FFCP PHASE1:Hg19::chr9:23688985..23688989,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:23688985..23688989,- | |||
|coexpression_cluster_id=C4815 | |||
|description=CAGE_peak_at_chr9:23688985..23688989,- | |||
|id=chr9:23688985..23688989,- | |||
|ontology_enrichment_celltype=CL:0000540!1.60e-11!6;CL:0000031!1.60e-11!6;CL:0000404!1.60e-11!6;CL:0000047!4.84e-11!8;CL:0002319!1.83e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000123;8.95e-24;2!CL:0000242;8.95e-24;2!CL:0000540;4.24e-17;6!CL:0000404;4.24e-17;6!CL:0002319;1.77e-14;25!CL:0000312;4.34e-10;5!CL:0000333;9.27e-10;5!CL:0000240;1.50e-08;6!CL:0000311;1.50e-08;6!CL:0000079;1.50e-08;6!CL:0000237;1.50e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,8.02e-24,2;CL:0000540,2.66e-17,6;CL:0000031,2.66e-17,6;CL:0000404,2.66e-17,6;CL:0002319,1.21e-14,25;CL:0000047,3.94e-13,8;CL:0000133,8.27e-11,59;CL:0000312,4.16e-10,5;CL:0000221,9.47e-09,72;CL:0000240,1.44e-08,6;CL:0000311,1.44e-08,6;CL:0000079,1.44e-08,6;CL:0000237,1.44e-08,6;CL:0000036,1.44e-08,6;CL:0000357,1.44e-08,6;CL:0000114,1.44e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000031;4.24e-17;6!CL:0000357;1.50e-08;6!CL:0000114;1.50e-08;6!CL:0000133;8.94e-07;59 | |||
|ontology_enrichment_disease=DOID:305!2.60e-09!106;DOID:0050687!6.78e-09!143;DOID:1749!3.53e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:169;2.81e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,3.50e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.96e-27!94;UBERON:0001016!1.96e-27!94;UBERON:0001017!5.34e-27!82;UBERON:0005743!1.19e-26!86;UBERON:0000955!7.50e-22!69;UBERON:0006238!7.50e-22!69;UBERON:0002020!7.77e-22!34;UBERON:0003528!7.77e-22!34;UBERON:0001869!1.30e-21!32;UBERON:0000924!5.46e-21!173;UBERON:0006601!5.46e-21!173;UBERON:0004121!5.65e-21!169;UBERON:0001049!6.78e-21!57;UBERON:0005068!6.78e-21!57;UBERON:0006241!6.78e-21!57;UBERON:0007135!6.78e-21!57;UBERON:0002619!1.07e-20!22;UBERON:0001950!2.12e-20!20;UBERON:0001893!5.68e-20!34;UBERON:0002616!7.10e-20!59;UBERON:0002791!1.18e-18!33;UBERON:0000033!3.44e-18!123;UBERON:0000956!1.13e-17!25;UBERON:0000203!1.13e-17!25;UBERON:0002780!4.98e-17!41;UBERON:0001890!4.98e-17!41;UBERON:0006240!4.98e-17!41;UBERON:0000153!1.00e-16!129;UBERON:0007811!1.00e-16!129;UBERON:0003080!1.82e-16!42;UBERON:0003075!1.34e-15!86;UBERON:0007284!1.34e-15!86;UBERON:0002346!1.93e-15!90;UBERON:0003056!2.03e-13!61;UBERON:0000200!1.83e-10!6;UBERON:0000064!7.14e-10!219;UBERON:0001872!7.09e-09!5;UBERON:0000473!1.22e-07!8;UBERON:0004733!1.63e-07!12;UBERON:0002028!1.63e-07!12;UBERON:0007277!1.63e-07!12;UBERON:0007023!2.00e-07!115;UBERON:0003343!3.44e-07!4;UBERON:0004785!3.44e-07!4;UBERON:0003135!5.90e-07!11;UBERON:0004732!8.02e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0003112;2.32e-12;1!UBERON:0011158;2.32e-12;1!UBERON:0003128;2.32e-12;1!UBERON:0001703;2.32e-12;1!UBERON:0002241;2.32e-12;1!UBERON:0002021;6.36e-10;5!UBERON:0001872;9.27e-10;5!UBERON:0000013;9.27e-10;5!UBERON:0002410;9.27e-10;5!UBERON:0001950;1.06e-08;20!UBERON:0002619;5.85e-08;22!UBERON:0000956;4.65e-07;25!UBERON:0000203;4.65e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.28e-13,89;UBERON:0003112,3.85e-12,1;UBERON:0011158,3.85e-12,1;UBERON:0003128,3.85e-12,1;UBERON:0001703,3.85e-12,1;UBERON:0002241,3.85e-12,1;UBERON:0004761,3.85e-12,1;UBERON:0009617,3.85e-12,1;UBERON:0002021,7.11e-10,5;UBERON:0001017,1.06e-09,81;UBERON:0001872,1.06e-09,5;UBERON:0000013,1.21e-09,5;UBERON:0002410,1.21e-09,5;UBERON:0004121,6.31e-09,171;UBERON:0000924,6.31e-09,171;UBERON:0006601,6.31e-09,171;UBERON:0001950,1.19e-08,20;UBERON:0002619,6.48e-08,22;UBERON:0000956,5.08e-07,25;UBERON:0000203,5.08e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0.243947412259191,0.132529768321485,0.116193942869518,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0.335032530668698,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614481528616916,0,0.166849141711909,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0.755