FFCP PHASE1:Hg19::chrM:988..1012,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrM:988..1012,+ | |||
|coexpression_cluster_id=C434 | |coexpression_cluster_id=C434 | ||
|description=CAGE_peak_at_chrM:988..1012,+ | |description=CAGE_peak_at_chrM:988..1012,+ | ||
|id=chrM:988..1012,+ | |id=chrM:988..1012,+ | ||
|ontology_enrichment_celltype=CL:0002057!5.99e-07!42 | |ontology_enrichment_celltype=CL:0002057!5.99e-07!42 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.55e-07,48;CL:0000234,1.55e-07,48;CL:0000860,5.99e-07,42;CL:0002057,5.99e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.75e-29!115;UBERON:0001049!8.16e-17!57;UBERON:0005068!8.16e-17!57;UBERON:0006241!8.16e-17!57;UBERON:0007135!8.16e-17!57;UBERON:0003080!1.34e-15!42;UBERON:0002780!4.31e-15!41;UBERON:0001890!4.31e-15!41;UBERON:0006240!4.31e-15!41;UBERON:0002616!2.92e-14!59;UBERON:0002020!7.66e-14!34;UBERON:0003528!7.66e-14!34;UBERON:0001893!3.82e-13!34;UBERON:0002791!6.81e-13!33;UBERON:0001869!1.42e-12!32;UBERON:0000955!6.57e-12!69;UBERON:0006238!6.57e-12!69;UBERON:0001017!5.61e-11!82;UBERON:0002619!9.19e-11!22;UBERON:0002346!1.04e-10!90;UBERON:0003075!5.86e-10!86;UBERON:0007284!5.86e-10!86;UBERON:0005743!9.45e-10!86;UBERON:0001950!1.35e-09!20;UBERON:0000956!2.01e-09!25;UBERON:0000203!2.01e-09!25;UBERON:0000073!7.01e-08!94;UBERON:0001016!7.01e-08!94;UBERON:0003056!7.47e-08!61 | |ontology_enrichment_uberon=UBERON:0007023!3.75e-29!115;UBERON:0001049!8.16e-17!57;UBERON:0005068!8.16e-17!57;UBERON:0006241!8.16e-17!57;UBERON:0007135!8.16e-17!57;UBERON:0003080!1.34e-15!42;UBERON:0002780!4.31e-15!41;UBERON:0001890!4.31e-15!41;UBERON:0006240!4.31e-15!41;UBERON:0002616!2.92e-14!59;UBERON:0002020!7.66e-14!34;UBERON:0003528!7.66e-14!34;UBERON:0001893!3.82e-13!34;UBERON:0002791!6.81e-13!33;UBERON:0001869!1.42e-12!32;UBERON:0000955!6.57e-12!69;UBERON:0006238!6.57e-12!69;UBERON:0001017!5.61e-11!82;UBERON:0002619!9.19e-11!22;UBERON:0002346!1.04e-10!90;UBERON:0003075!5.86e-10!86;UBERON:0007284!5.86e-10!86;UBERON:0005743!9.45e-10!86;UBERON:0001950!1.35e-09!20;UBERON:0000956!2.01e-09!25;UBERON:0000203!2.01e-09!25;UBERON:0000073!7.01e-08!94;UBERON:0001016!7.01e-08!94;UBERON:0003056!7.47e-08!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;8.41e-12;34!UBERON:0002020;8.41e-12;34!UBERON:0002791;1.57e-11;32!UBERON:0001869;1.93e-11;32!UBERON:0001893;3.57e-11;34!UBERON:0002780;5.08e-11;41!UBERON:0001890;5.08e-11;41!UBERON:0002619;9.26e-11;22!UBERON:0001950;1.36e-09;20!UBERON:0000956;2.04e-09;25!UBERON:0000203;2.04e-09;25!UBERON:0000073;3.58e-09;53!UBERON:0002616;3.58e-09;53!UBERON:0007023;6.58e-09;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.44e-28,114;UBERON:0001049,2.55e-16,56;UBERON:0005068,2.55e-16,56;UBERON:0006241,2.55e-16,56;UBERON:0007135,2.55e-16,56;UBERON:0000073,2.32e-15,53;UBERON:0002616,2.32e-15,53;UBERON:0002780,4.31e-15,41;UBERON:0001890,4.31e-15,41;UBERON:0003080,4.31e-15,41;UBERON:0006240,4.31e-15,41;UBERON:0003528,7.66e-14,34;UBERON:0002020,7.66e-14,34;UBERON:0001893,3.82e-13,34;UBERON:0002791,9.92e-13,32;UBERON:0001869,1.42e-12,32;UBERON:0002346,4.55e-12,86;UBERON:0000955,1.73e-11,68;UBERON:0006238,1.73e-11,68;UBERON:0003075,2.73e-11,82;UBERON:0007284,2.73e-11,82;UBERON:0010371,7.63e-11,104;UBERON:0002619,9.19e-11,22;UBERON:0001017,1.37e-10,81;UBERON:0001950,1.35e-09,20;UBERON:0000956,2.01e-09,25;UBERON:0000203,2.01e-09,25;UBERON:0001016,1.61e-08,89;UBERON:0003056,7.41e-08,61 | |||
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1806,454.677499722128,411.289375625048 | ||
|short_description=p@chrM:988..1012,+ | |short_description=p@chrM:988..1012,+ | ||
}} | }} |
Latest revision as of 04:22, 1 August 2015
Short description: | p@chrM:988..1012, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrM:988..1012, + |
Coexpression cluster: | C434_heart_left_Monocytederived_acute_skeletal_penis_seminal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.55e-07 | 48 |
phagocyte | 1.55e-07 | 48 |
classical monocyte | 5.99e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.99e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.44e-28 | 114 |
neural tube | 2.55e-16 | 56 |
neural rod | 2.55e-16 | 56 |
future spinal cord | 2.55e-16 | 56 |
neural keel | 2.55e-16 | 56 |
regional part of nervous system | 2.32e-15 | 53 |
regional part of brain | 2.32e-15 | 53 |
regional part of forebrain | 4.31e-15 | 41 |
forebrain | 4.31e-15 | 41 |
anterior neural tube | 4.31e-15 | 41 |
future forebrain | 4.31e-15 | 41 |
brain grey matter | 7.66e-14 | 34 |
gray matter | 7.66e-14 | 34 |
telencephalon | 3.82e-13 | 34 |
regional part of telencephalon | 9.92e-13 | 32 |
cerebral hemisphere | 1.42e-12 | 32 |
neurectoderm | 4.55e-12 | 86 |
brain | 1.73e-11 | 68 |
future brain | 1.73e-11 | 68 |
neural plate | 2.73e-11 | 82 |
presumptive neural plate | 2.73e-11 | 82 |
ecto-epithelium | 7.63e-11 | 104 |
regional part of cerebral cortex | 9.19e-11 | 22 |
central nervous system | 1.37e-10 | 81 |
neocortex | 1.35e-09 | 20 |
cerebral cortex | 2.01e-09 | 25 |
pallium | 2.01e-09 | 25 |
nervous system | 1.61e-08 | 89 |
pre-chordal neural plate | 7.41e-08 | 61 |