FFCP PHASE1:Hg19::chr9:35685133..35685147,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:35685133..35685147,- | |||
|coexpression_cluster_id=C493 | |coexpression_cluster_id=C493 | ||
|description=CAGE_peak_at_chr9:35685133..35685147,- | |description=CAGE_peak_at_chr9:35685133..35685147,- | ||
|id=chr9:35685133..35685147,- | |id=chr9:35685133..35685147,- | ||
|ontology_enrichment_celltype=CL:0000055!4.26e-23!180;CL:0000057!5.18e-19!75;CL:0000680!1.05e-12!57;CL:0000056!1.05e-12!57;CL:0000355!1.05e-12!57;CL:0000187!3.58e-12!54;CL:0000192!5.39e-11!42;CL:0000514!5.39e-11!42;CL:0000183!5.65e-11!59;CL:0000393!2.81e-10!60;CL:0000211!2.81e-10!60;CL:0000359!2.69e-08!32;CL:0002334!2.82e-07!12 | |ontology_enrichment_celltype=CL:0000055!4.26e-23!180;CL:0000057!5.18e-19!75;CL:0000680!1.05e-12!57;CL:0000056!1.05e-12!57;CL:0000355!1.05e-12!57;CL:0000187!3.58e-12!54;CL:0000192!5.39e-11!42;CL:0000514!5.39e-11!42;CL:0000183!5.65e-11!59;CL:0000393!2.81e-10!60;CL:0000211!2.81e-10!60;CL:0000359!2.69e-08!32;CL:0002334!2.82e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002559;9.58e-09;5!CL:0002334;2.33e-07;12!CL:0000359;4.92e-07;32!CL:0002561;9.48e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002559,6.57e-09,5;CL:0000359,1.64e-07,32;CL:0000680,2.57e-07,58;CL:0000056,2.57e-07,58;CL:0000355,2.57e-07,58;CL:0002334,3.72e-07,12;CL:0000192,4.14e-07,43;CL:0000514,4.14e-07,43;CL:0000187,8.95e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;4.38e-09;3!DOID:127;4.38e-09;3!DOID:0060072;6.90e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.73e-09,3;DOID:127,2.73e-09,3;DOID:0060072,4.87e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000914!9.55e-15!83;UBERON:0002329!9.55e-15!83;UBERON:0003077!9.55e-15!83;UBERON:0003059!9.55e-15!83;UBERON:0007282!9.55e-15!83;UBERON:0009618!9.55e-15!83;UBERON:0007285!9.55e-15!83;UBERON:0004290!1.24e-12!70;UBERON:0002385!6.57e-12!63;UBERON:0001015!6.57e-12!63;UBERON:0000383!6.57e-12!63;UBERON:0001134!5.42e-11!61;UBERON:0002036!5.42e-11!61;UBERON:0003082!5.42e-11!61;UBERON:0000486!5.19e-10!82;UBERON:0005256!1.50e-09!143;UBERON:0003102!1.81e-09!95;UBERON:0001637!2.04e-07!42;UBERON:0003509!2.04e-07!42;UBERON:0004572!2.04e-07!42;UBERON:0002100!2.13e-07!216;UBERON:0003104!8.10e-07!238;UBERON:0009142!8.10e-07!238 | |ontology_enrichment_uberon=UBERON:0000914!9.55e-15!83;UBERON:0002329!9.55e-15!83;UBERON:0003077!9.55e-15!83;UBERON:0003059!9.55e-15!83;UBERON:0007282!9.55e-15!83;UBERON:0009618!9.55e-15!83;UBERON:0007285!9.55e-15!83;UBERON:0004290!1.24e-12!70;UBERON:0002385!6.57e-12!63;UBERON:0001015!6.57e-12!63;UBERON:0000383!6.57e-12!63;UBERON:0001134!5.42e-11!61;UBERON:0002036!5.42e-11!61;UBERON:0003082!5.42e-11!61;UBERON:0000486!5.19e-10!82;UBERON:0005256!1.50e-09!143;UBERON:0003102!1.81e-09!95;UBERON:0001637!2.04e-07!42;UBERON:0003509!2.04e-07!42;UBERON:0004572!2.04e-07!42;UBERON:0002100!2.13e-07!216;UBERON:0003104!8.10e-07!238;UBERON:0009142!8.10e-07!238 | ||
