FFCP PHASE1:Hg19::chr9:22217093..22217104,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:22217093..22217104,+ | |||
|coexpression_cluster_id=C264 | |||
|description=CAGE_peak_at_chr9:22217093..22217104,+ | |description=CAGE_peak_at_chr9:22217093..22217104,+ | ||
|id=chr9:22217093..22217104,+ | |id=chr9:22217093..22217104,+ | ||
|ontology_enrichment_celltype=CL:1000415!5.48e-11!2 | |ontology_enrichment_celltype=CL:1000415!5.48e-11!2 | ||
|ontology_enrichment_celltype_v019=CL:0000322;2.59e-12;3!CL:0000243;9.25e-09;15!CL:0000125;9.25e-09;15!CL:0000095;6.15e-08;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,3.24e-12,3;CL:0000243,8.23e-09,15;CL:0000125,8.23e-09,15;CL:0000030,8.23e-09,15;CL:0000339,8.23e-09,15;CL:0000095,5.54e-08,17;CL:0000123,5.54e-08,17 | |||
|ontology_enrichment_development_v019=UBERON:0006238;5.42e-13;10!CL:0000339;9.25e-09;15 | |||
|ontology_enrichment_disease=DOID:1909!7.01e-11!2;DOID:162!6.84e-10!235;DOID:14566!1.47e-09!239;DOID:0050687!6.11e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:154;9.07e-18;2!DOID:4236;9.07e-18;2!DOID:1909;9.07e-18;2!DOID:3910;9.07e-18;2!DOID:3093;5.37e-12;11!DOID:3908;6.55e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,9.07e-18,2;DOID:154,1.07e-17,2;DOID:4236,1.07e-17,2;DOID:3910,1.27e-17,2;DOID:3093,4.54e-12,11;DOID:3908,7.49e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0002110!1.35e-07!3;UBERON:0006242!1.35e-07!3;UBERON:0002294!9.41e-07!7;UBERON:0001173!9.41e-07!7;UBERON:0004912!9.41e-07!7 | |ontology_enrichment_uberon=UBERON:0002110!1.35e-07!3;UBERON:0006242!1.35e-07!3;UBERON:0002294!9.41e-07!7;UBERON:0001173!9.41e-07!7;UBERON:0004912!9.41e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;9.07e-18;2!UBERON:0002173;9.07e-18;2!UBERON:0002186;9.07e-18;2!UBERON:0004821;2.59e-12;3!UBERON:0007499;2.59e-12;3!UBERON:0003215;2.59e-12;3!UBERON:0010368;2.59e-12;3!UBERON:0009911;2.59e-12;3!UBERON:0002299;2.59e-12;3!UBERON:0006524;2.59e-12;3!UBERON:0008874;2.59e-12;3!UBERON:0002169;2.59e-12;3!UBERON:0004894;2.59e-12;3!UBERON:0009856;1.44e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.27e-17,2;UBERON:0002173,1.27e-17,2;UBERON:0002186,1.27e-17,2;UBERON:0004821,3.24e-12,3;UBERON:0003215,3.24e-12,3;UBERON:0010368,3.24e-12,3;UBERON:0009911,3.24e-12,3;UBERON:0002299,3.24e-12,3;UBERON:0006524,3.24e-12,3;UBERON:0008874,3.24e-12,3;UBERON:0002169,3.24e-12,3;UBERON:0004894,3.24e-12,3 | |||
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|short_description=p@chr9:22217093..22217104,+ | |short_description=p@chr9:22217093..22217104,+ | ||
}} | }} |
Latest revision as of 01:11, 1 August 2015
Short description: | p@chr9:22217093..22217104, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:22217093..22217104, + |
Coexpression cluster: | C264_giant_keratoacanthoma_colon_fibrosarcoma_HES3GFP_Hep2_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 3.24e-12 | 3 |
glial cell (sensu Vertebrata) | 8.23e-09 | 15 |
glial cell | 8.23e-09 | 15 |
glioblast | 8.23e-09 | 15 |
glioblast (sensu Vertebrata) | 8.23e-09 | 15 |
neuron associated cell | 5.54e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 5.54e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.27e-17 | 2 |
alveolar duct | 1.27e-17 | 2 |
bronchiole | 1.27e-17 | 2 |
pulmonary alveolus epithelium | 3.24e-12 | 3 |
alveolus | 3.24e-12 | 3 |
pulmonary lobule | 3.24e-12 | 3 |
lobule | 3.24e-12 | 3 |
alveolus of lung | 3.24e-12 | 3 |
alveolar system | 3.24e-12 | 3 |
pulmonary acinus | 3.24e-12 | 3 |
alveolar sac | 3.24e-12 | 3 |
alveolar wall | 3.24e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
melanoma | 9.07e-18 | 2 |
mixed cell type cancer | 1.07e-17 | 2 |
carcinosarcoma | 1.07e-17 | 2 |
lung adenocarcinoma | 1.27e-17 | 2 |
nervous system cancer | 4.54e-12 | 11 |
non-small cell lung carcinoma | 7.49e-08 | 5 |