FFCP PHASE1:Hg19::chr9:75774236..75774296,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:75774236..75774296,+ to FFCP PHASE1:Hg19::chr9:75774236..75774296,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:75774236..75774296,+ | |||
|coexpression_cluster_id=C827 | |||
|description=CAGE_peak_at_chr9:75774236..75774296,+ | |||
|id=chr9:75774236..75774296,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.46e-18!42;CL:0000860!2.45e-17!45;CL:0000557!3.74e-16!71;CL:0000839!3.36e-15!70;CL:0000766!3.57e-15!76;CL:0002009!2.11e-14!65;CL:0002194!3.68e-14!63;CL:0000576!3.68e-14!63;CL:0000040!3.68e-14!63;CL:0000559!3.68e-14!63;CL:0000012!1.90e-08!682;CL:0000548!3.00e-08!679;CL:0000004!3.00e-08!679;CL:0000255!3.00e-08!679;CL:0000144!8.07e-08!625;CL:0002371!1.30e-07!591;CL:0000763!1.52e-07!112;CL:0000049!1.52e-07!112;CL:0000048!2.38e-07!430;CL:0000723!3.83e-07!436;CL:0000063!7.20e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.36e-23;33!CL:0002057;2.36e-23;33!CL:0000473;2.33e-18;39!CL:0000234;2.33e-18;39!CL:0000576;1.49e-10;48!CL:0000766;1.46e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.03e-19,42;CL:0002057,5.03e-19,42;CL:0000473,2.72e-18,48;CL:0000234,2.72e-18,48;CL:0000557,1.19e-17,67;CL:0000839,3.89e-17,66;CL:0000766,9.26e-17,72;CL:0002194,2.51e-15,59;CL:0000576,2.51e-15,59;CL:0000040,2.51e-15,59;CL:0000559,2.51e-15,59;CL:0002009,2.88e-15,61;CL:0000763,1.32e-07,108;CL:0000049,1.32e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.73e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.12e-16!167;UBERON:0002371!2.70e-16!80;UBERON:0004765!1.07e-15!101;UBERON:0001434!1.07e-15!101;UBERON:0001474!3.42e-15!86;UBERON:0002390!7.81e-11!102;UBERON:0003061!7.81e-11!102;UBERON:0002193!4.06e-10!112;UBERON:0000926!7.50e-10!448;UBERON:0004120!7.50e-10!448;UBERON:0006603!7.50e-10!448;UBERON:0003081!7.47e-09!216;UBERON:0002405!2.57e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.21e-17,76;UBERON:0004765,1.17e-16,90;UBERON:0001474,8.09e-16,82;UBERON:0001434,2.38e-15,100;UBERON:0002204,2.60e-14,167;UBERON:0002405,1.23e-13,93;UBERON:0002390,3.86e-11,98;UBERON:0003061,3.86e-11,98;UBERON:0002193,1.33e-10,108;UBERON:0003081,3.35e-08,203;UBERON:0000926,1.31e-07,315;UBERON:0004120,1.31e-07,315;UBERON:0006603,1.31e-07,315 | |||
|phase1_expression=1.81678379270557,3.63970890614671,1.26858963686374,2.00146596706261,1.34088328328186,1.74467704820074,0,1.26343974685366,0.522371256399677,0,0,0,0.527533956456907,1.36142988256051,1.65698687863958,6.05092631806598,3.01347264011988,0.730310090387373,1.46379839637152,0.123121058076788,0,0,0.286235987131057,1.36874425072884,1.00434111675842,0,0,0.0787107813136792,1.57345710739562,3.0706351847777,3.2511385896376,6.43594857135249,0,1.47901604066715,0,0,0.293600439334847,1.66198622559563,0.802177789880567,2.60413044859022,0.223915474239924,0,1.03030227053675,8.72389432677388,4.1566353805769,7.76268995801012,11.6214518452842,6.98985409637104,7.43295290148249,7.76769459269806,7.42866048934392,7.09446689665756,15.5135556331478,7.74581620300591,8.12558919566051,11.4827827120989,7.64137220161968,7.41587498668779,14.3859429414324,6.73950956859797,11.5080682643827,11.5447955065351,6.38283704389222,4.26224750532694,15.9615081245721,4.53908179752912,8.71951148593805,12.8136819280939,11.4726242052444,6.08128765174327,9.08099253950053,8.10210799172642,10.4432587855492,0.633765858935825,0.425208599930087,0.419317291016752,1.79725809834392,3.45406853535464,1.6