FFCP PHASE1:Hg19::chr9:75778388..75778419,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:75778388..75778419,+ | |||
|coexpression_cluster_id=C827 | |||
|description=CAGE_peak_at_chr9:75778388..75778419,+ | |description=CAGE_peak_at_chr9:75778388..75778419,+ | ||
|id=chr9:75778388..75778419,+ | |id=chr9:75778388..75778419,+ | ||
|ontology_enrichment_celltype=CL:0000860!1.41e-19!45;CL:0002057!3.92e-19!42;CL:0000557!1.88e-15!71;CL:0002009!1.02e-14!65;CL:0000839!1.46e-14!70;CL:0002194!3.61e-14!63;CL:0000576!3.61e-14!63;CL:0000040!3.61e-14!63;CL:0000559!3.61e-14!63;CL:0000766!2.15e-13!76;CL:0000723!8.33e-13!436;CL:0000048!1.51e-12!430;CL:0000012!3.65e-12!682;CL:0000034!4.46e-12!444;CL:0002371!4.67e-12!591;CL:0000548!5.15e-12!679;CL:0000004!5.15e-12!679;CL:0000255!5.15e-12!679;CL:0000144!6.84e-12!625;CL:0000063!3.26e-10!578;CL:0000134!6.27e-10!358;CL:0000003!1.48e-09!722;CL:0002320!1.74e-09!365;CL:0000219!1.32e-07!390 | |ontology_enrichment_celltype=CL:0000860!1.41e-19!45;CL:0002057!3.92e-19!42;CL:0000557!1.88e-15!71;CL:0002009!1.02e-14!65;CL:0000839!1.46e-14!70;CL:0002194!3.61e-14!63;CL:0000576!3.61e-14!63;CL:0000040!3.61e-14!63;CL:0000559!3.61e-14!63;CL:0000766!2.15e-13!76;CL:0000723!8.33e-13!436;CL:0000048!1.51e-12!430;CL:0000012!3.65e-12!682;CL:0000034!4.46e-12!444;CL:0002371!4.67e-12!591;CL:0000548!5.15e-12!679;CL:0000004!5.15e-12!679;CL:0000255!5.15e-12!679;CL:0000144!6.84e-12!625;CL:0000063!3.26e-10!578;CL:0000134!6.27e-10!358;CL:0000003!1.48e-09!722;CL:0002320!1.74e-09!365;CL:0000219!1.32e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.34e-24;33!CL:0002057;1.34e-24;33!CL:0000473;1.50e-18;39!CL:0000234;1.50e-18;39!CL:0000576;1.43e-12;48!CL:0000766;7.87e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.13e-24,42;CL:0002057,3.13e-24,42;CL:0000473,1.43e-22,48;CL:0000234,1.43e-22,48;CL:0000557,6.65e-18,67;CL:0002009,4.02e-17,61;CL:0000839,1.21e-16,66;CL:0002194,2.13e-16,59;CL:0000576,2.13e-16,59;CL:0000040,2.13e-16,59;CL:0000559,2.13e-16,59;CL:0000723,2.63e-16,433;CL:0000766,6.63e-16,72;CL:0000034,1.12e-15,441;CL:0000048,1.18e-15,427;CL:0000134,8.19e-15,354;CL:0002320,4.70e-14,361;CL:0000219,2.56e-11,386;CL:0000763,6.73e-07,108;CL:0000049,6.73e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;5.09e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.91e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002204!8.34e-16!167;UBERON:0002371!5.70e-15!80;UBERON:0001474!7.43e-14!86;UBERON:0004765!2.81e-13!101;UBERON:0001434!2.81e-13!101;UBERON:0000926!1.64e-10!448;UBERON:0004120!1.64e-10!448;UBERON:0006603!1.64e-10!448;UBERON:0002390!3.07e-10!102;UBERON:0003061!3.07e-10!102;UBERON:0002384!1.75e-09!375;UBERON:0003081!1.84e-09!216;UBERON:0002193!5.07e-09!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.37e-17,76;UBERON:0001474,3.06e-16,82;UBERON:0004765,1.23e-15,90;UBERON:0001434,5.71e-15,100;UBERON:0002204,2.53e-14,167;UBERON:0002384,8.53e-14,371;UBERON:0000926,5.38e-13,315;UBERON:0004120,5.38e-13,315;UBERON:0006603,5.38e-13,315;UBERON:0002390,3.72e-12,98;UBERON:0003061,3.72e-12,98;UBERON:0002405,1.96e-11,93;UBERON:0003081,6.85e-10,203;UBERON:0002193,9.14e-10,108 | |||
