FFCP PHASE1:Hg19::chrX:4463037..4463062,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:4463037..4463062,- | |||
|coexpression_cluster_id=C322 | |||
|description=CAGE_peak_at_chrX:4463037..4463062,- | |description=CAGE_peak_at_chrX:4463037..4463062,- | ||
|id=chrX:4463037..4463062,- | |id=chrX:4463037..4463062,- | ||
|ontology_enrichment_celltype=CL:0002178!3.36e-13!3;CL:0002150!8.87e-13!3;CL:0000861!8.87e-13!3;CL:0000066!1.86e-07!254 | |ontology_enrichment_celltype=CL:0002178!3.36e-13!3;CL:0002150!8.87e-13!3;CL:0000861!8.87e-13!3;CL:0000066!1.86e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002178;9.90e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,9.90e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0007123;8.09e-24;5 | |||
|ontology_enrichment_disease=DOID:0050687!1.33e-13!143;DOID:305!2.78e-12!106;DOID:3112!7.40e-11!1;DOID:6193!1.08e-10!1;DOID:162!1.38e-09!235;DOID:14566!2.51e-09!239 | |||
|ontology_enrichment_disease_v019=DOID:3112;9.98e-30;1!DOID:6193;2.37e-29;1!DOID:3350;2.05e-15;2!DOID:3493;2.05e-15;2!DOID:299;6.47e-11;25!DOID:3119;4.75e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,9.99e-30,1;DOID:6193,3.16e-29,1;DOID:3493,2.05e-15,2;DOID:3350,2.37e-15,2;DOID:299,6.26e-11,25;DOID:3119,4.38e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.81e-16!9;UBERON:0007195!1.19e-10!1;UBERON:0001282!1.73e-10!1;UBERON:0009842!1.73e-10!1;UBERON:0003704!1.73e-10!1;UBERON:0001171!1.73e-10!1;UBERON:0001172!1.73e-10!1;UBERON:0002394!3.79e-10!4;UBERON:0003928!3.79e-10!4;UBERON:0002046!1.52e-08!5;UBERON:0004117!1.52e-08!5;UBERON:0007689!1.52e-08!5;UBERON:0007123!1.52e-08!5;UBERON:0003091!1.52e-08!5;UBERON:0001557!1.05e-07!19;UBERON:0001007!1.06e-07!155;UBERON:0001555!1.06e-07!155;UBERON:0007026!1.06e-07!155;UBERON:0004119!6.91e-07!169;UBERON:0000925!6.91e-07!169;UBERON:0006595!6.91e-07!169 | |ontology_enrichment_uberon=UBERON:0001737!4.81e-16!9;UBERON:0007195!1.19e-10!1;UBERON:0001282!1.73e-10!1;UBERON:0009842!1.73e-10!1;UBERON:0003704!1.73e-10!1;UBERON:0001171!1.73e-10!1;UBERON:0001172!1.73e-10!1;UBERON:0002394!3.79e-10!4;UBERON:0003928!3.79e-10!4;UBERON:0002046!1.52e-08!5;UBERON:0004117!1.52e-08!5;UBERON:0007689!1.52e-08!5;UBERON:0007123!1.52e-08!5;UBERON:0003091!1.52e-08!5;UBERON:0001557!1.05e-07!19;UBERON:0001007!1.06e-07!155;UBERON:0001555!1.06e-07!155;UBERON:0007026!1.06e-07!155;UBERON:0004119!6.91e-07!169;UBERON:0000925!6.91e-07!169;UBERON:0006595!6.91e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;2.37e-29;1!UBERON:0002046;8.09e-24;5!UBERON:0001052;2.26e-08;4!UBERON:0000945;6.04e-07;5!UBERON:0010039;6.04e-07;5!UBERON:0004907;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,4.20e-29,1;UBERON:0002046,8.09e-24,5;UBERON:0004117,8.09e-24,5;UBERON:0007689,8.09e-24,5;UBERON:0007123,8.09e-24,5;UBERON:0003091,8.09e-24,5;UBERON:0009722,2.07e-11,11;UBERON:0007690,2.07e-11,11;UBERON:0001052,1.96e-08,4;UBERON:0008814,2.44e-07,18;UBERON:0004907,5.38e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.220587945464788,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68426486367398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718946809178615,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,1.37588825977293,0.19351266257817,0,0.164230914106418,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.09429793775242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333694205676207,0,0,1.96190514319652,0,0,0,0,0,0.697448552208751,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47225350422864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.84004361741742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.220587945464788,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68426486367398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718946809178615,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,1.37588825977293,0.19351266257817,0,0.164230914106418,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.09429793775242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333694205676207,0,0,1.96190514319652,0,0,0,0,0,0.697448552208751,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47225350422864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.84004361741742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chrX:4463037..4463062,- | |short_description=p@chrX:4463037..4463062,- | ||
}} | }} |
Latest revision as of 08:09, 1 August 2015
Short description: | p@chrX:4463037..4463062, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:4463037..4463062, - |
Coexpression cluster: | C322_thyroid_anaplastic_gastric_testis_papillary_fibrous_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 9.90e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 4.20e-29 | 1 |
thyroid gland | 8.09e-24 | 5 |
pharyngeal pouch | 8.09e-24 | 5 |
thyroid diverticulum | 8.09e-24 | 5 |
pharyngeal pouch 2 | 8.09e-24 | 5 |
thyroid primordium | 8.09e-24 | 5 |
entire pharyngeal arch endoderm | 2.07e-11 | 11 |
early pharyngeal endoderm | 2.07e-11 | 11 |
rectum | 1.96e-08 | 4 |
pharyngeal arch system | 2.44e-07 | 18 |
lower digestive tract | 5.38e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 9.99e-30 | 1 |
epithelioid sarcoma | 3.16e-29 | 1 |
signet ring cell adenocarcinoma | 2.05e-15 | 2 |
mesenchymal cell neoplasm | 2.37e-15 | 2 |
adenocarcinoma | 6.26e-11 | 25 |
gastrointestinal system cancer | 4.38e-09 | 14 |