072558669708,0.285012743741249,0.59675003159727,0.91332076882317,0,0,0,0.426730222566507,0,0,0,0,0,0,0,1.32171328579026,1.12101712596307,0.263384084775077,0.393419540227666,1.17903228824749,1.23360899399706,0,0,0,0,0.334231370655521,0,0.443067789167242,0.541607727530031,0.128091319725675,0.650296737799391,0.822189523018381,0.276350017785848,0.289803085735052,0.296573126324121,1.07016331235885,0,0.566546713487831,1.53288197440768,1.71813722741315,1.51811815211702,0.318565414324097,1.30216690771284,0,0.752875595388864,0.383959833463255,0,1.18388626022008,0,0.604820229674197,1.33720097891754,1.01377082717959,14.6284119788377,0,0.511450247374121,1.80719576192283,0,1.73815822752988,0,1.45990461090791,1.51255707462509,1.99556457716308,1.22968699970376,0,0.364295288292542,0.741568885568859,1.62273696827342,1.74129737299267,1.32957960518865,0,0,0.74291500265913,0.39752481473341,0,0,0.56530794192401,0.419499436209906,0,0.626984899610432,1.29208379584664,0.35576626268671,1.67360306382335,0.402829317109147,2.28081631715554,0.24406205754817,0.367663080345869,0,0.803697554556718,0.673588117878509,1.68917220724983,0,0,0.916008719652036,0,0,0,4.47274756525787,1.39293562831038,1.58891016975863,0.286836620748814,1.77334191099179,2.24271040056923,0,1.48000529050296,0,0.67355336034844,1.47115712802113,0,1.15235184896,0.234321431833797,1.24864030732128,0,1.19558944441441,1.05691048779388,1.45685649931318,1.12360645361799,1.22492502752936,0.245668634623536,0.826606249406124,0,2.22540236350701,0,0,0.336672227908132,0.500474079487857,1.10825646193673,0.438977620880838,1.83892677479412,0.600952235626387,0.794025282120147,1.25572744982203,0.85422955527427,1.69545520927649,2.40072876867522,1.44273540933814,3.09168648054755,0.744467425326359,2.36286865137773,1.16924406193438,1.00973509697646,0.920498986422993,0.80823028409406,4.26011511019937,1.20902517873168,0.339121184620975,4.44499962275583,3.81844568827169,2.86804595389004,0,0,0.348581828608555,0.414644220061482,0,0,0,1.28648187638577,0,2.3218396401599,1.44375896333917,1.30137480043828,0.674338760312407,0.241011029883482,0.772057809126758,0.871517776369625,0.237270619111097,0.539325232640658,0.784885860501384,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0,1.02940686179115,1.20725313949488,0,2.6137532827024,1.11106134190236,0.325808305310325,0,1.44331342025273,0.463721619900307,0.469634776943287,1.15493158208859,0.462985512576611,1.90254152234598,0,0,0.738651018262192,1.17002132569619,1.33768046059855,2.81201501960331,2.35174979478403,2.69372684760534,0.895585227028483,2.3250715081117,0.383382679165211,8.37527504423104,2.28925928434388,8.29312462163088,9.07955706526857,4.67097003677606,0.063497894292169,0,0,0,0.822619941626588,0.300343057843917,0,0,0.43596006883328,1.10007428731425,0.517086863031111,0,2.535908257668,0.531876233169741,1.04007436911366,0.514414748524284,1.41849132023278,0.266422179016099,1.28680194292333,0,0.823240336780769,0.325736184293735,0.355391948742546,0.791951872933429,1.20575750823834,0.871533458600294,2.59929777073348,1.2162378064119,0.502257091432126,8.43335757932127,0.479249710983165,1.14861935834114,0,2.46128221334885,2.05476322550383,1.79060963239896,0.112085143993527,0,1.2937654491571,0.898401253958239,0.254094624222463,0,0.773288812777695,0.167516265334349,3.18969375826582,0.749007023947182,0,0.414415513436035,0.12269149171914,1.00034104211935,0.813795071099207,3.53550464602372,5.70972764150918,3.46945313074656,3.16281820