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|phase1_expression=1.45342703416445,6.42301571672949,0.986680828671798,3.00219895059391,4.02264984984559,0.872338524100369,0,0,0.783556884599516,0,0,0,0.263766978228454,0.495065411840187,0,6.05092631806598,6.02694528023977,3.65155045193687,5.85519358548608,0.123121058076788,0,0.313454721478088,0.85870796139317,3.96935832711364,1.00434111675842,0.0764134057479513,0,0,0.393364276848904,1.15148819429164,1.39334510984468,3.67768489791571,0.30120591877825,0,0,0,0,1.10799081706375,1.60435557976113,1.51907609501096,0,0,0,12.7950450126017,7.17964293008738,6.54976965207104,11.6214518452842,6.16751832032739,7.43295290148249,13.2338500468189,10.5025889676931,10.4052181150977,20.6847408441971,5.16387746867061,13.5426486594342,19.2007186333457,6.5497476013883,10.7867272533641,29.0779697752357,2.56743221660875,13.4260796417799,5.93732340336089,8.37747362010854,9.37694451171927,18.2831820336008,2.8369261234557,5.60540024096017,16.3311632416883,10.429658368404,11.0766310799609,19.9781835869012,2.57794345191295,9.81033401066742,1.26753171787165,1.27562579979026,1.04829322754188,1.90958672949042,3.60424542819615,1.76798145366788,0,0.59675003159727,0.730656615058536,0,0,0,0.426730222566507,0,0,0,0,0,0,0,1.32171328579026,1.12101712596307,0,0.196709770113833,1.17903228824749,0.822405995998037,0,0,0,0,0.668462741311041,0.589211814949674,1.32920336750173,0,0,0.260118695119756,0.657751618414705,0.829050053357545,0.289803085735052,0.593146252648242,0.802622484269139,0,0.339928028092699,0.766440987203842,0.68725489096526,2.02415753615602,0,0.651083453856419,1.90090408889675,0.903450714466637,1.91979916731628,0,1.4206635122641,1.64225599384209,0,2.94184215361858,0.868946423296794,2.43806866313962,2.01210257911091,0.383587685530591,1.44575660953827,0.50133791063589,1.73815822752988,0,0,2.07976597760949,2.21729397462564,2.98638271356629,0.261958150995425,0,0.741568885568859,0,0.870648686496336,1.99436940778298,0,0,0,0,0,0,0,0.838998872419812,1.37559020970034,0.626984899610432,0.775250277507987,0,1.33888245105868,0.402829317109147,0,0.976248230192678,1.10298924103761,0.81014194788176,1.60739510911344,1.12264686313085,0.563057402416611,0,0,0.732806975721629,0,0,0,3.97577561356255,2.27934920996244,1.45650098894541,1.72101972449288,3.19201543978521,0.560677600142307,0,1.48000529050296,0.622422070799533,0.942974704487816,1.47115712802113,0,0.576175924479999,0,1.87296046098192,0,1.49448680551801,2.23125547423153,1.61872944368132,1.40450806702248,1.22492502752936,1.96534907698829,0.413303124703062,0,2.71993622206413,0,0,0.336672227908132,1.25118519871964,0.277064115484183,0,4.29082914118628,0.300476117813194,2.04177929688038,2.33206526395521,0.427114777637135,0,1.20036438433761,1.54578793857658,3.86460810068444,0.37223371266318,1.0126579934476,1.75386609290158,3.02920529092937,0.644349290496095,1.2931684545505,2.84007674013291,2.11579406278045,0.508681776931463,2.70565194428616,2.18196896472668,1.72082757233402,0,0,0.116193942869518,0.829288440122964,0,0,0,3.21620469096443,0,4.17931135228781,2.88751792667834,0.354920400119532,0.337169380156203,0.964044119533928,1.43382164552112,1.08939722046203,0.949082476444386,1.21348177344148,1.37355025587742,0.38474715694639,0,0,0,0,0,0,0,0,0,0.857839051492628,1.09750285408626,1.1240175325762,3.31745608958382,1.85176890317059,0,1.03993478527958,1.44331342025273,0.927443239800615,0.587043471179108,0.577465791044295,0.925971025153221,0.951270761172991,0,0,0.492434012174795,0.702012795417713,0.891786973732369,0.93733833986777