FFCP PHASE1:Hg19::chr9:15298766..15298791,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:15298766..15298791,+ | |||
|coexpression_cluster_id=C432 | |coexpression_cluster_id=C432 | ||
|description=CAGE_peak_at_chr9:15298766..15298791,+ | |description=CAGE_peak_at_chr9:15298766..15298791,+ | ||
|id=chr9:15298766..15298791,+ | |id=chr9:15298766..15298791,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.83e-41!42;CL:0000860!4.76e-38!45;CL:0000839!4.01e-35!70;CL:0000557!1.43e-34!71;CL:0000766!5.07e-32!76;CL:0002031!4.09e-26!124;CL:0002194!1.33e-25!63;CL:0000576!1.33e-25!63;CL:0000040!1.33e-25!63;CL:0000559!1.33e-25!63;CL:0002009!1.04e-24!65;CL:0000738!1.57e-24!140;CL:0002087!1.35e-20!119;CL:0000763!2.53e-20!112;CL:0000049!2.53e-20!112;CL:0002274!3.35e-19!5;CL:0000457!3.35e-19!5;CL:0002191!3.35e-19!5;CL:0000097!3.35e-19!5;CL:0000831!3.35e-19!5;CL:0002028!3.35e-19!5;CL:0000037!5.61e-19!172;CL:0000566!5.61e-19!172;CL:0002032!2.42e-18!165;CL:0000837!2.42e-18!165;CL:0000988!1.22e-17!182;CL:0000163!9.92e-11!9;CL:0000623!1.88e-08!3;CL:0000825!1.88e-08!3;CL:0000034!4.25e-08!444;CL:0000134!7.99e-08!358;CL:0000048!9.75e-08!430;CL:0002320!1.46e-07!365;CL:0000723!1.52e-07!436;CL:0000047!4.66e-07!8;CL:0000319!7.73e-07!1 | |ontology_enrichment_celltype=CL:0002057!4.83e-41!42;CL:0000860!4.76e-38!45;CL:0000839!4.01e-35!70;CL:0000557!1.43e-34!71;CL:0000766!5.07e-32!76;CL:0002031!4.09e-26!124;CL:0002194!1.33e-25!63;CL:0000576!1.33e-25!63;CL:0000040!1.33e-25!63;CL:0000559!1.33e-25!63;CL:0002009!1.04e-24!65;CL:0000738!1.57e-24!140;CL:0002087!1.35e-20!119;CL:0000763!2.53e-20!112;CL:0000049!2.53e-20!112;CL:0002274!3.35e-19!5;CL:0000457!3.35e-19!5;CL:0002191!3.35e-19!5;CL:0000097!3.35e-19!5;CL:0000831!3.35e-19!5;CL:0002028!3.35e-19!5;CL:0000037!5.61e-19!172;CL:0000566!5.61e-19!172;CL:0002032!2.42e-18!165;CL:0000837!2.42e-18!165;CL:0000988!1.22e-17!182;CL:0000163!9.92e-11!9;CL:0000623!1.88e-08!3;CL:0000825!1.88e-08!3;CL:0000034!4.25e-08!444;CL:0000134!7.99e-08!358;CL:0000048!9.75e-08!430;CL:0002320!1.46e-07!365;CL:0000723!1.52e-07!436;CL:0000047!4.66e-07!8;CL:0000319!7.73e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.16e-37;33!CL:0002057;1.16e-37;33!CL:0000473;5.98e-28;39!CL:0000234;5.98e-28;39!CL:0000766;4.13e-21;69!CL:0000576;1.32e-14;48!CL:0000097;5.01e-14;5!CL:0000763;6.75e-11;100!CL:0000047;1.71e-09;2!CL:0000163;3.30e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.71e-31,42;CL:0002057,2.71e-31,42;CL:0000839,5.53e-29,66;CL:0000557,1.51e-28,67;CL:0000473,2.56e-27,48;CL:0000234,2.56e-27,48;CL:0000766,1.52e-26,72;CL:0002194,9.63e-22,59;CL:0000576,9.63e-22,59;CL:0000040,9.63e-22,59;CL:0000559,9.63e-22,59;CL:0002009,5.06e-21,61;CL:0000763,1.58e-17,108;CL:0000049,1.58e-17,108;CL:0002031,1.04e-15,120;CL:0000097,5.72e-14,5;CL:0002028,5.72e-14,5;CL:0000738,8.94e-14,136;CL:0002032,1.64e-11,161;CL:0000837,1.64e-11,161;CL:0000037,5.38e-11,168;CL:0002087,6.37e-11,115;CL:0000988,2.16e-10,177;CL:0000163,3.55e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;3.42e-25;42 | |||