480326,0.902838299183157,0,0,0.664225598535437,0.368738337083406,0.695068915744663,0,0,0.206768026122887,1.2942852049117,0.853820462427555,0.303127571446259,0,0.604780586659361,1.24053903909388,1.07423381301644,1.68396056659844,1.15325234330131,2.04682899626681,1.28683136914886,0,0.616838775210622,1.06537035187876,0.9033987161519,2.07701771673448,1.74315567689939,0,2.606584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|phase1_expression=1.81678379270557,3.63970890614671,1.26858963686374,2.00146596706261,1.34088328328186,1.74467704820074,0,1.26343974685366,0.522371256399677,0,0,0,0.527533956456907,1.36142988256051,1.65698687863958,6.05092631806598,3.01347264011988,0.730310090387373,1.46379839637152,0.123121058076788,0,0,0.286235987131057,1.36874425072884,1.00434111675842,0,0,0.0787107813136792,1.57345710739562,3.0706351847777,3.2511385896376,6.43594857135249,0,1.47901604066715,0,0,0.293600439334847,1.66198622559563,0.802177789880567,2.60413044859022,0.223915474239924,0,1.03030227053675,8.72389432677388,4.1566353805769,7.76268995801012,11.6214518452842,6.98985409637104,7.43295290148249,7.76769459269806,7.42866048934392,7.09446689665756,15.5135556331478,7.74581620300591,8.12558919566051,11.4827827120989,7.64137220161968,7.41587498668779,14.3859429414324,6.73950956859797,11.5080682643827,11.5447955065351,6.38283704389222,4.26224750532694,15.9615081245721,4.53908179752912,8.71951148593805,12.8136819280939,11.4726242052444,6.08128765174327,9.08099253950053,8.10210799172642,10.4432587855492,0.633765858935825,0.425208599930087,0.419317291016752,1.79725809834392,3.45406853535464,1.6072558669708,0.285012743741249,0.59675003159727,0.91332076882317,0,0,0,0.426730222566507,0,0,0,0,0,0,0,1.32171328579026,1.12101712596307,0.263384084775077,0.393419540227666,1.17903228824749,1.23360899399706,0,0,0,0,0.334231370655521,0,0.443067789167242,0.541607727530031,0.128091319725675,0.650296737799391,0.822189523018381,0.276350017785848,0.289803085735052,0.296573126324121,1.07016331235885,0,0.566546713487831,1.53288197440768,1.71813722741315,1.51811815211702,0.318565414324097,1.30216690771284,0,0.752875595388864,0.383959833463255,0,1.18388626022008,0,0.604820229674197,1.33720097891754,1.01377082717959,14.6284119788377,0,0.511450247374121,1.80719576192283,0,1.73815822752988,0,1.45990461090791,1.51255707462509,1.99556457716308,1.22968699970376,0,0.364295288292542,0.741568885568859,1.62273696827342,1.74129737299267,1.32957960518865,0,0,0.74291500265913,0.39752481473341,0,0,0.56530794192401,0.419499436209906,0,0.626984899610432,1.29208379584664,0.35576626268671,1.67360306382335,0.402829317109147,2.28081631715554,0.24406205754817,0.367663080345869,0,0.803697554556718,0.673588117878509,1.68917220724983,0,0,0.916008719652036,0,0,0,4.47274756525787,1.39293562831038,1.58891016975863,0.286836620748814,1.77334191099179,2.24271040056923,0,1.48000529050296,0,0.67355336034844,1.47115712802113,0,1.15235184896,0.234321431833797,1.24864030732128,0,1.19558944441441,1.05691048779388,1.45685649931318,1.12360645361799,1.22492502752936,0.245668634623536,0.826606249406124,0,2.22540236350701,0,0,0.336672227908132,0.500474079487857,1.10825646193673,0.438977620880838,1.83892677479412,0.600952235626387,0.794025282120147,1.25572744982203,0.85422955527427,1.69545520927649,2.40072876867522,1.44273540933814,3.09168648054755,0.744467425326359,2.36286865137773,1.16924406193438,1.00973509697646,0.920498986422993,0.80823028409406,4.26011511