|ontology_enrichment_uberon_v019=UBERON:0002073;9.58e-09;5!UBERON:0005406;7.70e-07;2!UBERON:0005933;9.48e-07;2!UBERON:0005942;9.48e-07;2!UBERON:0005932;9.48e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002073,6.57e-09,5;UBERON:0005086,6.57e-09,5;UBERON:0007524,1.00e-07,73;UBERON:0002385,2.43e-07,64;UBERON:0001015,2.43e-07,64;UBERON:0000383,2.43e-07,64;UBERON:0002329,4.20e-07,71;UBERON:0003059,4.20e-07,71;UBERON:0007282,4.20e-07,71;UBERON:0004290,4.20e-07,71;UBERON:0009618,4.20e-07,71;UBERON:0003077,6.00e-07,72;UBERON:0007285,6.00e-07,72;UBERON:0005406,6.31e-07,2 | |||
|phase1_expression=0.908391896352783,2.35510576280081,0.563817616383885,8.00586386825043,8.04529969969118,6.97870819280295,2.53299878168311,0,0.261185628199839,0,0,0,0,0.123766352960047,0,2.6893005858071,0.602694528023977,1.46062018077475,2.43966399395253,0,1.02000345622126,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0.50133791063589,1.30361867064741,0,0.486634870302636,0,0.443458794925128,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,2.98183171017191,0.633152558322899,0.264818361626438,0.286836620748814,0.709336764396714,0,1.06748995729705,2.22000793575444,0,0,0.817309515567294,0.151357427644931,0.576175924479999,0,0.624320153660641,0,0.747243402759005,0.469737994575059,0,0.421352420106746,0.408308342509787,1.10550885580591,0.206651562351531,0,1.7308685049499,0.910161361938026,1.43723628363248,0.336672227908132,0.625592599359821,0.277064115484183,0.438977620880838,4.90380473278431,0.751190294532984,0.340296549480063,0.717558542755448,0.213557388818567,0.847727604638247,0.600182192168805,0.412210116953756,0,0.18611685633159,0.337552664482532,0.584622030967192,0.252433774244115,0.0920498986422993,0.80823028409406,1.42003837006646,1.5112814734146,0.67824236924195,0,0,0,0,0,0,0,0,0,0,1.92972281457866,1.38134921352481,3.25057549622385,2.16563844500876,0.473227200159376,0.168584690078102,0.241011029883482,0.441175890929576,0.217879444092406,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0.8231480226628,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0.129271715757778,0,0,0.531876233169741,0,0.257207374262142,0,0.266422179016099,0.285955987316295,0,0,0,0,0.791951872933429,0,0.871533458600294,0.599837947092342,0,0,0,0.479249710983165,0,0,0.289562613335158,2.26023954805422,0,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,1.50051156317903,1.62759014219841,1.45579603071565,4.81758269752337,2.05013139544115,0.819989904948992,0.300946099727719,0,0,0,1.10621501125022,0.60818530127658,0,1.02943027143257,0,0,0,0,0,0,0,0.61384789315225,2.80660094433074,0.128139149255701,0.511707249066704,1.12597744800525,2.96836132889982,1.07946785661859,1.06537035187876,0.410635780069046,0.519254429183621,3.1376802184189,0,0.200506470303285,0.184161977871793,0.229628896329213,2.00300284807389,1.70461739447251,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0,0.183138929636687,0,0,0,0,0,0.462145851343933,1.38153307253517,0.137836572484531,0.429680979473094,1.0151168573996,0.0852266274161009,0,0,0,0.127612712494584,0,0,0.94443704049192,0,0,1.06461206063404,0,0.37064843820784,2.14687330112987,0,0,1.14378116354295,0,0.42793898803392,0,0.78494864019923,0.359744915166629,0.54907405947211,0.471249609382746,0.606547444719948,3.17020642346017,0,0,0.487426979262569,0,0.409499