FFCP PHASE1:Hg19::chr9:35685418..35685431,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:35685418..35685431,+ | |||
|coexpression_cluster_id=C638 | |||
|description=CAGE_peak_at_chr9:35685418..35685431,+ | |description=CAGE_peak_at_chr9:35685418..35685431,+ | ||
|id=chr9:35685418..35685431,+ | |id=chr9:35685418..35685431,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.33e-28!180;CL:0000183!7.31e-23!59;CL:0000680!1.10e-22!57;CL:0000056!1.10e-22!57;CL:0000355!1.10e-22!57;CL:0000187!9.98e-22!54;CL:0000393!6.10e-21!60;CL:0000211!6.10e-21!60;CL:0000192!2.00e-17!42;CL:0000514!2.00e-17!42;CL:0000359!2.84e-13!32;CL:0000057!4.72e-12!75;CL:0000222!1.08e-08!119;CL:0002334!1.28e-07!12 | |ontology_enrichment_celltype=CL:0000055!1.33e-28!180;CL:0000183!7.31e-23!59;CL:0000680!1.10e-22!57;CL:0000056!1.10e-22!57;CL:0000355!1.10e-22!57;CL:0000187!9.98e-22!54;CL:0000393!6.10e-21!60;CL:0000211!6.10e-21!60;CL:0000192!2.00e-17!42;CL:0000514!2.00e-17!42;CL:0000359!2.84e-13!32;CL:0000057!4.72e-12!75;CL:0000222!1.08e-08!119;CL:0002334!1.28e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000359;6.39e-11;32!CL:0000187;3.79e-10;55!CL:0000393;4.05e-10;61!CL:0000211;4.05e-10;61!CL:0000192;6.51e-10;43!CL:0002334;3.53e-08;12!CL:0002559;4.66e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.42e-20,58;CL:0000056,1.42e-20,58;CL:0000355,1.42e-20,58;CL:0000187,1.08e-19,55;CL:0000393,6.24e-18,61;CL:0000211,6.24e-18,61;CL:0000192,3.12e-15,43;CL:0000514,3.12e-15,43;CL:0000359,1.01e-11,32;CL:0002334,2.13e-08,12;CL:0000222,1.95e-07,121;CL:0002559,2.61e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000355;1.88e-10;58!CL:0000514;6.51e-10;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.67e-28!83;UBERON:0002329!1.67e-28!83;UBERON:0003077!1.67e-28!83;UBERON:0003059!1.67e-28!83;UBERON:0007282!1.67e-28!83;UBERON:0009618!1.67e-28!83;UBERON:0007285!1.67e-28!83;UBERON:0004290!9.08e-28!70;UBERON:0002385!2.30e-26!63;UBERON:0001015!2.30e-26!63;UBERON:0000383!2.30e-26!63;UBERON:0001134!1.57e-25!61;UBERON:0002036!1.57e-25!61;UBERON:0003082!1.57e-25!61;UBERON:0000486!1.74e-23!82;UBERON:0005256!1.37e-16!143;UBERON:0002100!4.68e-14!216;UBERON:0003104!6.93e-14!238;UBERON:0009142!6.93e-14!238;UBERON:0000481!1.91e-11!347;UBERON:0001637!2.40e-10!42;UBERON:0003509!2.40e-10!42;UBERON:0004572!2.40e-10!42;UBERON:0000475!1.36e-09!365;UBERON:0004573!1.74e-09!33;UBERON:0004571!1.74e-09!33;UBERON:0004872!3.60e-09!84;UBERON:0000468!1.49e-08!659;UBERON:0000926!3.89e-08!448;UBERON:0004120!3.89e-08!448;UBERON:0006603!3.89e-08!448;UBERON:0000490!8.84e-08!138;UBERON:0001981!1.52e-07!60;UBERON:0007500!1.52e-07!60;UBERON:0004537!1.52e-07!60;UBERON:0006965!1.52e-07!60;UBERON:0007100!1.54e-07!27;UBERON:0003102!2.26e-07!95 | |ontology_enrichment_uberon=UBERON:0000914!1.67e-28!83;UBERON:0002329!1.67e-28!83;UBERON:0003077!1.67e-28!83;UBERON:0003059!1.67e-28!83;UBERON:0007282!1.67e-28!83;UBERON:0009618!1.67e-28!83;UBERON:0007285!1.67e-28!83;UBERON:0004290!9.08e-28!70;UBERON:0002385!2.30e-26!63;UBERON:0001015!2.30e-26!63;UBERON:0000383!2.30e-26!63;UBERON:0001134!1.57e-25!61;UBERON:0002036!1.57e-25!61;UBERON:0003082!1.57e-25!61;UBERON:0000486!1.74e-23!82;UBERON:0005256!1.37e-16!143;UBERON:0002100!4.68e-14!216;UBERON:0003104!6.93e-14!238;UBERON:0009142!6.93e-14!238;UBERON:0000481!1.91e-11!347;UBERON:0001637!2.40e-10!42;UBERON:0003509!2.40e-10!42;UBERON:0004572!2.40e-10!42;UBERON:0000475!1.36e-09!365;UBERON:0004573!1.74e-09!33;UBERON:0004571!1.74e-09!33;UBERON:0004872!3.60e-09!84;UBERON:0000468!1.49e-08!659;UBERON:0000926!3.89e-08!448;UBERON:0004120!3.89e-08!448;UBERON:0006603!3.89e-08!448;UBERON:0000490!8.84e-08!138;UBERON:0001981!1.52e-07!60;UBERON:0007500!1.52e-07!60;UBERON:0004537!1.52e-07!60;UBERON:0006965!1.52e-07!60;UBERON:0007100!1.54e-07!27;UBERON:0003102!2.26e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;6.73e-13;31!UBERON:0001015;6.73e-13;31!UBERON:0000383;6.73e-13;31!UBERON:0001134;4.57e-10;16!UBERON:0002036;4.57e-10;16!UBERON:0002073;4.66e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002385,1.86e-25,64;UBERON:0001015,1.86e-25,64;UBERON:0000383,1.86e-25,64;UBERON:0001134,6.24e-25,62;UBERON:0002036,6.24e-25,62;UBERON:0003082,6.24e-25,62;UBERON:0007524,1.15e-24,73;UBERON:0002329,2.70e-24,71;UBERON:0003059,2.70e-24,71;UBERON:0007282,2.70e-24,71;UBERON:0004290,2.70e-24,71;UBERON:0009618,2.70e-24,71;UBERON:0003077,9.10e-24,72;UBERON:0007285,9.10e-24,72;UBERON:0007503,6.77e-21,78;UBERON:0000486,6.76e-20,83;UBERON:0005256,6.06e-16,122;UBERON:0003104,7.14e-15,160;UBERON:0009142,7.14e-15,160;UBERON:0002100,1.89e-11,199;UBERON:0000490,1.73e-09,148;UBERON:0002204,2.64e-09,167;UBERON:0000926,1.55e-08,315;UBERON:0004120,1.55e-08,315;UBERON:0006603,1.55e-08,315;UBERON:0001637,6.44e-08,42;UBERON:0003509,6.44e-08,42;UBERON:0004572,6.44e-08,42;UBERON:0002073,2.61e-07,5;UBERON:0005086,2.61e-07,5;UBERON:0004872,5.53e-07,83;UBERON:0004573,9.87e-07,33;UBERON:0004571,9.87e-07,33 | |||
|phase1_expression=1.09007027562334,4.28201047781966,1.26858963686374,10.007329835313,8.04529969969118,4.36169262050184,2.53299878168311,0.631719873426831,0,0,0.697801167972428,0,0,0.495065411840187,2.98257638155124,2.6893005858071,4.21886169616784,3.65155045193687,2.92759679274304,0.369363174230364,0.612002073732759,0.313454721478088,0.286235987131057,0.547497700291537,0.753255837568817,0,0,0,0,0,0,0,0.6024118375565,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0.144824403882799,2.43806866313962,2.01210257911091,0.767175371061182,0.722878304769133,2.00535164254356,0.579386075843295,0,0,0.0945348171640679,1.33037638477538,0.43917392846563,0.0654895377488563,0.364295288292542,0,0,0,0,0.238490624305342,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,2.43042584364528,0.0892997282840798,0,0,0,0,0,0,0,0.872188104285069,6.95760732373446,0.886413581652058,0.794455084879313,0.286836620748814,0.354668382198357,1.12135520028461,2.1349799145941,3.94668077467456,0,1.21239604862719,0.326923