019937,1.20902517873168,0.339121184620975,4.44499962275583,3.81844568827169,2.86804595389004,0,0,0.348581828608555,0.414644220061482,0,0,0,1.28648187638577,0,2.3218396401599,1.44375896333917,1.30137480043828,0.674338760312407,0.241011029883482,0.772057809126758,0.871517776369625,0.237270619111097,0.539325232640658,0.784885860501384,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0,1.02940686179115,1.20725313949488,0,2.6137532827024,1.11106134190236,0.325808305310325,0,1.44331342025273,0.463721619900307,0.469634776943287,1.15493158208859,0.462985512576611,1.90254152234598,0,0,0.738651018262192,1.17002132569619,1.33768046059855,2.81201501960331,2.35174979478403,2.69372684760534,0.895585227028483,2.3250715081117,0.383382679165211,8.37527504423104,2.28925928434388,8.29312462163088,9.07955706526857,4.67097003677606,0.063497894292169,0,0,0,0.822619941626588,0.300343057843917,0,0,0.43596006883328,1.10007428731425,0.517086863031111,0,2.535908257668,0.531876233169741,1.04007436911366,0.514414748524284,1.41849132023278,0.266422179016099,1.28680194292333,0,0.823240336780769,0.325736184293735,0.355391948742546,0.791951872933429,1.20575750823834,0.871533458600294,2.59929777073348,1.2162378064119,0.502257091432126,8.43335757932127,0.479249710983165,1.14861935834114,0,2.46128221334885,2.05476322550383,1.79060963239896,0.112085143993527,0,1.2937654491571,0.898401253958239,0.254094624222463,0,0.773288812777695,0.167516265334349,3.18969375826582,0.749007023947182,0,0.414415513436035,0.12269149171914,1.00034104211935,0.813795071099207,3.53550464602372,5.70972764150918,3.46945313074656,3.16281820480326,0.902838299183157,0,0,0.664225598535437,0.368738337083406,0.695068915744663,0,0,0.206768026122887,1.2942852049117,0.853820462427555,0.303127571446259,0,0.604780586659361,1.24053903909388,1.07423381301644,1.68396056659844,1.15325234330131,2.04682899626681,1.28683136914886,0,0.616838775210622,1.06537035187876,0.9033987161519,2.07701771673448,1.74315567689939,0,2.606584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| ||
|short_description=p@chr9:75774236..75774296,+ | |||
}} | }} |
Latest revision as of 02:42, 1 August 2015
Short description: | p@chr9:75774236..75774296, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:75774236..75774296, + |
Coexpression cluster: | C827_CD14_throat_tongue_chorionic_esophagus_endometrioid_Olfactory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.03e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.03e-19 | 42 |
defensive cell | 2.72e-18 | 48 |
phagocyte | 2.72e-18 | 48 |
granulocyte monocyte progenitor cell | 1.19e-17 | 67 |
myeloid lineage restricted progenitor cell | 3.89e-17 | 66 |
myeloid leukocyte | 9.26e-17 | 72 |
monopoietic cell | 2.51e-15 | 59 |
monocyte | 2.51e-15 | 59 |
monoblast | 2.51e-15 | 59 |
promonocyte | 2.51e-15 | 59 |
macrophage dendritic cell progenitor | 2.88e-15 | 61 |
myeloid cell | 1.32e-07 | 108 |
common myeloid progenitor | 1.32e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.21e-17 | 76 |
skeletal element | 1.17e-16 | 90 |
bone element | 8.09e-16 | 82 |
skeletal system | 2.38e-15 | 100 |
musculoskeletal system | 2.60e-14 | 167 |
immune system | 1.23e-13 | 93 |
hematopoietic system | 3.86e-11 | 98 |
blood island | 3.86e-11 | 98 |
hemolymphoid system | 1.33e-10 | 108 |
lateral plate mesoderm | 3.35e-08 | 203 |
mesoderm | 1.31e-07 | 315 |
mesoderm-derived structure | 1.31e-07 | 315 |
presumptive mesoderm | 1.31e-07 | 315 |