FFCP PHASE1:Hg19::chrX:133609285..133609303,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chrX:133609285..133609303,+ | |||
|description=CAGE_peak_at_chrX:133609285..133609303,+ | |||
|id=chrX:133609285..133609303,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002379;3.87e-09;1!CL:0000785;5.07e-09;1!CL:0000819;5.07e-09;1!CL:0002591;1.17e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,4.19e-09,1;CL:0000819,5.28e-09,1;CL:0002591,1.91e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.57e-08!239;DOID:162!5.27e-08!235 | |||
|ontology_enrichment_disease_v019=DOID:154;1.33e-15;2!DOID:4236;1.33e-15;2!DOID:3620;3.87e-09;1!DOID:3565;3.87e-09;1!DOID:0060073;5.07e-09;1!DOID:8675;5.07e-09;1!DOID:3112;1.17e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:154,1.66e-15,2;DOID:4236,1.66e-15,2;DOID:3620,4.19e-09,1;DOID:3565,4.19e-09,1;DOID:0060073,5.28e-09,1;DOID:8675,5.28e-09,1;DOID:3112,6.65e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;1.17e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,9.02e-09,1 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0.487932798790507,0.123121058076788,0.204000691244253,0.313454721478088,0,0.273748850145768,0.125542639594803,0.458480434487708,0.57470412614962,0.236132343941038,0,0,0,0,0,0.369754010166788,0.232401601740905,0.426507697462265,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376484679085209,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0.502497330513487,0,0,0,0,0,0,0.212604299965044,0.209658645508376,0,0.150176892841506,0,0,0.19891667719909,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,2.64342657158052,0,0.790152254325231,0,0,0.205601498999509,0.167186495390678,0,0,0,0.334231370655521,0.589211814949674,0,0,0.25618263945135,0,0.164437904603676,0.276350017785848,0,0,0,0,0.339928028092699,0,0,0.253019692019503,0,0,0.950452044448374,0,0.255973222308837,0,0,0.821127996921047,0.403213486449465,0.267440195783507,0,0,0,0,0,0,0.289693037921647,0,0.486634870302636,0.378139268656271,0,0.087834785693126,0.392937226493138,0.364295288292542,1.48313777113772,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.976248230192678,0.367663080345869,0,0.357198913136319,0.44905874525234,0.112611480483322,0,0,0.549605231791222,0,0,0,0,0.25326102332916,0,0,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0.269421344139376,0.326923806226917,0.454072282934794,0.576175924479999,0,0.624320153660641,0,0.448346041655403,0.939475989150119,0,0.561803226808994,0,0.859840221182376,0,0,0.494533858557114,0,0,0.168336113954066,0.625592599359821,0,0,0,0.150238058906597,0.567160915800105,0,0,0,0,0.309157587715317,0,0,0,0,0.252433774244115,0.276149695926898,0,0,0.10075209822764,0,0,0.272746120590835,0,0.121973706129595,0.132529768321485,0.464775771478074,0.310983165046111,0.252320850875628,0.72995471815166,0,0,0,0,0,0.473227200159376,0.337169380156203,0,0.441175890929576,1.30727666455444,0.474541238222193,0.269662616320329,0.784885860501384,1.15424147083917,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0.201057944823262,0.277765335475589,0.325808305310325,0,0,0.115930404975077,0,0.144366447761074,0,0.190254152234598,0,1.71697232418975,0,0.234004265139238,0.445893486866185,0,0.16798212819886,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0.088048434013226,0,0,0,0,0.381988425558278,0,0,0.411309970813294,0.600686115687835,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0.266422179016099,0.428933980974443,0,0,0.325736184293735,0,2.37585561880029,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0.358121926479791,0.112085143993527,0,0.215627574859517,0,0,0,0,0,0.637938751653163,0.749007023947182,0,0,0.12269149171914,0.500170521059677,0,0.207970861530807,1.24900292158013,0,0.234282829985426,0.300946099727719,0,0,0,0.368738337083406,0.347534457872331,0,0,0,0.215714200818617,0,0,0,0.30239029332968,0.248107807818777,0,0.280660094433074,0,0,0,0,0.462629081407967,0.177561725313127,0.164254312027618,0,0.116210378459959,0,0.40101294060657,0.0920809889358963,0.34444334449382,0.364182336013434,0.131124414959424,0,0.15403067420883,0,0,0.105551628892876,1.13733384070897,0,0.431831832204279,0,0,0,0.254876273045038,0,0.447749509444357,0.219259876645935,0.784306353074702,0,0.656029291399411,0.325378394664303,0,0.27470839445503,0,0,0.650060246036521,0,0.096670718292122,0.154048617114644,0.15350367472613,0.275673144969061,0.107420244868274,0.145016693914229,0.426133137080504,0,0.330569830721956,0.192190067365106,0,0.30347334256665,0.464845549297286,0,0,0,0.532306030317022,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0.235624804691373,0,0,0.421258456238981,0,0,2.11300293513511,0,0.565621727814851,1.13008116620243,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0.143411352204052,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0.670302275535787,0,0.0941438007767792,0.86101074534246,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0.213648142254946,0,0.245040215981032,0.185803175125719,0,0.0711418433484141,0.159426272728822,1.39705560002972