FFCP PHASE1:Hg19::chrX:110489405..110489430,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chrX:110489405..110489430,- | |||
|coexpression_cluster_id=C2025 | |||
|description=CAGE_peak_at_chrX:110489405..110489430,- | |||
|id=chrX:110489405..110489430,- | |||
|ontology_enrichment_celltype=CL:0002541!5.00e-10!3;CL:0002322!5.63e-09!5 | |||
|ontology_enrichment_celltype_v019=CL:0002541;9.38e-15;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,9.39e-15,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;4.25e-21;2!UBERON:0003124;1.01e-11;1!UBERON:0005754;2.96e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;5.16e-11;1!DOID:10165;5.16e-11;1!DOID:1798;5.16e-11;1!DOID:170;2.26e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,4.91e-11,1;DOID:10165,4.91e-11,1;DOID:1798,4.91e-11,1;DOID:170,2.11e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000476!5.00e-10!3;UBERON:0000920!5.00e-10!3;UBERON:0006947!5.15e-10!3;UBERON:0004054!5.15e-10!3;UBERON:0005631!1.63e-09!14;UBERON:0000158!1.63e-09!14;UBERON:0005904!1.39e-07!4;UBERON:0003124!2.56e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.50e-30;3!UBERON:0004054;1.50e-30;3!UBERON:0005904;4.29e-23;4!UBERON:0003124;9.38e-15;3!UBERON:0000920;9.38e-15;3!UBERON:0001301;1.31e-11;1!UBERON:0002426;1.31e-11;1!UBERON:0003831;1.31e-11;1!UBERON:0003898;1.31e-11;1!UBERON:0004830;1.31e-11;1!UBERON:0003830;1.31e-11;1!UBERON:0005175;1.31e-11;1!UBERON:0001774;1.31e-11;1!UBERON:0001103;1.31e-11;1!UBERON:0001000;2.96e-11;1!UBERON:0000998;2.96e-11;1!UBERON:0006868;2.96e-11;1!UBERON:0005352;2.96e-11;1!UBERON:0000058;1.36e-09;10!UBERON:0003135;9.13e-09;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.11e-30,3;UBERON:0004054,1.11e-30,3;UBERON:0005904,3.42e-23,4;UBERON:0000920,9.39e-15,3;UBERON:0003124,6.75e-14,7;UBERON:0001301,1.18e-11,1;UBERON:0002426,1.45e-11,1;UBERON:0003831,1.45e-11,1;UBERON:0003898,1.45e-11,1;UBERON:0004830,1.45e-11,1;UBERON:0003830,1.45e-11,1;UBERON:0005175,1.45e-11,1;UBERON:0001774,1.45e-11,1;UBERON:0001103,1.45e-11,1;UBERON:0010084,1.45e-11,1;UBERON:0001000,2.42e-11,1;UBERON:0005352,2.42e-11,1;UBERON:0000998,2.96e-11,1;UBERON:0006868,2.96e-11,1;UBERON:0003135,8.43e-09,11;UBERON:0005631,3.38e-07,14;UBERON:0000158,3.38e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0,0.232387885739037,0.414644220061482,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,2.60279707715243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06082023295445,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0.890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01260162485693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0.921482106297696,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18193840883968,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0.922255617552241,0,0.108647371922008,0.957003479195758,4.1218917030838,10.1276607443541,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,1.22206028986725,0,0,0,0,4.01288823649394,0,0,0,0,2.76209081994573,0,0,0.063186579628488,0,0,0,0,0,0,0,0.277349346026277,0,0,0,4.89234671077684,0,0,0,0,0,0,2.48578814858586,0,0,0,0.391102765469606,0,0.213452994739353,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50109113962448,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344429959321631,0,0,0,0.622077260032973,0,0,0,0,0,0,0.495743057036009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0.150420656698515,0,0,1.30953347240711,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,6.91878487268583,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0.869291361512897,0,0,0,0,0.430227358820278,0,0,2.54032230114557,0,0,0,0,0,0,0,0.102662806856247,3.4794432940146,0.485710993059139,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0.8453114551668,0,0.0939839179798536,0,0,0,0,0,0,0.458729283404541,0,0,0,0,2.1161073620616,0,0,0,0,0.109265571963696,0,0,0,0,0,0.151557396436479,0,0,0,0.213233981900981,3.80903090341985,0,0,0,0,0.606351566874658,0.435433495793923,6.16019941953506,0.134704106029175,0,2.99394320891412,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p@chrX:110489405..110489430,- | |||
}} |
Latest revision as of 05:03, 1 August 2015
Short description: | p@chrX:110489405..110489430, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:110489405..110489430, - |
Coexpression cluster: | C2025_placenta_skeletal_tongue_trachea_chorionic_epididymis_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 9.39e-15 | 3 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.11e-30 | 3 |
internal male genitalia | 1.11e-30 | 3 |
duct of male reproductive system | 3.42e-23 | 4 |
egg chorion | 9.39e-15 | 3 |
chorion | 6.75e-14 | 7 |
epididymis | 1.18e-11 | 1 |
chest muscle | 1.45e-11 | 1 |
respiratory system muscle | 1.45e-11 | 1 |
skeletal muscle of trunk | 1.45e-11 | 1 |
respiratory system skeletal muscle | 1.45e-11 | 1 |
thoracic segment muscle | 1.45e-11 | 1 |
chest organ | 1.45e-11 | 1 |
muscle of trunk | 1.45e-11 | 1 |
diaphragm | 1.45e-11 | 1 |
future diaphragm | 1.45e-11 | 1 |
vas deferens | 2.42e-11 | 1 |
spermatic cord | 2.42e-11 | 1 |
seminal vesicle | 2.96e-11 | 1 |
seminal fluid secreting gland | 2.96e-11 | 1 |
male reproductive organ | 8.43e-09 | 11 |
extraembryonic membrane | 3.38e-07 | 14 |
membranous layer | 3.38e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 4.91e-11 | 1 |
endocrine pancreas cancer | 4.91e-11 | 1 |
pancreatic endocrine carcinoma | 4.91e-11 | 1 |
endocrine gland cancer | 2.11e-07 | 6 |