FFCP PHASE1:Hg19::chr9:75775713..75775739,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:75775713..75775739,+ to FFCP PHASE1:Hg19::chr9:75775713..75775739,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:75775713..75775739,+ | |||
|coexpression_cluster_id=C827 | |||
|description=CAGE_peak_at_chr9:75775713..75775739,+ | |||
|id=chr9:75775713..75775739,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.03e-16!45;CL:0002057!1.11e-16!42;CL:0000557!1.04e-12!71;CL:0000839!4.07e-12!70;CL:0000766!2.40e-11!76;CL:0002009!4.06e-11!65;CL:0002194!1.40e-10!63;CL:0000576!1.40e-10!63;CL:0000040!1.40e-10!63;CL:0000559!1.40e-10!63;CL:0000548!6.34e-08!679;CL:0000004!6.34e-08!679;CL:0000255!6.34e-08!679;CL:0000012!6.95e-08!682;CL:0000144!1.10e-07!625;CL:0000048!1.13e-07!430;CL:0000723!1.66e-07!436;CL:0000034!7.06e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.38e-35;33!CL:0002057;4.38e-35;33!CL:0000473;2.03e-25;39!CL:0000234;2.03e-25;39!CL:0000576;2.82e-17;48!CL:0000766;3.24e-12;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.91e-31,42;CL:0002057,6.91e-31,42;CL:0000473,1.30e-27,48;CL:0000234,1.30e-27,48;CL:0000557,7.78e-24,67;CL:0000839,7.71e-23,66;CL:0000766,1.49e-21,72;CL:0002009,1.64e-20,61;CL:0002194,4.87e-20,59;CL:0000576,4.87e-20,59;CL:0000040,4.87e-20,59;CL:0000559,4.87e-20,59;CL:0000763,1.14e-11,108;CL:0000049,1.14e-11,108;CL:0002031,2.22e-09,120;CL:0000048,7.27e-08,427;CL:0000723,7.51e-08,433;CL:0000738,7.88e-08,136;CL:0000034,9.48e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.20e-23;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;9.55e-07;3!DOID:127;9.55e-07;3 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!2.31e-13!167;UBERON:0002371!1.83e-12!80;UBERON:0001474!1.54e-11!86;UBERON:0004765!5.06e-11!101;UBERON:0001434!5.06e-11!101;UBERON:0003081!1.41e-08!216;UBERON:0002193!3.28e-07!112;UBERON:0002390!5.47e-07!102;UBERON:0003061!5.47e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.17e-22,76;UBERON:0001474,6.73e-20,82;UBERON:0002405,2.31e-18,93;UBERON:0004765,2.69e-18,90;UBERON:0001434,2.27e-16,100;UBERON:0002390,9.71e-16,98;UBERON:0003061,9.71e-16,98;UBERON:0002193,4.60e-15,108;UBERON:0002204,5.02e-15,167;UBERON:0003081,1.24e-13,203;UBERON:0000926,9.62e-10,315;UBERON:0004120,9.62e-10,315;UBERON:0006603,9.62e-10,315 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.704772020479856,0,0,1.74467704820074,0,0,0,0,0,0,0.263766978228454,0.495065411840187,0,2.6893005858071,0.602694528023977,0.730310090387373,0.975865597581014,0,0.204000691244253,0,0.286235987131057,0.958120975510189,0.502170558379211,0,0,0,0.393364276848904,0.383829398097213,0.309632246632152,0.919421224478927,0,0.739508020333575,0,0,0.293600439334847,0.553995408531877,0.200544447470142,1.30206522429511,0,0,0,3.63495596948912,3.02300754951048,4.36651310138069,2.55671940596253,1.6446715520873,2.16794459626573,3.16461631554365,1.7931249457037,4.96612682766029,5.17118521104928,1.29096936716765,2.70852973188684,3.57660445130949,1.63743690034707,1.79778787556068,8.87643287875617,1.92557416245656,0,3.95821560224059,3.59034583718937,3.40979800426155,3.77272010217159,1.13477044938228,1.86846674698672,3.76872997885115,5.73631210262222,2.82345498116652,3.02699751316684,1.47311054395026,4.43047342417238,0.211255286311942,0.425208599930087,0.628975936525128,0.673971786878971,0.300353785683013,0.16072558669708,0,0.79566670879636,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0.393419540227666,1.17903228824749,0.411202997999018,0,0,0,0,0,0,0.443067789167242,0,0.128091319725675,0.130059347559878,0.493313713811028,0.276350017785848,0,0.444859689486181,0.267540828089713,0,0.226618685395132,0,0.34362744548263,0.506039384039006,0.637130828648193,0.651083453856419,0,0.903450714466637,0.511946444617674,0,0.710331756132051,0,0.403213486449465,0.802320587350522,0.289648807765598,0,1.34140171940727,0.12786256184353,0,0,0.579386075843295,0,1.45990461090791,0.756278537312543,1.33037638477538,0.702678285545008,0.0654895377488563,0,0.370784442784429,0.97364218096405,0.522389211897802,0.664789802594326,0,0,0,0,0,0.347140501607594,0,0,0.550236083880135,0.417989933073621,0.775250277507987,1.06729878806013,0.33472061276467,0,0,0.24406205754817,0,0,0.267899184852239,0.22452937262617,0.112611480483322,1.53316637465883,0,0.183201743930407,0,0,0.436094052142534,1.49091585508596,0.633152558322899,0.264818361626438,0.573673241497627,0.354668382198357,1.12135520028461,0,0.74000264525148,0.311211035399766,0.134710672069688,