FFCP PHASE1:Hg19::chrX:110489316..110489332,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chrX:110489316..110489332,- | |||
|coexpression_cluster_id=C2025 | |||
|description=CAGE_peak_at_chrX:110489316..110489332,- | |||
|id=chrX:110489316..110489332,- | |||
|ontology_enrichment_celltype=CL:0002541!7.40e-09!3;CL:0002322!2.08e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002541;2.15e-19;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.43e-19,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.56e-13;2!UBERON:0003124;8.00e-08;1!UBERON:0005754;3.20e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;1.38e-07;1!DOID:10165;1.38e-07;1!DOID:1798;1.38e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.25e-07,1;DOID:10165,1.25e-07,1;DOID:1798,1.25e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.33e-10!14;UBERON:0000158!1.33e-10!14;UBERON:0003124!1.94e-09!7;UBERON:0000476!7.40e-09!3;UBERON:0000920!7.40e-09!3;UBERON:0006947!1.03e-08!3;UBERON:0004054!1.03e-08!3;UBERON:0003135!1.51e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.15e-19;3!UBERON:0000920;2.15e-19;3!UBERON:0006947;8.07e-19;3!UBERON:0004054;8.07e-19;3!UBERON:0005904;2.94e-14;4!UBERON:0000922;1.45e-11;49!UBERON:0005631;4.67e-10;10!UBERON:0000158;4.67e-10;10!UBERON:0001301;8.81e-08;1!UBERON:0002426;1.10e-07;1!UBERON:0003831;1.10e-07;1!UBERON:0003898;1.10e-07;1!UBERON:0004830;1.10e-07;1!UBERON:0003830;1.10e-07;1!UBERON:0005175;1.10e-07;1!UBERON:0001774;1.10e-07;1!UBERON:0001103;1.10e-07;1!UBERON:0005795;1.77e-07;1!UBERON:0007029;3.20e-07;1!UBERON:0001000;3.20e-07;1!UBERON:0000998;3.20e-07;1!UBERON:0006868;3.20e-07;1!UBERON:0005352;3.20e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.43e-19,3;UBERON:0006947,5.43e-19,3;UBERON:0004054,5.43e-19,3;UBERON:0003124,1.31e-14,7;UBERON:0005904,2.19e-14,4;UBERON:0005631,7.15e-11,14;UBERON:0000158,7.15e-11,14;UBERON:0001301,9.10e-08,1;UBERON:0002426,1.03e-07,1;UBERON:0003831,1.03e-07,1;UBERON:0003898,1.03e-07,1;UBERON:0004830,1.03e-07,1;UBERON:0003830,1.03e-07,1;UBERON:0005175,1.03e-07,1;UBERON:0001774,1.03e-07,1;UBERON:0001103,1.03e-07,1;UBERON:0010084,1.03e-07,1;UBERON:0007029,2.07e-07,1;UBERON:0000998,2.35e-07,1;UBERON:0006868,2.35e-07,1;UBERON:0001000,2.83e-07,1;UBERON:0005352,2.83e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0.348581828608555,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09123034943167,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0.145016693914229,0,1.60257664164127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07116361708914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,1.18785872333055,0.921482106297696,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,2.36387681767936,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,1.84451123510448,0.179515288819544,0.325942115766024,1.27600463892768,6.22863635132664,13.8589041764845,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.0884575645033392,0.611030144933625,0,0,0,0,4.81546588379273,0,0,0,0,1.57833761139756,3.62972148145992,0,0,0,0,0,0,0,0,0,0.416024019039416,0,0,0,7.16379339792324,0,0,0,0,0,0,1.58186518546373,0,0,0,0.391102765469606,0,0,0.19980960958213,0.576361668616424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0.83088067605837,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07220795687463,0.260994291965212,0,0,0,0,1.23520578864389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,1.23935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.66669372273991,0.163771917510097,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,1.21393120847326,0,8.07191568480013,0,0,0,0,0,0,0,0,0,3.65263488203798,0,0,0.0714765441766563,0,0,1.56472445072321,0,0,0,0,0.430227358820278,0,0,1.69354820076372,0,0,0,0,0,0,0,0,18.5570309014112,1.94284397223656,0,0,0,0,0,0,0,1.31135736302374,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0.730336388246517,0.458729283404541,0,0,0,0,4.2322147241232,0,0,0,0,0.874124575709564,0,0,0,0,0,0.303114792872958,0.267964130156178,0,0,0.639701945702943,7.61806180683969,0,0.124149428591716,0,0,2.62752345645685,0.653150243690884,16.4271984520935,0,0,4.65724499164419,0,0,0,0,0,0,2.03448089157869,0,0.201273793591026,0 | |||
|short_description=p@chrX:110489316..110489332,- | |||
}} |
Latest revision as of 05:03, 1 August 2015
Short description: | p@chrX:110489316..110489332, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:110489316..110489332, - |
Coexpression cluster: | C2025_placenta_skeletal_tongue_trachea_chorionic_epididymis_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.43e-19 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.43e-19 | 3 |
male genital duct | 5.43e-19 | 3 |
internal male genitalia | 5.43e-19 | 3 |
chorion | 1.31e-14 | 7 |
duct of male reproductive system | 2.19e-14 | 4 |
extraembryonic membrane | 7.15e-11 | 14 |
membranous layer | 7.15e-11 | 14 |
epididymis | 9.10e-08 | 1 |
chest muscle | 1.03e-07 | 1 |
respiratory system muscle | 1.03e-07 | 1 |
skeletal muscle of trunk | 1.03e-07 | 1 |
respiratory system skeletal muscle | 1.03e-07 | 1 |
thoracic segment muscle | 1.03e-07 | 1 |
chest organ | 1.03e-07 | 1 |
muscle of trunk | 1.03e-07 | 1 |
diaphragm | 1.03e-07 | 1 |
future diaphragm | 1.03e-07 | 1 |
surface | 2.07e-07 | 1 |
seminal vesicle | 2.35e-07 | 1 |
seminal fluid secreting gland | 2.35e-07 | 1 |
vas deferens | 2.83e-07 | 1 |
spermatic cord | 2.83e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.25e-07 | 1 |
endocrine pancreas cancer | 1.25e-07 | 1 |
pancreatic endocrine carcinoma | 1.25e-07 | 1 |