:0000056,1.45e-16,58;CL:0000355,1.45e-16,58;CL:0000187,8.60e-15,55;CL:0002320,1.33e-14,361;CL:0000134,7.18e-14,354;CL:0000192,7.32e-14,43;CL:0000514,7.32e-14,43;CL:0000393,7.85e-13,61;CL:0000211,7.85e-13,61;CL:0000359,1.07e-12,32;CL:0002334,1.42e-10,12;CL:0000219,3.51e-10,386;CL:0002494,4.19e-09,16;CL:0000499,8.95e-08,28;CL:0000860,9.95e-08,42;CL:0002057,9.95e-08,42;CL:0002539,2.15e-07,10;CL:0002620,4.89e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;8.32e-11;43!CL:0000355;1.49e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!2.89e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.30e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.45e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0001134!2.55e-12!61;UBERON:0002036!2.55e-12!61;UBERON:0003082!2.55e-12!61;UBERON:0002204!4.24e-12!167;UBERON:0002385!5.65e-12!63;UBERON:0001015!5.65e-12!63;UBERON:0000383!5.65e-12!63;UBERON:0004290!3.22e-11!70;UBERON:0000926!8.61e-11!448;UBERON:0004120!8.61e-11!448;UBERON:0006603!8.61e-11!448;UBERON:0004872!1.56e-10!84;UBERON:0000914!2.53e-10!83;UBERON:0002329!2.53e-10!83;UBERON:0003077!2.53e-10!83;UBERON:0003059!2.53e-10!83;UBERON:0007282!2.53e-10!83;UBERON:0009618!2.53e-10!83;UBERON:0007285!2.53e-10!83;UBERON:0002049!2.23e-09!79;UBERON:0007798!2.23e-09!79;UBERON:0004535!7.91e-09!110;UBERON:0001009!9.34e-09!113;UBERON:0001637!1.40e-08!42;UBERON:0003509!1.40e-08!42;UBERON:0004572!1.40e-08!42;UBERON:0000486!1.50e-08!82;UBERON:0002384!2.06e-08!375;UBERON:0000948!2.61e-08!24;UBERON:0005498!2.61e-08!24;UBERON:0004140!2.61e-08!24;UBERON:0009881!2.61e-08!24;UBERON:0004141!2.61e-08!24;UBERON:0003084!2.61e-08!24;UBERON:0007005!2.61e-08!24;UBERON:0004139!2.61e-08!24;UBERON:0004291!2.61e-08!24;UBERON:0004573!4.73e-08!33;UBERON:0004571!4.73e-08!33;UBERON:0000055!6.66e-08!69;UBERON:0007100!9.35e-08!27;UBERON:0001981!1.40e-07!60;UBERON:0007500!1.40e-07!60;UBERON:0004537!1.40e-07!60;UBERON:0006965!1.40e-07!60 | |ontology_enrichment_uberon=UBERON:0001134!2.55e-12!61;UBERON:0002036!2.55e-12!61;UBERON:0003082!2.55e-12!61;UBERON:0002204!4.24e-12!167;UBERON:0002385!5.65e-12!63;UBERON:0001015!5.65e-12!63;UBERON:0000383!5.65e-12!63;UBERON:0004290!3.22e-11!70;UBERON:0000926!8.61e-11!448;UBERON:0004120!8.61e-11!448;UBERON:0006603!8.61e-11!448;UBERON:0004872!1.56e-10!84;UBERON:0000914!2.53e-10!83;UBERON:0002329!2.53e-10!83;UBERON:0003077!2.53e-10!83;UBERON:0003059!2.53e-10!83;UBERON:0007282!2.53e-10!83;UBERON:0009618!2.53e-10!83;UBERON:0007285!2.53e-10!83;UBERON:0002049!2.23e-09!79;UBERON:0007798!2.23e-09!79;UBERON:0004535!7.91e-09!110;UBERON:0001009!9.34e-09!113;UBERON:0001637!1.40e-08!42;UBERON:0003509!1.40e-08!42;UBERON:0004572!1.40e-08!42;UBERON:0000486!1.50e-08!82;UBERON:0002384!2.06e-08!375;UBERON:0000948!2.61e-08!24;UBERON:0005498!2.61e-08!24;UBERON:0004140!2.61e-08!24;UBERON:0009881!2.61e-08!24;UBERON:0004141!2.61e-08!24;UBERON:0003084!2.61e-08!24;UBERON:0007005!2.61e-08!24;UBERON:0004139!2.61e-08!24;UBERON:0004291!2.61e-08!24;UBERON:0004573!4.73e-08!33;UBERON:0004571!4.73e-08!33;UBERON:0000055!6.66e-08!69;UBERON:0007100!9.35e-08!27;UBERON:0001981!1.40e-07!60;UBERON:0007500!1.40e-07!60;UBERON:0004537!1.40e-07!60;UBERON:0006965!1.40e-07!60 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;8.56e-12;33!UBERON:0004571;8.56e-12;33!UBERON:0000948;1.58e-09;22!UBERON:0001637;2.46e-09;42!UBERON:0003509;2.46e-09;42!UBERON:0004572;2.46e-09;42!UBERON:0007100;1.06e-07;25!UBERON:0004457;1.38e-07;9!UBERON:0000042;1.38e-07;9!UBERON:0004237;2.72e-07;10!UBERON:0004695;2.72e-07;10!UBERON:0002111;2.72e-07;10!UBERON:0004178;2.72e-07;10!UBERON:0003688;3.85e-07;6!UBERON:0002358;3.85e-07;6!UBERON:0003684;3.85e-07;6!UBERON:0001178;3.85e-07;6!UBERON:0001013;4.28e-07;14 | |||