734223957,0.989838023675989,0,0.551365343546124,0.66343897524122,1.31535265576129,1.15755106853338,1.31178950409327,0.608731130888112,1.54911749049875,2.81695602532241,0.286822704408103,0.294747123039363,1.426684205925,0.354761064070598,0.633322905892992,0.658589785919804,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39097585901284,0,0,0,0,1.86623752597084,0,0,0,0.887790650732402,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0.10893846351899,0,0.230850775511391,0,0.23056390438806,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.796118080530053,2.4441205797345,0,0,0,0.067401132980677,0,0,0,0,0.242780379534093,0.789168805698781,1.20990716048664,0,0.063186579628488,0,0,0,1.323967823502,0,0,0,0.277349346026277,0,0,0.0870592065804026,0.698906672968121,0.171986032471617,0.290268993867255,0.219267951258557,0.328461828212837,1.26085721434945,0,0.451961481561065,0,0,0,0,0.0801588202515337,1.92107695265417,0.19980960958213,0,0,0,0,0.124252535565433,0.235694034616795,0,0,0.203996435272644,0,0,0.136905378891993,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0.0671834724867263,1.80149941771202,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0.105600336519406,0,0.191915197319445,1.42939065274673,0,0,4.88699641578341,1.72844298240254,5.22539776175055,0,0,0.170388021785422,0.226624183040251,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0.235265819698172,0,0,1.49254802886874,0.467426619694449,0.554805861502613,0.947015026375446,0.50313580350515,1.77962244319307,0,0.756154618816195,1.08806040407946,0.295710299979268,0.477890301491107,0,0.621051827505038,0.414706207840855,0.531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| ||
|short_description=p@chr9:35685133..35685147,- | |short_description=p@chr9:35685133..35685147,- | ||
}} | }} |
Latest revision as of 01:47, 1 August 2015
Short description: | p@chr9:35685133..35685147, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:35685133..35685147, - |
Coexpression cluster: | C493_Adipocyte_basal_Mesenchymal_Smooth_mesenchymal_Aortic_Multipotent |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle cell | 6.57e-09 | 5 |
vascular associated smooth muscle cell | 1.64e-07 | 32 |
muscle precursor cell | 2.57e-07 | 58 |
myoblast | 2.57e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.57e-07 | 58 |
preadipocyte | 3.72e-07 | 12 |
smooth muscle cell | 4.14e-07 | 43 |
smooth muscle myoblast | 4.14e-07 | 43 |
muscle cell | 8.95e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
hair follicle | 6.57e-09 | 5 |
hair follicle placode | 6.57e-09 | 5 |
dense mesenchyme tissue | 1.00e-07 | 73 |
muscle tissue | 2.43e-07 | 64 |
musculature | 2.43e-07 | 64 |
musculature of body | 2.43e-07 | 64 |
somite | 4.20e-07 | 71 |
presomitic mesoderm | 4.20e-07 | 71 |
presumptive segmental plate | 4.20e-07 | 71 |
dermomyotome | 4.20e-07 | 71 |
trunk paraxial mesoderm | 4.20e-07 | 71 |
paraxial mesoderm | 6.00e-07 | 72 |
presumptive paraxial mesoderm | 6.00e-07 | 72 |
perirenal fat | 6.31e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.73e-09 | 3 |
leiomyoma | 2.73e-09 | 3 |
benign neoplasm | 4.87e-07 | 4 |