FFCP PHASE1:Hg19::chr9:87024410..87024417,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:87024410..87024417,+ | |||
|coexpression_cluster_id=C330 | |coexpression_cluster_id=C330 | ||
|description=CAGE_peak_at_chr9:87024410..87024417,+ | |description=CAGE_peak_at_chr9:87024410..87024417,+ | ||
|id=chr9:87024410..87024417,+ | |id=chr9:87024410..87024417,+ | ||
|ontology_enrichment_celltype=CL:0000222;4.69e-19;1!CL:0000322;1.82e-07;3 | |ontology_enrichment_celltype=CL:0002097!1.53e-10!2;CL:0000174!2.66e-07!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0000222;4.69e-19;1!CL:0000322;1.82e-07;3 | ||
|ontology_enrichment_disease=DOID:0050619;1.30e-19;1!DOID:1357;1.30e-19;1!DOID:3347;1.71e-19;1!DOID:6193;2.25e-19;1!DOID:1325;2.30e-11;7!DOID:3904;2.30e-11;7!DOID:0050615;6.86e-11;16!DOID:3910;1.43e-10;2!DOID:3350;2.27e-10;2!DOID:3905;4.80e-09;9 | |ontology_enrichment_celltype_v019_2=CL:0000322,1.82e-07,3 | ||
|ontology_enrichment_uberon=UBERON:0001764;1.30e-19;1!UBERON:0001825;1.30e-19;1!UBERON:0004903;1.43e-10;2!UBERON:0002173;1.43e-10;2!UBERON:0002186;1.43e-10;2!UBERON:0000473;5.93e-10;8!UBERON:0003135;1.75e-07;11!UBERON:0004821;1.82e-07;3!UBERON:0007499;1.82e-07;3!UBERON:0003215;1.82e-07;3!UBERON:0010368;1.82e-07;3!UBERON:0009911;1.82e-07;3!UBERON:0002299;1.82e-07;3!UBERON:0006524;1.82e-07;3!UBERON:0008874;1.82e-07;3!UBERON:0002169;1.82e-07;3!UBERON:0004894;1.82e-07;3 | |ontology_enrichment_development_v019=UBERON:0009117;3.83e-08;10!UBERON:0005564;3.83e-08;10 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.30e-19;1!DOID:1357;1.30e-19;1!DOID:3347;1.71e-19;1!DOID:6193;2.25e-19;1!DOID:1325;2.30e-11;7!DOID:3904;2.30e-11;7!DOID:0050615;6.86e-11;16!DOID:3910;1.43e-10;2!DOID:3350;2.27e-10;2!DOID:3905;4.80e-09;9 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.30e-19,1;DOID:1357,1.30e-19,1;DOID:3347,1.56e-19,1;DOID:6193,2.25e-19,1;DOID:1325,2.30e-11,7;DOID:3904,2.30e-11,7;DOID:0050615,6.86e-11,16;DOID:3910,1.43e-10,2;DOID:3350,2.27e-10,2;DOID:3905,4.80e-09,9 | |||
|ontology_enrichment_uberon=UBERON:0003135!2.35e-07!11;UBERON:0002369!2.66e-07!3;UBERON:0001235!2.66e-07!3;UBERON:0006858!2.66e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;1.30e-19;1!UBERON:0001825;1.30e-19;1!UBERON:0004903;1.43e-10;2!UBERON:0002173;1.43e-10;2!UBERON:0002186;1.43e-10;2!UBERON:0000473;5.93e-10;8!UBERON:0003135;1.75e-07;11!UBERON:0004821;1.82e-07;3!UBERON:0007499;1.82e-07;3!UBERON:0003215;1.82e-07;3!UBERON:0010368;1.82e-07;3!UBERON:0009911;1.82e-07;3!UBERON:0002299;1.82e-07;3!UBERON:0006524;1.82e-07;3!UBERON:0008874;1.82e-07;3!UBERON:0002169;1.82e-07;3!UBERON:0004894;1.82e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,1.30e-19,1;UBERON:0001825,1.30e-19,1;UBERON:0004903,1.43e-10,2;UBERON:0002173,1.43e-10,2;UBERON:0002186,1.43e-10,2;UBERON:0000473,5.80e-10,8;UBERON:0003135,1.73e-07,11;UBERON:0004821,1.82e-07,3;UBERON:0003215,1.82e-07,3;UBERON:0010368,1.82e-07,3;UBERON:0009911,1.82e-07,3;UBERON:0002299,1.82e-07,3;UBERON:0006524,1.82e-07,3;UBERON:0008874,1.82e-07,3;UBERON:0002169,1.82e-07,3;UBERON:0004894,1.82e-07,3 | |||
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|short_description=p@chr9:87024410..87024417,+ | |short_description=p@chr9:87024410..87024417,+ | ||
}} | }} |
Latest revision as of 03:01, 1 August 2015
Short description: | p@chr9:87024410..87024417, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:87024410..87024417, + |
Coexpression cluster: | C330_bronchioalveolar_oral_signet_embryonic_lymphangiectasia_testis_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.82e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 1.30e-19 | 1 |
paranasal sinus | 1.30e-19 | 1 |
bronchoalveolar duct junction | 1.43e-10 | 2 |
alveolar duct | 1.43e-10 | 2 |
bronchiole | 1.43e-10 | 2 |
testis | 5.80e-10 | 8 |
male reproductive organ | 1.73e-07 | 11 |
pulmonary alveolus epithelium | 1.82e-07 | 3 |
alveolus | 1.82e-07 | 3 |
pulmonary lobule | 1.82e-07 | 3 |
lobule | 1.82e-07 | 3 |
alveolus of lung | 1.82e-07 | 3 |
alveolar system | 1.82e-07 | 3 |
pulmonary acinus | 1.82e-07 | 3 |
alveolar sac | 1.82e-07 | 3 |
alveolar wall | 1.82e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.30e-19 | 1 |
maxillary sinus cancer | 1.30e-19 | 1 |
osteosarcoma | 1.56e-19 | 1 |
epithelioid sarcoma | 2.25e-19 | 1 |
bronchus cancer | 2.30e-11 | 7 |
bronchogenic carcinoma | 2.30e-11 | 7 |
respiratory system cancer | 6.86e-11 | 16 |
lung adenocarcinoma | 1.43e-10 | 2 |
mesenchymal cell neoplasm | 2.27e-10 | 2 |
lung carcinoma | 4.80e-09 | 9 |