|ontology_enrichment_disease=DOID:3030!7.73e-07!1 | |ontology_enrichment_disease=DOID:3030!7.73e-07!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.29e-30!80;UBERON:0001474!8.41e-28!86;UBERON:0002390!4.90e-25!102;UBERON:0003061!4.90e-25!102;UBERON:0004765!5.06e-23!101;UBERON:0001434!5.06e-23!101;UBERON:0002193!2.17e-22!112;UBERON:0002405!1.12e-19!115;UBERON:0002204!3.88e-12!167;UBERON:0003081!2.45e-09!216;UBERON:0002384!3.32e-07!375 | |ontology_enrichment_uberon=UBERON:0002371!3.29e-30!80;UBERON:0001474!8.41e-28!86;UBERON:0002390!4.90e-25!102;UBERON:0003061!4.90e-25!102;UBERON:0004765!5.06e-23!101;UBERON:0001434!5.06e-23!101;UBERON:0002193!2.17e-22!112;UBERON:0002405!1.12e-19!115;UBERON:0002204!3.88e-12!167;UBERON:0003081!2.45e-09!216;UBERON:0002384!3.32e-07!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.96e-25,76;UBERON:0001474,2.92e-23,82;UBERON:0004765,3.77e-21,90;UBERON:0002405,1.89e-20,93;UBERON:0002390,2.23e-19,98;UBERON:0003061,2.23e-19,98;UBERON:0001434,5.58e-19,100;UBERON:0002193,1.58e-17,108;UBERON:0002204,4.56e-11,167;UBERON:0003081,6.06e-09,203 | |||
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|short_description=p@chr9:15298766..15298791,+ | |short_description=p@chr9:15298766..15298791,+ | ||
}} | }} |
Latest revision as of 00:51, 1 August 2015
Short description: | p@chr9:15298766..15298791, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:15298766..15298791, + |
Coexpression cluster: | C432_CD14_choriocarcinoma_Peripheral_CD34_Mast_Fibroblast_granulocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.71e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.71e-31 | 42 |
myeloid lineage restricted progenitor cell | 5.53e-29 | 66 |
granulocyte monocyte progenitor cell | 1.51e-28 | 67 |
defensive cell | 2.56e-27 | 48 |
phagocyte | 2.56e-27 | 48 |
myeloid leukocyte | 1.52e-26 | 72 |
monopoietic cell | 9.63e-22 | 59 |
monocyte | 9.63e-22 | 59 |
monoblast | 9.63e-22 | 59 |
promonocyte | 9.63e-22 | 59 |
macrophage dendritic cell progenitor | 5.06e-21 | 61 |
myeloid cell | 1.58e-17 | 108 |
common myeloid progenitor | 1.58e-17 | 108 |
hematopoietic lineage restricted progenitor cell | 1.04e-15 | 120 |
mast cell | 5.72e-14 | 5 |
basophil mast progenitor cell | 5.72e-14 | 5 |
leukocyte | 8.94e-14 | 136 |
hematopoietic oligopotent progenitor cell | 1.64e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.64e-11 | 161 |
hematopoietic stem cell | 5.38e-11 | 168 |
nongranular leukocyte | 6.37e-11 | 115 |
hematopoietic cell | 2.16e-10 | 177 |
endocrine cell | 3.55e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.96e-25 | 76 |
bone element | 2.92e-23 | 82 |
skeletal element | 3.77e-21 | 90 |
immune system | 1.89e-20 | 93 |
hematopoietic system | 2.23e-19 | 98 |
blood island | 2.23e-19 | 98 |
skeletal system | 5.58e-19 | 100 |
hemolymphoid system | 1.58e-17 | 108 |
musculoskeletal system | 4.56e-11 | 167 |
lateral plate mesoderm | 6.06e-09 | 203 |