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|phase1_expression=5.08699461957559,0.642301571672949,7.75249222527841,5.00366491765652,4.02264984984559,13.0850778615055,0,8.2123583545488,3.65659879479774,3.93174298402414,0,0.218441372130172,0,0.866364470720326,1.98838425436749,4.70627602516243,1.20538905604795,1.46062018077475,1.46379839637152,1.72369481307503,0.408001382488506,0,0.286235987131057,0.273748850145768,0.251085279189606,0.0764134057479513,0,0.0787107813136792,0,0,0.154816123316076,0.919421224478927,0.30120591877825,0.739508020333575,0,0,0,0,0,0.217010870715852,0,0.647787332037959,0.77272670290256,1.89017710413434,2.26725566213286,1.94067248950253,2.78914844286822,2.05583944010913,1.85823822537062,3.16461631554365,0.768482119587302,1.18241114944293,2.41321976515633,3.22742341791913,1.35426486594342,5.27078550719293,4.36649840092553,2.69668181334102,9.79468455586888,3.53021929783703,7.67204550958849,1.31940520074686,0.997318288108159,0.852449501065388,4.93355705668593,1.13477044938228,4.9825779919646,3.76872997885115,2.60741459210101,1.52032191293582,6.05399502633369,2.20966581592539,2.84816148696796,0.845021145247767,0.212604299965044,0,0.112328631146495,0.150176892841506,0,0,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0.334231370655521,0,0,0.270803863765016,0.384273959177026,0.390178042679635,0,1.10540007114339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,26.8187552945358,13.4140171940727,1.66221330396589,11.5660528763061,2.00535164254356,2.31754430337318,3.9764297352555,3.89307896242109,0.567208902984407,1.10864698731282,0.614843499851882,0,0.728590576585084,0.370784442784429,0,0.174129737299267,0,0,0,0,0,0,0,0,1.25849830862972,0.275118041940067,0,0,0.35576626268671,0.33472061276467,1.20848795132744,3.04108842287405,0,0,0,0.17859945656816,0,0.225222960966644,0,0.949265659568129,0.183201743930407,0,0,0,16.8970463576408,2.78587125662075,2.51577443545116,10.3261183469573,4.61068896857864,1.12135520028461,1.06748995729705,1.97334038733728,6.53543174339509,0.67355336034844,3.26923806226917,1.36221684880438,0.576175924479999,0.234321431833797,2.18512053781224,2.2818872861778,4.33401173600223,0.117434498643765,0.161872944368132,0.561803226808994,1.42907919878425,0,0.826606249406124,2.37600571456411,1.48360157567134,1.82032272387605,7.18618141816238,0,0.125118519871964,0.554128230968366,1.75591048352335,1.22595118319608,3.30523729594513,2.1552114800404,7.17558542755448,2.34913127700424,2.7551147150743,8.70264178644767,1.54578793857658,3.34932702059318,1.8611685633159,3.71307930930786,1.85130309806277,4.03894038790583,3.31379635112278,1.2931684545505,4.26011511019937,0.806016785821122,1.3564847384839,0,0.272746120590835,0,0.121973706129595,0.132529768321485,0.348581828608555,0.207322110030741,0,0,0,0,0,0,0.721879481669586,0.118306800039844,0.842923450390509,0.723033089650446,0.220587945464788,0,0.474541238222193,0.539325232640658,0.588664395376038,0,0.738155454624648,0,3.2925920906512,2.94017422771084,0,0,1.77236972004421,0,0,8.23525489432923,0.109