FFCP PHASE1:Hg19::chr9:35685445..35685517,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:35685445..35685517,+ | |||
|coexpression_cluster_id=C638 | |||
|description=CAGE_peak_at_chr9:35685445..35685517,+ | |description=CAGE_peak_at_chr9:35685445..35685517,+ | ||
|id=chr9:35685445..35685517,+ | |id=chr9:35685445..35685517,+ | ||
|ontology_enrichment_celltype=CL:0000055!8.78e-34!180;CL:0000680!1.52e-24!57;CL:0000056!1.52e-24!57;CL:0000355!1.52e-24!57;CL:0000187!7.25e-24!54;CL:0000183!9.10e-24!59;CL:0000393!3.55e-23!60;CL:0000211!3.55e-23!60;CL:0000192!6.73e-20!42;CL:0000514!6.73e-20!42;CL:0000359!1.13e-16!32;CL:0000222!1.26e-14!119;CL:0000057!1.14e-12!75;CL:0000220!9.90e-08!246;CL:0002321!1.10e-07!248 | |ontology_enrichment_celltype=CL:0000055!8.78e-34!180;CL:0000680!1.52e-24!57;CL:0000056!1.52e-24!57;CL:0000355!1.52e-24!57;CL:0000187!7.25e-24!54;CL:0000183!9.10e-24!59;CL:0000393!3.55e-23!60;CL:0000211!3.55e-23!60;CL:0000192!6.73e-20!42;CL:0000514!6.73e-20!42;CL:0000359!1.13e-16!32;CL:0000222!1.26e-14!119;CL:0000057!1.14e-12!75;CL:0000220!9.90e-08!246;CL:0002321!1.10e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.49e-17;32!CL:0000192;5.16e-16;43!CL:0000187;3.40e-15;55!CL:0000393;2.61e-13;61!CL:0000211;2.61e-13;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,2.62e-28,58;CL:0000056,2.62e-28,58;CL:0000355,2.62e-28,58;CL:0000187,1.61e-27,55;CL:0000393,1.63e-26,61;CL:0000211,1.63e-26,61;CL:0000192,6.39e-23,43;CL:0000514,6.39e-23,43;CL:0000359,5.45e-19,32;CL:0000222,5.16e-16,121;CL:0000057,1.07e-14,76;CL:0000048,1.32e-08,427;CL:0000723,9.09e-08,433;CL:0000034,5.96e-07,441;CL:0002321,7.48e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;5.16e-16;43!CL:0000355;1.11e-14;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!4.28e-30!70;UBERON:0000914!8.40e-30!83;UBERON:0002329!8.40e-30!83;UBERON:0003077!8.40e-30!83;UBERON:0003059!8.40e-30!83;UBERON:0007282!8.40e-30!83;UBERON:0009618!8.40e-30!83;UBERON:0007285!8.40e-30!83;UBERON:0002385!1.46e-27!63;UBERON:0001015!1.46e-27!63;UBERON:0000383!1.46e-27!63;UBERON:0001134!2.39e-27!61;UBERON:0002036!2.39e-27!61;UBERON:0003082!2.39e-27!61;UBERON:0000486!2.05e-24!82;UBERON:0005256!2.82e-20!143;UBERON:0003104!1.65e-15!238;UBERON:0009142!1.65e-15!238;UBERON:0002100!3.18e-14!216;UBERON:0000926!1.88e-13!448;UBERON:0004120!1.88e-13!448;UBERON:0006603!1.88e-13!448;UBERON:0001637!1.98e-13!42;UBERON:0003509!1.98e-13!42;UBERON:0004572!1.98e-13!42;UBERON:0004872!2.86e-12!84;UBERON:0000481!4.55e-12!347;UBERON:0000468!4.43e-11!659;UBERON:0000490!5.49e-11!138;UBERON:0002204!7.76e-11!167;UBERON:0001981!9.09e-11!60;UBERON:0007500!9.09e-11!60;UBERON:0004537!9.09e-11!60;UBERON:0006965!9.09e-11!60;UBERON:0004573!1.25e-10!33;UBERON:0004571!1.25e-10!33;UBERON:0002049!4.89e-10!79;UBERON:0007798!4.89e-10!79;UBERON:0003914!2.30e-08!118;UBERON:0000475!3.37e-08!365;UBERON:0000055!3.64e-08!69;UBERON:0001009!1.64e-07!113;UBERON:0004535!3.42e-07!110;UBERON:0000922!4.03e-07!612;UBERON:0000467!7.53e-07!625;UBERON:0001135!7.53e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;2.17e-14;31!UBERON:0001015;2.17e-14;31!UBERON:0000383;2.17e-14;31!UBERON:0004573;2.94e-10;33!UBERON:0004571;2.94e-10;33!UBERON:0001637;4.50e-10;42!UBERON:0003509;4.50e-10;42!UBERON:0004572;4.50e-10;42!UBERON:0001134;4.72e-09;16!UBERON:0002036;4.72e-09;16!UBERON:0002204;2.88e-08;70!UBERON:0001135;3.68e-07;15 | |||