,5.87937448696008,5.81277898693785,0.985143749731331,0.581267877027924,0.383382679165211,2.95597942737566,0.792435906119034,4.35389042635621,2.45003920808834,1.76739406796932,0,0,0,1.71072446022705,0.616964956219941,0.600686115687835,0,0.112131084345361,0.43596006883328,1.24675085895615,0.775630294546667,0,2.535908257668,0.26593811658487,3.12022310734098,0.257207374262142,0,0.266422179016099,0.714889968290738,0.542621605391443,0.823240336780769,0.325736184293735,0,0.791951872933429,0.904318131178758,2.61460037580088,3.19913571782583,1.2162378064119,1.50677127429638,8.43335757932127,1.91699884393266,0,0,1.59259437334337,3.6985738059069,0.895304816199478,0,0.197030760201927,1.2937654491571,0.513372145118994,0.508189248444927,0,0,0,2.55175500661265,2.24702107184155,0,0,0.736148950314839,2.00068208423871,0.542530047399471,1.87173775377726,13.0253161821928,3.15404830067869,1.40569697991256,0,0,3.10419213877515,1.32845119707087,0,2.08520674723399,0,0,0.413536052245775,2.80428461064202,0.853820462427555,0.303127571446259,0,0.604780586659361,1.48864684691266,2.14846762603287,4.77122160536225,1.28139149255701,2.04682899626681,1.76939313257968,1.48418066444991,4.93471020168498,2.13074070375753,0.574890092096664,3.11552657510173,4.29978400301849,0,3.80962293576241,6.26150724764095,0.918515585316854,1.82091168006717,2.36023946926963,0,0.693138033939733,0,0,0.316654886678627,0,0.340187410553031,2.37507507712353,0,0,0,0,0,0,0.219259876645935,0,2.05160100093111,0.328014645699706,0.976135183992909,0.721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| ||
|short_description=p@chr9:75778388..75778419,+ | |short_description=p@chr9:75778388..75778419,+ | ||
}} | }} |
Latest revision as of 02:42, 1 August 2015
Short description: | p@chr9:75778388..75778419, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:75778388..75778419, + |
Coexpression cluster: | C827_CD14_throat_tongue_chorionic_esophagus_endometrioid_Olfactory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.13e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.13e-24 | 42 |
defensive cell | 1.43e-22 | 48 |
phagocyte | 1.43e-22 | 48 |
granulocyte monocyte progenitor cell | 6.65e-18 | 67 |
macrophage dendritic cell progenitor | 4.02e-17 | 61 |
myeloid lineage restricted progenitor cell | 1.21e-16 | 66 |
monopoietic cell | 2.13e-16 | 59 |
monocyte | 2.13e-16 | 59 |
monoblast | 2.13e-16 | 59 |
promonocyte | 2.13e-16 | 59 |
somatic stem cell | 2.63e-16 | 433 |
myeloid leukocyte | 6.63e-16 | 72 |
stem cell | 1.12e-15 | 441 |
multi fate stem cell | 1.18e-15 | 427 |
mesenchymal cell | 8.19e-15 | 354 |
connective tissue cell | 4.70e-14 | 361 |
motile cell | 2.56e-11 | 386 |
myeloid cell | 6.73e-07 | 108 |
common myeloid progenitor | 6.73e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.37e-17 | 76 |
bone element | 3.06e-16 | 82 |
skeletal element | 1.23e-15 | 90 |
skeletal system | 5.71e-15 | 100 |
musculoskeletal system | 2.53e-14 | 167 |
connective tissue | 8.53e-14 | 371 |
mesoderm | 5.38e-13 | 315 |
mesoderm-derived structure | 5.38e-13 | 315 |
presumptive mesoderm | 5.38e-13 | 315 |
hematopoietic system | 3.72e-12 | 98 |
blood island | 3.72e-12 | 98 |
immune system | 1.96e-11 | 93 |
lateral plate mesoderm | 6.85e-10 | 203 |
hemolymphoid system | 9.14e-10 | 108 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.91e-07 | 14 |