750285408626,0,0,0.185176890317059,0,3.11980435583874,2.88662684050547,0,1.52631302506568,0.577465791044295,0.462985512576611,0.380508304469197,0,0,0,0.468008530278475,0,0,0,0,0.268675568108545,0,0,0,0.088048434013226,0.414656231081544,0.432359860250884,0,0,0.763976851116555,0,0,0.102827492703324,0.300343057843917,0,0.112131084345361,1.30788020649984,0.36669142910475,13.1857150072933,3.57656445851882,22.823174319012,1.32969058292435,1.04007436911366,1.54324424557285,0,1.0656887160644,2.00169191121407,9.22456729165453,0,0.65147236858747,0.710783897485092,1.58390374586686,0.301439377059586,0.871533458600294,1.09970290300263,0,0.502257091432126,0,0.479249710983165,0,2.85273810081437,4.1986578933598,3.08214483825575,3.04403637507822,0.224170287987055,0,0,0.128343036279748,1.01637849688985,0,1.54657762555539,0,0,0,0,0.414415513436035,1.34960640891054,3.50119364741774,1.35632511849868,0.415941723061614,1.60586089917446,0.630809660135739,6.32563640960651,6.62081419400982,0,3.10419213877515,0.664225598535437,0.368738337083406,3.47534457872331,0.979005787313703,0.686286847621712,0,0,0,0,0,1.20956117331872,6.94701861892575,4.75732117192994,2.24528075546459,34.8538485975507,8.69902323413396,14.1551450606375,5.93672265779964,1.85051632563187,6.74734556189883,2.13530605635904,4.15403543346897,3.02146983995894,0,0.200506470303285,0.368323955743585,8.03701137152247,4.55227920016793,3.2781103739856,0,0.0770153371044148,0,0,0.844413031143006,0,0.340187410553031,0.215915916102139,0,0,0,0.254876273045038,0,0.447749509444357,0,0,0.256450125116389,0.328014645699706,0,0.206082023295445,0.366277859273374,0.330037999682352,0,0,3.21367859688319,0.096670718292122,2.00263202249038,1.07452572308291,0.689182862422653,1.6113036730241,0.435050081742686,0.852266274161009,0.534192213880424,0.495854746082934,0.384380134730212,0.255225424989168,0.10115778085555,1.39453664789186,42.4996668221364,2.7881490806424,4.62050370264133,4.25844824253617,5.21959795245044,3.7064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| ||
|short_description=p@chrX:47446099..47446146,+ | |short_description=p@chrX:47446099..47446146,+ | ||
}} | }} |
Latest revision as of 08:25, 1 August 2015
Short description: | p@chrX:47446099..47446146, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:47446099..47446146, + |
Coexpression cluster: | C609_Smooth_mesenchymal_Preadipocyte_Cardiac_Fibroblast_Osteoblast_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 5.88e-28 | 427 |
somatic stem cell | 9.24e-27 | 433 |
stem cell | 3.19e-25 | 441 |
fibroblast | 5.06e-20 | 76 |
muscle precursor cell | 1.45e-16 | 58 |
myoblast | 1.45e-16 | 58 |
multi-potent skeletal muscle stem cell | 1.45e-16 | 58 |
muscle cell | 8.60e-15 | 55 |
connective tissue cell | 1.33e-14 | 361 |
mesenchymal cell | 7.18e-14 | 354 |
smooth muscle cell | 7.32e-14 | 43 |
smooth muscle myoblast | 7.32e-14 | 43 |
electrically responsive cell | 7.85e-13 | 61 |
electrically active cell | 7.85e-13 | 61 |
vascular associated smooth muscle cell | 1.07e-12 | 32 |
preadipocyte | 1.42e-10 | 12 |
motile cell | 3.51e-10 | 386 |
cardiocyte | 4.19e-09 | 16 |
stromal cell | 8.95e-08 | 28 |
classical monocyte | 9.95e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.95e-08 | 42 |
aortic smooth muscle cell | 2.15e-07 | 10 |
skin fibroblast | 4.89e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.45e-10 | 14 |