FFCP PHASE1:Hg19::chrX:46182516..46182522,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chrX:46182516..46182522,- to FFCP PHASE1:Hg19::chrX:46182516..46182522,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chrX:46182516..46182522,- | |||
|description=CAGE_peak_at_chrX:46182516..46182522,- | |||
|id=chrX:46182516..46182522,- | |||
|ontology_enrichment_celltype=CL:0002076!3.77e-09!43;CL:0000066!5.91e-09!254;CL:1001319!2.50e-08!1;CL:1000600!2.50e-08!1;CL:0002251!6.44e-08!21;CL:0002563!6.94e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0000322;2.07e-12;3!CL:0000082;6.04e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,2.07e-12,3;CL:0000082,5.94e-08,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!4.86e-23!14;DOID:305!1.48e-17!106;DOID:0050687!2.63e-17!143;DOID:299!5.90e-13!25;DOID:162!1.51e-12!235;DOID:3119!1.68e-12!14;DOID:14566!3.41e-12!239;DOID:3151!2.33e-08!1;DOID:3149!2.33e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:3493;5.48e-18;2!DOID:3910;6.48e-18;2!DOID:1324;8.28e-10;15!DOID:0050615;2.95e-09;16!DOID:3908;5.73e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,5.48e-18,2;DOID:3910,6.48e-18,2;DOID:1324,8.10e-10,15;DOID:0050615,2.89e-09,16;DOID:3908,5.73e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000344!4.48e-14!12;UBERON:0003350!4.05e-13!5;UBERON:0000060!1.35e-09!12;UBERON:0004913!1.52e-08!1;UBERON:0003703!1.52e-08!1;UBERON:0001174!1.52e-08!1;UBERON:0004914!1.52e-08!1;UBERON:0004645!2.50e-08!1;UBERON:0001256!2.50e-08!1;UBERON:0001259!2.50e-08!1;UBERON:0001052!3.97e-08!4;UBERON:0001242!6.94e-08!4;UBERON:0001262!6.94e-08!4;UBERON:0004786!6.94e-08!4;UBERON:0004808!6.94e-08!4;UBERON:0001277!6.94e-08!4;UBERON:0003343!1.47e-07!4;UBERON:0004785!1.47e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;6.48e-18;2!UBERON:0002173;6.48e-18;2!UBERON:0002186;6.48e-18;2!UBERON:0004821;2.07e-12;3!UBERON:0007499;2.07e-12;3!UBERON:0003215;2.07e-12;3!UBERON:0010368;2.07e-12;3!UBERON:0009911;2.07e-12;3!UBERON:0002299;2.07e-12;3!UBERON:0006524;2.07e-12;3!UBERON:0008874;2.07e-12;3!UBERON:0002169;2.07e-12;3!UBERON:0004894;2.07e-12;3!UBERON:0009856;1.22e-09;4!UBERON:0001052;1.38e-09;4!UBERON:0002346;1.38e-09;4!UBERON:0000923;1.38e-09;4!UBERON:0010316;1.38e-09;4!UBERON:0005291;1.38e-09;4!UBERON:0004802;6.04e-08;19!UBERON:0000115;6.04e-08;19!UBERON:0002050;6.34e-08;5!UBERON:0005423;6.34e-08;5!UBERON:0004907;6.34e-08;5!UBERON:0002048;5.49e-07;22!UBERON:0004807;5.49e-07;22!UBERON:0000117;5.49e-07;22!UBERON:0000171;5.49e-07;22!UBERON:0000170;5.49e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,6.48e-18,2;UBERON:0002173,6.48e-18,2;UBERON:0002186,6.48e-18,2;UBERON:0004821,2.07e-12,3;UBERON:0003215,2.07e-12,3;UBERON:0010368,2.07e-12,3;UBERON:0009911,2.07e-12,3;UBERON:0002299,2.07e-12,3;UBERON:0006524,2.07e-12,3;UBERON:0008874,2.07e-12,3;UBERON:0002169,2.07e-12,3;UBERON:0004894,2.07e-12,3;UBERON:0001052,1.32e-09,4;UBERON:0004802,5.94e-08,19;UBERON:0000115,5.94e-08,19;UBERON:0004907,6.13e-08,5;UBERON:0002048,5.40e-07,22;UBERON:0000117,5.40e-07,22;UBERON:0000171,5.40e-07,22;UBERON:0000170,5.40e-07,22;UBERON:0005597,5.40e-07,22;UBERON:0000118,5.40e-07,22 | |||
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|short_description=p@chrX:46182516..46182522,- | |||
}} | }} |
Latest revision as of 08:15, 1 August 2015
Short description: | p@chrX:46182516..46182522, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:46182516..46182522, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 2.07e-12 | 3 |
epithelial cell of lung | 5.94e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 6.48e-18 | 2 |
alveolar duct | 6.48e-18 | 2 |
bronchiole | 6.48e-18 | 2 |
pulmonary alveolus epithelium | 2.07e-12 | 3 |
alveolus | 2.07e-12 | 3 |
pulmonary lobule | 2.07e-12 | 3 |
lobule | 2.07e-12 | 3 |
alveolus of lung | 2.07e-12 | 3 |
alveolar system | 2.07e-12 | 3 |
pulmonary acinus | 2.07e-12 | 3 |
alveolar sac | 2.07e-12 | 3 |
alveolar wall | 2.07e-12 | 3 |
rectum | 1.32e-09 | 4 |
respiratory tract epithelium | 5.94e-08 | 19 |
lung epithelium | 5.94e-08 | 19 |
lower digestive tract | 6.13e-08 | 5 |
lung | 5.40e-07 | 22 |
respiratory tube | 5.40e-07 | 22 |
respiration organ | 5.40e-07 | 22 |
pair of lungs | 5.40e-07 | 22 |
lung primordium | 5.40e-07 | 22 |
lung bud | 5.40e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 5.48e-18 | 2 |
lung adenocarcinoma | 6.48e-18 | 2 |
lung cancer | 8.10e-10 | 15 |
respiratory system cancer | 2.89e-09 | 16 |
non-small cell lung carcinoma | 5.73e-08 | 5 |