,0.191505370132367,0,0,0,0.228234679033192,0.313359791546046,0,0.338583555603207,0.321176150207399,0.605399121573143,0.425846237690326,0.343505344755765,0,0,0.166849141711909,0,0,0,0,0.33307196799782,0,0,0,0.121360521749513,0.111443384277478,0,0,0.296964680832639,0,0.994147647766298,0.281338832821026,0.111308705022906,0,0.211125408127993,0.597743964753209,0,0.251932747854276,0.20453736500431,0.123084805461069,0.622079175323615,0,0,0.511572370226872,0,0,0,0.969332746095218,0.371072392647405,0,0.520855522170466,0.0874599999961957,0,0.341380344856499,0,0.236387681767936,0.344743373241465,0.291604613383254,1.21537496453305,0,0.241192877250816,0,0.221158519862449,0.886642856860642,0.438770794307945,0,0,0,0,0.23056390438806,0.179515288819544,0.217294743844016,0,0.0915975934018623,0,6.13159789174419,0,0,0.451191321234361,0.588187602953219,0.167821586975843,0,0,1.68798451622422,0,0,0.216388639742091,0,0,0,0,0.370691816839509,0.104421949505455,0.067401132980677,0,0.234264445725339,2.18945747058799,0,0.242780379534093,0.394584402849391,0,0,0,0.300646838828985,0.414752765588989,0,0.330991955875499,0,0,0,0.277349346026277,0.347119476670262,0,0,0,0.51595809741485,1.06431964417994,0.584714536689484,0.656923656425674,0.0969890164884194,0.0882561266915003,0.225980740780532,0.274083849293502,0.19871461170299,0.189932387867636,0.391102765469606,0,0,0.799238438328521,0,0.229073192331831,0.686379991447858,0.432164393964449,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0.262887354279314,0,0.458320848023367,0,0.199679000498991,0,0,0.0671834724867263,0.360299883542404,0,0.236349546921671,0.164831716762333,0.202210631562555,0.196854963029498,0.0846733320657845,0,0.272406812223151,0.160753148465019,0.275078873194468,3.32352270423348,0.449947783103001,0,0.303747783290123,0.670869375198532,0.236417121897595,0,0.211200673038813,0,0.191915197319445,0,0,0.25426853765475,0.542999601753713,0,0.653174720218818,0,0.082092520749339,0.170388021785422,0.339936274560377,0,0,0.258565912723101,0.39669780522807,0,0,0,0.157204305099666,0,1.48849806543585,0.197611631897944,0.852548188666271,0,0,0,0,0,0.314108192500469,0,4.51497180137264,0.250381861413,0,0.221858103073705,0.0620964029413835,0,0,0,0,3.05845565607623,0.468334905806882,0.144921028610825,0.298509605773748,0,0.554805861502613,0,0.50313580350515,0,0,0,0.466311601748341,0.147855149989634,0.159296767163702,0,0,0.414706207840855,0.265841714557995,0.521745061811734,0,0,0.406870733204662,0.545545977607678,0,0,0.398095888698616,1.60011105865261,0,0,0,0,0,0,0.453411851024545,0.231522474323834,0.244736704506468,0.537266523244462,0,0,0.706756583783524,0.578742114812744,0.506827321959218,0.512483037175893,0,0.303859956177382,0.414775308455192,0.389720617678777,0.132864840313363,0.163565394255844,1.31043939538565,0.737318726261158,0,0.19998739585493,0,0.172214979660816,0,0,0,0,0,0.107824811396682,0,0.218419276384028,0,0.637724760305049,0.495743057036009,0,0,0.157723490002507,0.80057074828547,0,0.3062454773532,0.0642292250964595,0,0.319267718114302,0.615349092722265,0.252071696221718,0.0691572524642179,0.484426936895553,0,0,0.353909170043221,1.28400018965175,0.231051332300676,0,0,0,0,0,0,0,1.80149109261106,0,0.405225507710368,0.781078098613847,0.413373593002368,0.126831620387814,0,0,0,0,0.127762427639595,0,0,0.606965604236632,0,0.0887023701626388,0.345701962667338,0.171488009437418,0.203909198930495,0.197318320688547,0.118193840883968,0.111231401892069,0,0.471346769748006,0,0,0.647782773655864,0,0,0,0.23248285073625,0,0,0,0,0,0,0.236664001461131,0,0,0.4582137370881,0.31020638566432,0.955538938977433,0,0,0.243835849964539,0,0,0,0,0.233939463462106,0.596852325484105,0.237840181555137,0.11294608203896,0.219881033490858,0,0.0771741581079447,0,1.88126918544609,0.245148321753905,0,0,0,0,0.169927114687817,0.187967835959707,0,0.0999411559249289,0,0,0.240724100067505,0,0,0.286679166302903,0.473314686579554,0.339957450954573,0,0,1.11598505450025,0,0.432626562123789,0.126166424835079,0.437062287854782,0.253397002022874,0,0.534434810531121,0,3.25919801080088,0.151557396436479,0.803892390468535,0,0,0,0.23806443146374,0.0645889098360061,0.0620747142958579,0,0,0,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0.0814032686109745,0.106727345877715,0,0,0,0,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p@chrX:133609285..133609303,+ | |||
}} |
Latest revision as of 05:51, 1 August 2015
Short description: | p@chrX:133609285..133609303, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:133609285..133609303, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 4.19e-09 | 1 |
B-1 B cell | 5.28e-09 | 1 |
smooth muscle cell of the pulmonary artery | 1.91e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
lymph node | 9.02e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 1.66e-15 | 2 |
carcinosarcoma | 1.66e-15 | 2 |
central nervous system cancer | 4.19e-09 | 1 |
meningioma | 4.19e-09 | 1 |
lymphatic system cancer | 5.28e-09 | 1 |
lymphosarcoma | 5.28e-09 | 1 |
papillary adenocarcinoma | 6.65e-09 | 1 |