FFCP PHASE1:Hg19::chr9:35684475..35684520,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:35684475..35684520,+ | |||
|coexpression_cluster_id=C638 | |coexpression_cluster_id=C638 | ||
|description=CAGE_peak_at_chr9:35684475..35684520,+ | |description=CAGE_peak_at_chr9:35684475..35684520,+ | ||
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|ontology_enrichment_celltype=CL:0000055!1.21e-34!180;CL:0000680!3.18e-24!57;CL:0000056!3.18e-24!57;CL:0000355!3.18e-24!57;CL:0000393!5.65e-24!60;CL:0000211!5.65e-24!60;CL:0000183!3.89e-23!59;CL:0000187!5.27e-23!54;CL:0000192!2.47e-18!42;CL:0000514!2.47e-18!42;CL:0000359!6.42e-15!32;CL:0000222!8.30e-15!119;CL:0000057!8.31e-13!75;CL:0002321!2.66e-11!248;CL:0000220!2.70e-11!246 | |ontology_enrichment_celltype=CL:0000055!1.21e-34!180;CL:0000680!3.18e-24!57;CL:0000056!3.18e-24!57;CL:0000355!3.18e-24!57;CL:0000393!5.65e-24!60;CL:0000211!5.65e-24!60;CL:0000183!3.89e-23!59;CL:0000187!5.27e-23!54;CL:0000192!2.47e-18!42;CL:0000514!2.47e-18!42;CL:0000359!6.42e-15!32;CL:0000222!8.30e-15!119;CL:0000057!8.31e-13!75;CL:0002321!2.66e-11!248;CL:0000220!2.70e-11!246 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.94e-16;32!CL:0000192;3.91e-15;43!CL:0000187;7.47e-15;55!CL:0000393;1.14e-13;61!CL:0000211;1.14e-13;61!CL:0002539;9.60e-07;10 | |ontology_enrichment_celltype_v019=CL:0000359;2.94e-16;32!CL:0000192;3.91e-15;43!CL:0000187;7.47e-15;55!CL:0000393;1.14e-13;61!CL:0000211;1.14e-13;61!CL:0002539;9.60e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000680,7.71e-29,58;CL:0000056,7.71e-29,58;CL:0000355,7.71e-29,58;CL:0000393,6.11e-28,61;CL:0000211,6.11e-28,61;CL:0000187,2.16e-27,55;CL:0000192,7.54e-22,43;CL:0000514,7.54e-22,43;CL:0000359,2.35e-17,32;CL:0000222,1.62e-15,121;CL:0000057,5.81e-14,76;CL:0002321,4.50e-08,250;CL:0000048,1.77e-07,427;CL:0002539,8.25e-07,10;CL:0000723,9.65e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000514;3.91e-15;43!CL:0000355;1.09e-14;58 | |ontology_enrichment_development_v019=CL:0000514;3.91e-15;43!CL:0000355;1.09e-14;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p@chr9:35684475..35684520,+ | |short_description=p@chr9:35684475..35684520,+ | ||
}} | }} |
Latest revision as of 01:47, 1 August 2015
Short description: | p@chr9:35684475..35684520, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:35684475..35684520, + |
Coexpression cluster: | C638_skeletal_tongue_Adipocyte_diaphragm_penis_throat_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 7.71e-29 | 58 |
myoblast | 7.71e-29 | 58 |
multi-potent skeletal muscle stem cell | 7.71e-29 | 58 |
electrically responsive cell | 6.11e-28 | 61 |
electrically active cell | 6.11e-28 | 61 |
muscle cell | 2.16e-27 | 55 |
smooth muscle cell | 7.54e-22 | 43 |
smooth muscle myoblast | 7.54e-22 | 43 |
vascular associated smooth muscle cell | 2.35e-17 | 32 |
mesodermal cell | 1.62e-15 | 121 |
fibroblast | 5.81e-14 | 76 |
embryonic cell | 4.50e-08 | 250 |
multi fate stem cell | 1.77e-07 | 427 |
aortic smooth muscle cell | 8.25e-07 | 10 |
somatic stem cell | 9.65e-07 | 433 |