FFCP PHASE1:Hg19::chrX:153752236..153752239,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:153752236..153752239,- | |||
|description=CAGE_peak_at_chrX:153752236..153752239,- | |description=CAGE_peak_at_chrX:153752236..153752239,- | ||
|id=chrX:153752236..153752239,- | |id=chrX:153752236..153752239,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000322;3.27e-23;3!CL:0002202;1.12e-08;9!CL:0002632;1.12e-08;9!CL:0000625;2.47e-07;11!CL:0000182;7.92e-07;12 | |ontology_enrichment_celltype_v019=CL:0000322;3.27e-23;3!CL:0002202;1.12e-08;9!CL:0002632;1.12e-08;9!CL:0000625;2.47e-07;11!CL:0000182;7.92e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000322,4.09e-23,3;CL:0002202,1.21e-08,9;CL:0002632,1.21e-08,9;CL:0000625,2.47e-07,11;CL:0000182,7.48e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0001041;6.23e-10;30!UBERON:0004161;2.47e-07;11 | |ontology_enrichment_development_v019=UBERON:0001041;6.23e-10;30!UBERON:0004161;2.47e-07;11 | ||
|ontology_enrichment_disease=DOID:0050687!2.28e-14!143;DOID:14566!1.64e-13!239;DOID:162!4.11e-13!235;DOID:305!2.19e-12!106 | |ontology_enrichment_disease=DOID:0050687!2.28e-14!143;DOID:14566!1.64e-13!239;DOID:162!4.11e-13!235;DOID:305!2.19e-12!106 | ||
|ontology_enrichment_disease_v019=DOID:3910;5.04e-34;2!DOID:3908;1.60e-14;5!DOID:1325;8.99e-11;7!DOID:3904;8.99e-11;7!DOID:3905;1.12e-08;9 | |ontology_enrichment_disease_v019=DOID:3910;5.04e-34;2!DOID:3908;1.60e-14;5!DOID:1325;8.99e-11;7!DOID:3904;8.99e-11;7!DOID:3905;1.12e-08;9 | ||
|ontology_enrichment_disease_v019_2=DOID:3910,7.05e-34,2;DOID:3908,1.83e-14,5;DOID:1325,9.89e-11,7;DOID:3904,9.89e-11,7;DOID:3905,1.21e-08,9 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;5.04e-34;2!UBERON:0002173;5.04e-34;2!UBERON:0002186;5.04e-34;2!UBERON:0004821;3.27e-23;3!UBERON:0007499;3.27e-23;3!UBERON:0003215;3.27e-23;3!UBERON:0010368;3.27e-23;3!UBERON:0009911;3.27e-23;3!UBERON:0002299;3.27e-23;3!UBERON:0006524;3.27e-23;3!UBERON:0008874;3.27e-23;3!UBERON:0002169;3.27e-23;3!UBERON:0004894;3.27e-23;3!UBERON:0009856;8.69e-18;4!UBERON:0000058;6.13e-08;10 | |ontology_enrichment_uberon_v019=UBERON:0004903;5.04e-34;2!UBERON:0002173;5.04e-34;2!UBERON:0002186;5.04e-34;2!UBERON:0004821;3.27e-23;3!UBERON:0007499;3.27e-23;3!UBERON:0003215;3.27e-23;3!UBERON:0010368;3.27e-23;3!UBERON:0009911;3.27e-23;3!UBERON:0002299;3.27e-23;3!UBERON:0006524;3.27e-23;3!UBERON:0008874;3.27e-23;3!UBERON:0002169;3.27e-23;3!UBERON:0004894;3.27e-23;3!UBERON:0009856;8.69e-18;4!UBERON:0000058;6.13e-08;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,7.05e-34,2;UBERON:0002173,7.05e-34,2;UBERON:0002186,7.05e-34,2;UBERON:0004821,4.09e-23,3;UBERON:0003215,4.09e-23,3;UBERON:0010368,4.09e-23,3;UBERON:0009911,4.09e-23,3;UBERON:0002299,4.09e-23,3;UBERON:0006524,4.09e-23,3;UBERON:0008874,4.09e-23,3;UBERON:0002169,4.09e-23,3;UBERON:0004894,4.09e-23,3;UBERON:0007499,1.09e-11,25;UBERON:0009856,2.77e-11,26 | |||
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| ||
|short_description=p@chrX:153752236..153752239,- | |short_description=p@chrX:153752236..153752239,- | ||
}} | }} |
Latest revision as of 07:06, 1 August 2015
Short description: | p@chrX:153752236..153752239, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:153752236..153752239, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 4.09e-23 | 3 |
epithelial cell of tracheobronchial tree | 1.21e-08 | 9 |
epithelial cell of lower respiratory tract | 1.21e-08 | 9 |
CD8-positive, alpha-beta T cell | 2.47e-07 | 11 |
hepatocyte | 7.48e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 7.05e-34 | 2 |
alveolar duct | 7.05e-34 | 2 |
bronchiole | 7.05e-34 | 2 |
pulmonary alveolus epithelium | 4.09e-23 | 3 |
alveolus | 4.09e-23 | 3 |
pulmonary lobule | 4.09e-23 | 3 |
lobule | 4.09e-23 | 3 |
alveolus of lung | 4.09e-23 | 3 |
alveolar system | 4.09e-23 | 3 |
pulmonary acinus | 4.09e-23 | 3 |
alveolar sac | 4.09e-23 | 3 |
alveolar wall | 4.09e-23 | 3 |
epithelial sac | 1.09e-11 | 25 |
sac | 2.77e-11 | 26 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 7.05e-34 | 2 |
non-small cell lung carcinoma | 1.83e-14 | 5 |
bronchus cancer | 9.89e-11 | 7 |
bronchogenic carcinoma | 9.89e-11 | 7 |
lung carcinoma | 1.21e-08 | 9 |