798243562828,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0.174919999992391,0,0.1137934482855,0.254253650292766,0,6.55012409158783,0,0.347249989866585,0,0.120596438625408,1.52581736317083,0.110579259931225,0.591095237907095,0,0,0,0,0.797594390929008,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0.317873157960757,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61214552326098,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0.783532859223623,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0.379864775735272,0,0,0,0,0,0,0.514784993585894,0,0,0.235694034616795,0.135904206073614,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.544813624446302,1.92903778158023,1.78801267576404,0.415440338029185,0,0,0.121499113316049,0,0,0,0,0,0.767660789277781,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.646414781807753,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.244052529803926,0.876336514945499,0,0.110929051536852,0.0620964029413835,1.93688088910723,0,0,0,0,2.34167452903441,2.8984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20008329398946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40683808434017,1.07824811396682,0,0.436838552768056,0,0,0.123935764259002,0,0,0,0.80057074828547,0,0,0.0642292250964595,0,0.957803154342908,1.23069818544453,2.26864526599546,0.138314504928436,1.13032951942296,0,0.490738592505128,0.235939446695481,0.366857197043358,0.231051332300676,0,0,1.79024599904647,0,0,0,0,0,0,0.607838261565552,1.56215619722769,0.413373593002368,0.19024743058172,1.09394961803644,0,0,0,0,0,0,0,0,0,0,0,0.271878931907327,0.131545547125698,0,0.222462803784138,0,0.314231179832004,0,0,0,0,0,0.158013611732727,0,0.173858272302579,0,0,0.3414369541879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16969731731053,0.198950775161368,0,0.79062257427272,0.219881033490858,0.452888530700021,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0.327796715891087,0,0.509944148709909,0.26721740526556,0.459474497674225,0.250707539292375,0.378893491091197,0.803892390468535,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0.732629417498771,0.533636729388577,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr9:23688985..23688989,- | |||
}} |
Latest revision as of 01:12, 1 August 2015
Short description: | p@chr9:23688985..23688989, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:23688985..23688989, - |
Coexpression cluster: | C4815_merkel_large_carcinoid_medulloblastoma_small_osteosarcoma_Neurons |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 8.02e-24 | 2 |
neuron | 2.66e-17 | 6 |
neuroblast | 2.66e-17 | 6 |
electrically signaling cell | 2.66e-17 | 6 |
neural cell | 1.21e-14 | 25 |
neuronal stem cell | 3.94e-13 | 8 |
neurectodermal cell | 8.27e-11 | 59 |
keratinocyte | 4.16e-10 | 5 |
ectodermal cell | 9.47e-09 | 72 |
stratified squamous epithelial cell | 1.44e-08 | 6 |
keratin accumulating cell | 1.44e-08 | 6 |
stratified epithelial cell | 1.44e-08 | 6 |
keratinizing barrier epithelial cell | 1.44e-08 | 6 |
epithelial fate stem cell | 1.44e-08 | 6 |
stratified epithelial stem cell | 1.44e-08 | 6 |
surface ectodermal cell | 1.44e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
nervous system | 5.28e-13 | 89 |
olfactory region | 3.85e-12 | 1 |
primary subdivision of skull | 3.85e-12 | 1 |
cranium | 3.85e-12 | 1 |
neurocranium | 3.85e-12 | 1 |
chondrocranium | 3.85e-12 | 1 |
cartilaginous neurocranium | 3.85e-12 | 1 |
head paraxial mesoderm | 3.85e-12 | 1 |
occipital lobe | 7.11e-10 | 5 |
central nervous system | 1.06e-09 | 81 |
parietal lobe | 1.06e-09 | 5 |
sympathetic nervous system | 1.21e-09 | 5 |
autonomic nervous system | 1.21e-09 | 5 |
ectoderm-derived structure | 6.31e-09 | 171 |
ectoderm | 6.31e-09 | 171 |
presumptive ectoderm | 6.31e-09 | 171 |
neocortex | 1.19e-08 | 20 |
regional part of cerebral cortex | 6.48e-08 | 22 |
cerebral cortex | 5.08e-07 | 25 |
pallium | 5.08e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 3.50e-08 | 6 |