0.326923806226917,0,0,0,0.936480230490962,0,0.896692083310806,0.822041490506354,0.809364721840658,0.421352420106746,0,0.61417158655884,0.206651562351531,0,0,0,0,0.336672227908132,0.500474079487857,0.554128230968366,0,0.919463387397059,0,1.24775401476023,1.07633781413317,0.213557388818567,0.211931901159562,0.300091096084402,0.412210116953756,1.28820270022815,0.558350568994769,0.675105328965065,0.68205903612839,0.252433774244115,0.276149695926898,0.161646056818812,2.13005755509969,0.503760491138201,0,1.93260853163297,0.818238361772504,0.573609190778008,0,0,0,0.310983165046111,0,0,0,1.28648187638577,0,1.85747171212792,0,0.236613600079688,0.674338760312407,0.241011029883482,0.661763836394364,0,0,0.539325232640658,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,1.00528972411631,0.370353780634118,0,0,0,0.463721619900307,0.117408694235822,0.144366447761074,1.85194205030644,0.761016608938393,0,0,0,1.40402559083543,0.297262324577456,0,1.6798212819886,0.425325291727159,0.268675568108545,0,0,2.95597942737566,0.616339038092582,2.48793738648926,2.45003920808834,1.51490920111656,0,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0.1466765716419,0.387815147273333,0,0.845302752556,0.26593811658487,0,0.257207374262142,0,0,0.142977993658148,0.542621605391443,0.823240336780769,0,0.355391948742546,1.58390374586686,0.904318131178758,0.871533458600294,0.499864955910285,0,0,0,0,1.14861935834114,0,1.59259437334337,1.43833425785268,0.895304816199478,0,0.197030760201927,0.431255149719035,0,0,0,0,0,0.637938751653163,0,2.99161459204025,0,0.12269149171914,0,0.271265023699736,1.24782516918484,5.17444067511769,1.10391690523754,2.34282829985426,0,0,0,0,0.184369168541703,0.781952530212746,0,0,0,0.862856803274467,0.213455115606889,0.303127571446259,1.66435439510497,0,0,1.2276957863045,0,0.384417447767103,0,0.321707842287215,0,0.308419387605311,0.532685175939381,0.328508624055237,1.03850885836724,1.04589340613963,0,0.802025881213139,2.76242966807689,0.229628896329213,0,0.917870904715969,0,0.308061348417659,0,0,0.105551628892876,0,0.170093705276516,1.0795795805107,0,0,0,0,0,0.447749509444357,0,0.261435451024901,0.512900250232778,0,0,0.515205058238611,0.732555718546747,0.247528499761764,0,0,1.6068392984416,0,0.770243085573222,0.921022048356777,0,0.214840489736547,0.870100163485371,0.767039646744908,0,0.991709492165869,0.192190067365106,0.382838137483752,0.30347334256665,0,0.31481234683064,1.3940745403212,0,0.532306030317022,1.73986598415015,0.37064843820784,0.858749320451947,0,0,0.190630193923825,0,0.855877976067841,0.318203247925937,0,0,0.274537029736055,0.471249609382746,0,1.58510321173008,0.842516912477962,0,0.974853958525138,1.05650146756755,0.136499911407986,0.424216295861138,1.13008116620243,0,1.99031692572366,1.31535265576129,0,1.31178950409327,0.405820753925408,0.6196469961995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| ||
|short_description=p@chr9:75775713..75775739,+ | |||
}} | }} |
Latest revision as of 02:42, 1 August 2015
Short description: | p@chr9:75775713..75775739, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:75775713..75775739, + |
Coexpression cluster: | C827_CD14_throat_tongue_chorionic_esophagus_endometrioid_Olfactory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.91e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.91e-31 | 42 |
defensive cell | 1.30e-27 | 48 |
phagocyte | 1.30e-27 | 48 |
granulocyte monocyte progenitor cell | 7.78e-24 | 67 |
myeloid lineage restricted progenitor cell | 7.71e-23 | 66 |
myeloid leukocyte | 1.49e-21 | 72 |
macrophage dendritic cell progenitor | 1.64e-20 | 61 |
monopoietic cell | 4.87e-20 | 59 |
monocyte | 4.87e-20 | 59 |
monoblast | 4.87e-20 | 59 |
promonocyte | 4.87e-20 | 59 |
myeloid cell | 1.14e-11 | 108 |
common myeloid progenitor | 1.14e-11 | 108 |
hematopoietic lineage restricted progenitor cell | 2.22e-09 | 120 |
multi fate stem cell | 7.27e-08 | 427 |
somatic stem cell | 7.51e-08 | 433 |
leukocyte | 7.88e-08 | 136 |
stem cell | 9.48e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.17e-22 | 76 |
bone element | 6.73e-20 | 82 |
immune system | 2.31e-18 | 93 |
skeletal element | 2.69e-18 | 90 |
skeletal system | 2.27e-16 | 100 |
hematopoietic system | 9.71e-16 | 98 |
blood island | 9.71e-16 | 98 |
hemolymphoid system | 4.60e-15 | 108 |
musculoskeletal system | 5.02e-15 | 167 |
lateral plate mesoderm | 1.24e-13 | 203 |
mesoderm | 9.62e-10 | 315 |
mesoderm-derived structure | 9.62e-10 | 315 |
presumptive mesoderm | 9.62e-10 | 315 |