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|phase1_expression=10.3556676184217,11.5614282901131,7.75249222527841,27.0197905553452,21.9010936269371,27.0424942471114,17.7309914717817,1.89515962028049,0.261185628199839,2.94880723801811,4.88460817580699,0.218441372130172,0.791300934685361,4.20805600064159,8.61633176892581,20.1697543935533,15.0673632005994,13.8758917173601,20.0052447504108,1.60057375499824,2.65200898617529,7.20945859399602,0.572471974262113,3.96935832711364,4.3939923858181,0.0764134057479513,0,0,0,0,0.77408061658038,2.75826367343678,1.8072355126695,1.10926203050036,0,0,0,0,0,0,0,0,0,0.145398238779565,0.377875943688809,0.485168122375632,1.62700325833979,1.6446715520873,1.23882548358041,1.7261543539329,0.768482119587302,0.47296445977717,1.03423704220986,0.645484683583826,1.35426486594342,0.564727018627814,1.63743690034707,0,3.06083892370903,0.320929027076094,1.27867425159808,0.659702600373432,0.199463657621632,0.852449501065388,1.7412554317715,2.8369261234557,1.24564449799115,2.51248665256743,1.0429658368404,0.65156653411535,3.02699751316684,1.47311054395026,0.632924774881769,0.211255286311942,0,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0.334372990781356,0,0,0,0.334231370655521,0,0,0.270803863765016,0.384273959177026,0.390178042679635,0,0.552700035571697,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,7.31420598941885,1.34140171940727,4.98663991189768,7.95166135246046,11.5307719446255,4.92478164466801,0,2.91980922181582,1.13441780596881,3.76939975686359,3.33772185633879,0.72038491523742,0,1.11235332835329,0,0,0.26591592103773,1.43094374583205,0,0.371457501329565,0.39752481473341,3.4409383804245,0.694281003215189,0,1.67799774483962,1.37559020970034,1.46296476575767,0,0,0,0,0,0,0,3.24056779152704,0.625098097988558,1.79623498100936,1.80178368773316,1.53316637465883,0,1.09921046358244,1.31780417436063,0,2.61656431285521,16.4000744059455,2.40597972162702,5.56118559415519,2.0078563452417,1.77334191099179,15.6989728039846,13.8773694448616,8.38669664618344,0.622422070799533,3.23305612967251,4.57693328717684,1.66493170409425,2.30470369792,0.468642863667593,8.11616199758833,3.4228309292667,4.48346041655403,2.70099346880659,2.91371299862637,3.79217178096071,1.02077085627447,4.54486974053541,1.44656093646072,0,7.66527480763526,0.910161361938026,4.31170885089743,2.52504170931099,2.37725187756732,0,3.07284334616587,22.6800968891275,6.61047459189026,4.42385514324082,4.66413052791041,4.69826255400848,4.23863802319124,4.50136644126603,1.23663035086127,7.72921620136887,5.76962254627928,4.55696097051419,2.43592512902997,7.82544700156755,3.40584624976508,1.77810662500693,6.03516307278244,3.12331504505685,4.74769658469365,0.386521706326594,0.545492241181669,0.860413786167011,0.975789649036763,0.397589304964456,0.929551542956147,0.621966330092223,2.01856680700503,2.18986415445498,6.