FFCP PHASE1:Hg19::chrX:1393727..1393755,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chrX:1393727..1393755,- | |||
|coexpression_cluster_id=C865 | |||
|description=CAGE_peak_at_chrX:1393727..1393755,- | |||
|id=chrX:1393727..1393755,- | |||
|ontology_enrichment_celltype=CL:0002057!3.23e-66!42;CL:0000860!1.35e-61!45;CL:0002194!4.92e-52!63;CL:0000576!4.92e-52!63;CL:0000040!4.92e-52!63;CL:0000559!4.92e-52!63;CL:0002009!2.35e-50!65;CL:0000766!5.40e-47!76;CL:0000839!1.43e-46!70;CL:0000557!7.04e-46!71;CL:0000763!6.57e-31!112;CL:0000049!6.57e-31!112;CL:0002087!3.79e-26!119;CL:0002031!5.82e-25!124;CL:0000738!4.63e-24!140;CL:0002032!6.85e-20!165;CL:0000837!6.85e-20!165;CL:0000037!6.15e-19!172;CL:0000566!6.15e-19!172;CL:0000988!1.06e-17!182;CL:0000134!3.73e-07!358;CL:0002320!6.08e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.43e-90;33!CL:0002057;4.43e-90;33!CL:0000473;1.30e-66;39!CL:0000234;1.30e-66;39!CL:0000576;3.78e-45;48!CL:0000766;8.47e-22;69!CL:0000763;2.81e-14;100!CL:0002087;9.05e-14;104!CL:0000738;4.20e-09;136!CL:0000840;5.02e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.97e-79,42;CL:0002057,5.97e-79,42;CL:0000473,8.97e-69,48;CL:0000234,8.97e-69,48;CL:0002194,8.43e-67,59;CL:0000576,8.43e-67,59;CL:0000040,8.43e-67,59;CL:0000559,8.43e-67,59;CL:0002009,1.45e-64,61;CL:0000839,1.48e-59,66;CL:0000557,1.22e-58,67;CL:0000766,1.89e-54,72;CL:0000763,1.35e-35,108;CL:0000049,1.35e-35,108;CL:0002087,2.77e-33,115;CL:0002031,8.50e-32,120;CL:0000738,9.17e-28,136;CL:0002032,4.74e-23,161;CL:0000837,4.74e-23,161;CL:0000037,5.58e-22,168;CL:0000988,1.00e-20,177;CL:0000134,6.59e-09,354;CL:0002320,1.13e-08,361;CL:0000219,7.44e-08,386;CL:0000840,5.02e-07,5;CL:0001029,5.02e-07,5;CL:0000048,7.57e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;1.02e-54;42!CL:0000049;9.72e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.10e-40!80;UBERON:0001474!2.21e-37!86;UBERON:0004765!2.23e-31!101;UBERON:0001434!2.23e-31!101;UBERON:0002390!4.86e-31!102;UBERON:0003061!4.86e-31!102;UBERON:0002193!5.52e-28!112;UBERON:0002405!3.60e-27!115;UBERON:0002204!1.16e-17!167;UBERON:0003081!2.45e-14!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.74e-51,76;UBERON:0001474,1.41e-47,82;UBERON:0004765,3.66e-43,90;UBERON:0002405,1.06e-41,93;UBERON:0002390,1.84e-39,98;UBERON:0003061,1.84e-39,98;UBERON:0001434,1.26e-38,100;UBERON:0002193,1.35e-35,108;UBERON:0002204,3.97e-22,167;UBERON:0003081,1.01e-17,203;UBERON:0000926,2.18e-10,315;UBERON:0004120,2.18e-10,315;UBERON:0006603,2.18e-10,315;UBERON:0002384,2.34e-08,371 | |||
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|short_description=p@chrX:1393727..1393755,- | |||
}} | }} |
Latest revision as of 06:12, 1 August 2015
Short description: | p@chrX:1393727..1393755, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:1393727..1393755, - |
Coexpression cluster: | C865_CD14_Neutrophils_Dendritic_placenta_cervical_epitheloid_spinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.97e-79 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.97e-79 | 42 |
defensive cell | 8.97e-69 | 48 |
phagocyte | 8.97e-69 | 48 |
monopoietic cell | 8.43e-67 | 59 |
monocyte | 8.43e-67 | 59 |
monoblast | 8.43e-67 | 59 |
promonocyte | 8.43e-67 | 59 |
macrophage dendritic cell progenitor | 1.45e-64 | 61 |
myeloid lineage restricted progenitor cell | 1.48e-59 | 66 |
granulocyte monocyte progenitor cell | 1.22e-58 | 67 |
myeloid leukocyte | 1.89e-54 | 72 |
myeloid cell | 1.35e-35 | 108 |
common myeloid progenitor | 1.35e-35 | 108 |
nongranular leukocyte | 2.77e-33 | 115 |
hematopoietic lineage restricted progenitor cell | 8.50e-32 | 120 |
leukocyte | 9.17e-28 | 136 |
hematopoietic oligopotent progenitor cell | 4.74e-23 | 161 |
hematopoietic multipotent progenitor cell | 4.74e-23 | 161 |
hematopoietic stem cell | 5.58e-22 | 168 |
hematopoietic cell | 1.00e-20 | 177 |
mesenchymal cell | 6.59e-09 | 354 |
connective tissue cell | 1.13e-08 | 361 |
motile cell | 7.44e-08 | 386 |
immature conventional dendritic cell | 5.02e-07 | 5 |
common dendritic progenitor | 5.02e-07 | 5 |
multi fate stem cell | 7.57e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.74e-51 | 76 |
bone element | 1.41e-47 | 82 |
skeletal element | 3.66e-43 | 90 |
immune system | 1.06e-41 | 93 |
hematopoietic system | 1.84e-39 | 98 |
blood island | 1.84e-39 | 98 |
skeletal system | 1.26e-38 | 100 |
hemolymphoid system | 1.35e-35 | 108 |
musculoskeletal system | 3.97e-22 | 167 |
lateral plate mesoderm | 1.01e-17 | 203 |
mesoderm | 2.18e-10 | 315 |
mesoderm-derived structure | 2.18e-10 | 315 |
presumptive mesoderm | 2.18e-10 | 315 |
connective tissue | 2.34e-08 | 371 |