FFCP PHASE1:Hg19::chrX:37658283..37658294,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chrX:37658283..37658294,+ | |||
|coexpression_cluster_id=C469 | |||
|description=CAGE_peak_at_chrX:37658283..37658294,+ | |||
|id=chrX:37658283..37658294,+ | |||
|ontology_enrichment_celltype=CL:0002194!8.00e-70!63;CL:0000576!8.00e-70!63;CL:0000040!8.00e-70!63;CL:0000559!8.00e-70!63;CL:0002009!2.19e-67!65;CL:0000839!2.83e-65!70;CL:0002057!1.90e-64!42;CL:0000860!1.72e-63!45;CL:0000557!6.93e-61!71;CL:0000766!1.23e-59!76;CL:0002087!1.14e-49!119;CL:0002031!7.01e-45!124;CL:0000738!1.08e-42!140;CL:0000763!1.92e-41!112;CL:0000049!1.92e-41!112;CL:0000037!7.09e-36!172;CL:0000566!7.09e-36!172;CL:0002032!2.51e-34!165;CL:0000837!2.51e-34!165;CL:0000988!3.06e-33!182;CL:0002393!7.10e-17!9;CL:0002397!7.10e-17!9;CL:0000235!3.31e-15!10;CL:0000134!1.46e-12!358;CL:0002320!4.36e-12!365;CL:0000219!2.07e-10!390;CL:0000048!2.03e-08!430;CL:0000723!3.87e-08!436;CL:0000034!8.92e-08!444 | |||
|ontology_enrichment_celltype_v019=CL:0000235;3.17e-41;6!CL:0000473;2.78e-19;39!CL:0000234;2.78e-19;39!CL:0000766;2.28e-10;69!CL:0000763;1.02e-08;100!CL:0000576;3.78e-08;48!CL:0000860;2.01e-07;33!CL:0002057;2.01e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,2.45e-41,6;CL:0000473,6.56e-31,48;CL:0000234,6.56e-31,48;CL:0002194,1.42e-24,59;CL:0000576,1.42e-24,59;CL:0000040,1.42e-24,59;CL:0000559,1.42e-24,59;CL:0000766,2.16e-24,72;CL:0002009,9.33e-24,61;CL:0000839,6.35e-22,66;CL:0000557,1.37e-21,67;CL:0000763,5.03e-16,108;CL:0000049,5.03e-16,108;CL:0000738,5.07e-15,136;CL:0002087,6.30e-15,115;CL:0000860,7.62e-13,42;CL:0002057,7.62e-13,42;CL:0000037,5.74e-12,168;CL:0002031,9.69e-12,120;CL:0000988,2.64e-11,177;CL:0002032,1.94e-10,161;CL:0000837,1.94e-10,161;CL:0002393,1.05e-07,9;CL:0002397,1.05e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.44e-09;42!CL:0000049;9.36e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.07e-53!80;UBERON:0002390!4.79e-49!102;UBERON:0003061!4.79e-49!102;UBERON:0001474!1.46e-48!86;UBERON:0002193!4.32e-46!112;UBERON:0004765!7.16e-40!101;UBERON:0001434!7.16e-40!101;UBERON:0002405!4.63e-38!115;UBERON:0003081!9.62e-21!216;UBERON:0002204!3.86e-20!167;UBERON:0002384!1.95e-11!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.73e-19,76;UBERON:0002390,1.17e-17,98;UBERON:0003061,1.17e-17,98;UBERON:0001474,1.55e-17,82;UBERON:0002193,5.97e-16,108;UBERON:0004765,6.46e-16,90;UBERON:0002405,2.22e-15,93;UBERON:0001434,2.99e-14,100;UBERON:0002204,3.57e-08,167;UBERON:0003081,5.15e-08,203 | |||
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| ||
|short_description=p@chrX:37658283..37658294,+ | |||
}} | }} |
Latest revision as of 07:55, 1 August 2015
Short description: | p@chrX:37658283..37658294, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:37658283..37658294, + |
Coexpression cluster: | C469_Neutrophils_Monocytederived_CD14_CD19_Eosinophils_blood_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 2.45e-41 | 6 |
defensive cell | 6.56e-31 | 48 |
phagocyte | 6.56e-31 | 48 |
monopoietic cell | 1.42e-24 | 59 |
monocyte | 1.42e-24 | 59 |
monoblast | 1.42e-24 | 59 |
promonocyte | 1.42e-24 | 59 |
myeloid leukocyte | 2.16e-24 | 72 |
macrophage dendritic cell progenitor | 9.33e-24 | 61 |
myeloid lineage restricted progenitor cell | 6.35e-22 | 66 |
granulocyte monocyte progenitor cell | 1.37e-21 | 67 |
myeloid cell | 5.03e-16 | 108 |
common myeloid progenitor | 5.03e-16 | 108 |
leukocyte | 5.07e-15 | 136 |
nongranular leukocyte | 6.30e-15 | 115 |
classical monocyte | 7.62e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.62e-13 | 42 |
hematopoietic stem cell | 5.74e-12 | 168 |
hematopoietic lineage restricted progenitor cell | 9.69e-12 | 120 |
hematopoietic cell | 2.64e-11 | 177 |
hematopoietic oligopotent progenitor cell | 1.94e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.94e-10 | 161 |
intermediate monocyte | 1.05e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.05e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.73e-19 | 76 |
hematopoietic system | 1.17e-17 | 98 |
blood island | 1.17e-17 | 98 |
bone element | 1.55e-17 | 82 |
hemolymphoid system | 5.97e-16 | 108 |
skeletal element | 6.46e-16 | 90 |
immune system | 2.22e-15 | 93 |
skeletal system | 2.99e-14 | 100 |
musculoskeletal system | 3.57e-08 | 167 |
lateral plate mesoderm | 5.15e-08 | 203 |