806226917,0.302714855289863,0,0,0.936480230490962,0,0.597794722207204,0.587172493218824,0.809364721840658,0.421352420106746,0.204154171254893,1.47401180774122,0.206651562351531,1.18800285728205,3.4617370098998,0,0,0.505008341862199,0.125118519871964,0,0.438977620880838,4.90380473278431,1.65261864797256,0.794025282120147,0.358779271377724,0.640672166455702,1.48352330811693,0.300091096084402,0.309157587715317,1.54584324027377,1.11670113798954,0.675105328965065,0.584622030967192,1.26216887122057,0.552299391853796,0.323292113637624,0.355009592516614,0.906768884048762,0.169560592310488,0.386521706326594,0,0,0.243947412259191,0.132529768321485,0.232387885739037,0.207322110030741,0.252320850875628,0,1.56449532329816,8.36213219650751,1.38134921352481,1.85747171212792,5.0531563716871,0.354920400119532,0.337169380156203,0.723033089650446,0.661763836394364,0.435758888184812,0.71181185733329,0.808987848960987,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,1.03993478527958,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0.425325291727159,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.1466765716419,1.42198887333556,0,2.535908257668,1.86156681609409,1.04007436911366,0.257207374262142,0,1.0656887160644,0.428933980974443,0.542621605391443,0.823240336780769,0.325736184293735,0,0,0.602878754119172,0,1.29964888536674,0,0,0,0.718874566474748,2.29723871668228,0,1.15825045334063,1.2328579353023,0.358121926479791,0,0,0.215627574859517,0,0,0,1.54657762555539,0,0.637938751653163,0,0,0,0.12269149171914,1.00034104211935,2.44138521329762,13.1021642764408,6.60187258549499,5.51958452618771,6.44277782459923,0.601892199455438,0,1.03473071292505,0,0.368738337083406,0.173767228936166,0.195801157462741,2.74514739048685,0,0.431428401637234,0,0,0,0.30239029332968,1.73675465473144,1.68808170616869,5.3325417942284,0.896974044789907,0.511707249066704,3.05622450172854,7.42090332224955,2.15893571323718,1.59805552781814,0.657017248110473,1.55776328755086,3.1376802184189,0,0.601519410909855,0,1.49258782613989,2.54927635209404,1.31124414959424,0,0,0,0,0.211103257785751,0,0.340187410553031,0,0,0.812839312631559,0.501689773854853,0,0,0,0,0,0.769350375349168,0,0.325378394664303,0,0.27470839445503,0,0,0,1.6068392984416,1.25671933779759,2.15668063960502,1.38153307253517,0.827019434907183,0.644521469209642,1.45016693914229,1.19317278382541,2.8490251406956,0.165284915360978,0.192190067365106,0.127612712494584,0,0.929691098594572,0.31481234683064,1.3940745403212,0.616067160352178,0,0.869932992075073,0.55597265731176,1.71749864090389,0.744316738719335,0,1.90630193923825,0.255897791311334,0,0.318203247925937,2.35484592059769,1.07923474549989,1.64722217841633,0.589062011728432,0.606547444719948,11.0957224821106,5.47635993110675,0.975267478179181,1.94970791705028,3.16950440270266,1.09199929126389,2.68670320712054,1.13008116620243,0.551365343546124,3.98063385144732,3.5076070820301,4.05142873986681,1.9676842561399,3.04365565444056,2.16876448669825,4.7