25798129319264,10.935095949279,12.4321429217232,9.75172648867156,13.7157101517221,3.43089720115547,3.37169380156203,1.92808823906786,4.08087699109858,4.57546832594053,4.50814176311084,4.58426447744559,3.72820783738158,6.54070166808864,0,1.40241773803446,5.7620361586396,8.82052268313252,0,0,0,0,0,3.60292401626904,0.109750285408626,0,0,0.648119116109707,1.95484983186195,3.11980435583874,5.77325368101093,0.927443239800615,6.92711295991348,0,0.925971025153221,0.761016608938393,0,0,0,0,0,0,1.84780341018745,1.13420077793909,1.79117045405697,0.871901815541886,3.06706143332169,0,0.968532774145487,0.207328115540772,0.144119953416961,0.12624243342638,0.952468414382536,0.381988425558278,0,0,0.308482478109971,0,0.857479297891735,0.224262168690721,2.1798003441664,0.95339771567235,6.59285750364667,3.57656445851882,5.071816515336,8.77595784730073,20.8014873822732,3.85811061393213,5.67396528093113,4.26275486425759,1.57275793023962,3.7983512377401,1.64648067356154,1.30294473717494,4.6200953336531,6.33561498346743,5.72734816413214,2.61460037580088,6.99810938274399,0,0,2.10833939483032,9.58499421966331,9.18895486672911,7.13184525203592,3.76431397335706,8.83548186966649,2.14873155887875,0,0,0.215627574859517,0,0.508189248444927,0,1.54657762555539,0.167516265334349,1.91381625495949,0,0,0,1.59498939234882,8.00272833695483,9.22301080579101,68.6303843051663,42.1092413561302,37.5331747780765,38.7738083625881,11.4359517896533,4.5481500811197,5.17365356462525,1.99267679560631,14.5651643147945,4.77859879574456,1.37060810223918,10.6374461381365,0,0,0,0,3.32870879020994,0.907170879989041,5.21026396419431,11.0492620767405,11.7877239661891,4.10045277618243,6.14048698880044,10.7772127166217,8.90508398669946,4.93471020168498,4.43904313282818,3.36721339656617,3.63478100428535,11.9696689813758,0,1.00253235151642,0.184161977871793,6.31479464905337,14.2031111045239,7.34296723772775,0.451199612907412,0,0,1.46139224653261,0.105551628892876,1.13733384070897,1.19065593693561,2.15915916102139,1.54227252690289,4.33514300070165,0.501689773854853,0.509752546090077,0.831076008928724,0.89549901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| ||
|short_description=p@chr9:35685445..35685517,+ | |short_description=p@chr9:35685445..35685517,+ | ||
}} | }} |
Latest revision as of 01:47, 1 August 2015
Short description: | p@chr9:35685445..35685517, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:35685445..35685517, + |
Coexpression cluster: | C638_skeletal_tongue_Adipocyte_diaphragm_penis_throat_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 2.62e-28 | 58 |
myoblast | 2.62e-28 | 58 |
multi-potent skeletal muscle stem cell | 2.62e-28 | 58 |
muscle cell | 1.61e-27 | 55 |
electrically responsive cell | 1.63e-26 | 61 |
electrically active cell | 1.63e-26 | 61 |
smooth muscle cell | 6.39e-23 | 43 |
smooth muscle myoblast | 6.39e-23 | 43 |
vascular associated smooth muscle cell | 5.45e-19 | 32 |
mesodermal cell | 5.16e-16 | 121 |
fibroblast | 1.07e-14 | 76 |
multi fate stem cell | 1.32e-08 | 427 |
somatic stem cell | 9.09e-08 | 433 |
stem cell | 5.96e-07 | 441 |
embryonic cell | 7.48e-07 | 250 |