888252430481,0.573645408816206,1.27723753317057,0.7133421029625,1.41904425628239,1.26664581178598,0.329294892959902,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0.245040215981032,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.852408440419239,0.23874448473769,0.296964680832639,0,0,0,0.111308705022906,0,0,4.38345574152353,0,0,0,0,2.17727711363265,0,0,0,1.7755813014648,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0.472775363535873,0,0,0.173624994933292,0,0,0,0,0,0.219385397153973,0.10893846351899,0,0.461701551022782,0,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98104772431402,0.265372693510018,4.888241159469,0,0,0,0,11.236087062183,0,0,0.19566461893209,0,1.18375320854817,2.41981432097328,0,0,0,0,0,0.661983911750998,0,0,0,0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| ||
|short_description=p@chr9:35685418..35685431,+ | |short_description=p@chr9:35685418..35685431,+ | ||
}} | }} |
Latest revision as of 01:47, 1 August 2015
Short description: | p@chr9:35685418..35685431, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:35685418..35685431, + |
Coexpression cluster: | C638_skeletal_tongue_Adipocyte_diaphragm_penis_throat_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.42e-20 | 58 |
myoblast | 1.42e-20 | 58 |
multi-potent skeletal muscle stem cell | 1.42e-20 | 58 |
muscle cell | 1.08e-19 | 55 |
electrically responsive cell | 6.24e-18 | 61 |
electrically active cell | 6.24e-18 | 61 |
smooth muscle cell | 3.12e-15 | 43 |
smooth muscle myoblast | 3.12e-15 | 43 |
vascular associated smooth muscle cell | 1.01e-11 | 32 |
preadipocyte | 2.13e-08 | 12 |
mesodermal cell | 1.95e-07 | 121 |
hair follicle cell | 2.61e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
muscle tissue | 1.86e-25 | 64 |
musculature | 1.86e-25 | 64 |
musculature of body | 1.86e-25 | 64 |
skeletal muscle tissue | 6.24e-25 | 62 |
striated muscle tissue | 6.24e-25 | 62 |
myotome | 6.24e-25 | 62 |
dense mesenchyme tissue | 1.15e-24 | 73 |
somite | 2.70e-24 | 71 |
presomitic mesoderm | 2.70e-24 | 71 |
presumptive segmental plate | 2.70e-24 | 71 |
dermomyotome | 2.70e-24 | 71 |
trunk paraxial mesoderm | 2.70e-24 | 71 |
paraxial mesoderm | 9.10e-24 | 72 |
presumptive paraxial mesoderm | 9.10e-24 | 72 |
epithelial vesicle | 6.77e-21 | 78 |
multilaminar epithelium | 6.76e-20 | 83 |
trunk mesenchyme | 6.06e-16 | 122 |
mesenchyme | 7.14e-15 | 160 |
entire embryonic mesenchyme | 7.14e-15 | 160 |
trunk | 1.89e-11 | 199 |
unilaminar epithelium | 1.73e-09 | 148 |
musculoskeletal system | 2.64e-09 | 167 |
mesoderm | 1.55e-08 | 315 |
mesoderm-derived structure | 1.55e-08 | 315 |
presumptive mesoderm | 1.55e-08 | 315 |
artery | 6.44e-08 | 42 |
arterial blood vessel | 6.44e-08 | 42 |
arterial system | 6.44e-08 | 42 |
hair follicle | 2.61e-07 | 5 |
hair follicle placode | 2.61e-07 | 5 |
splanchnic layer of lateral plate mesoderm | 5.53e-07 | 83 |
systemic artery | 9.87e-07 | 33 |
systemic arterial system | 9.87e-07 | 33 |