FFCP PHASE1:Hg19::chr9:140348438..140348460,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:140348438..140348460,- | |||
|coexpression_cluster_id=C127 | |coexpression_cluster_id=C127 | ||
|description=CAGE_peak_at_chr9:140348438..140348460,- | |description=CAGE_peak_at_chr9:140348438..140348460,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002393!4.31e-07!9;CL:0002397!4.31e-07!9 | |ontology_enrichment_celltype=CL:0002393!4.31e-07!9;CL:0002397!4.31e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002032;2.70e-40;1!CL:0000557;2.70e-40;1!CL:0002363;6.30e-21;2!CL:0000322;1.40e-14;3!CL:0000082;2.17e-09;19 | |ontology_enrichment_celltype_v019=CL:0002032;2.70e-40;1!CL:0000557;2.70e-40;1!CL:0002363;6.30e-21;2!CL:0000322;1.40e-14;3!CL:0000082;2.17e-09;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0002363,6.96e-21,2;CL:0000008,6.96e-21,2;CL:0000322,1.40e-14,3;CL:0000082,2.17e-09,19 | |||
|ontology_enrichment_development_v019=CL:0000008;6.30e-21;2 | |ontology_enrichment_development_v019=CL:0000008;6.30e-21;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0050619;6.62e-41;1!DOID:1357;6.62e-41;1!DOID:1325;1.28e-23;7!DOID:3904;1.28e-23;7!DOID:0050615;4.17e-23;16!DOID:3910;3.81e-21;2!DOID:3905;1.24e-18;9!DOID:1324;1.27e-11;15!DOID:5409;3.10e-11;4!DOID:3908;2.74e-09;5 | |ontology_enrichment_disease_v019=DOID:0050619;6.62e-41;1!DOID:1357;6.62e-41;1!DOID:1325;1.28e-23;7!DOID:3904;1.28e-23;7!DOID:0050615;4.17e-23;16!DOID:3910;3.81e-21;2!DOID:3905;1.24e-18;9!DOID:1324;1.27e-11;15!DOID:5409;3.10e-11;4!DOID:3908;2.74e-09;5 | ||
|ontology_enrichment_disease_v019_2=DOID:0050619,6.62e-41,1;DOID:1357,6.62e-41,1;DOID:1325,1.28e-23,7;DOID:3904,1.28e-23,7;DOID:0050615,4.17e-23,16;DOID:3910,3.81e-21,2;DOID:3905,1.24e-18,9;DOID:1324,1.27e-11,15;DOID:5409,3.10e-11,4;DOID:3908,2.74e-09,5 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001764;6.62e-41;1!UBERON:0001825;6.62e-41;1!UBERON:0004903;3.81e-21;2!UBERON:0002173;3.81e-21;2!UBERON:0002186;3.81e-21;2!UBERON:0003566;6.30e-21;2!UBERON:0001777;6.30e-21;2!UBERON:0004821;1.40e-14;3!UBERON:0007499;1.40e-14;3!UBERON:0003215;1.40e-14;3!UBERON:0010368;1.40e-14;3!UBERON:0009911;1.40e-14;3!UBERON:0002299;1.40e-14;3!UBERON:0006524;1.40e-14;3!UBERON:0008874;1.40e-14;3!UBERON:0002169;1.40e-14;3!UBERON:0004894;1.40e-14;3!UBERON:0009856;2.80e-11;4!UBERON:0003891;3.60e-11;4!UBERON:0000964;3.60e-11;4!UBERON:0010409;3.60e-11;4!UBERON:0004802;2.17e-09;19!UBERON:0000115;2.17e-09;19!UBERON:0002048;3.04e-08;22!UBERON:0004807;3.04e-08;22!UBERON:0000117;3.04e-08;22!UBERON:0000171;3.04e-08;22!UBERON:0000170;3.04e-08;22 | |ontology_enrichment_uberon_v019=UBERON:0001764;6.62e-41;1!UBERON:0001825;6.62e-41;1!UBERON:0004903;3.81e-21;2!UBERON:0002173;3.81e-21;2!UBERON:0002186;3.81e-21;2!UBERON:0003566;6.30e-21;2!UBERON:0001777;6.30e-21;2!UBERON:0004821;1.40e-14;3!UBERON:0007499;1.40e-14;3!UBERON:0003215;1.40e-14;3!UBERON:0010368;1.40e-14;3!UBERON:0009911;1.40e-14;3!UBERON:0002299;1.40e-14;3!UBERON:0006524;1.40e-14;3!UBERON:0008874;1.40e-14;3!UBERON:0002169;1.40e-14;3!UBERON:0004894;1.40e-14;3!UBERON:0009856;2.80e-11;4!UBERON:0003891;3.60e-11;4!UBERON:0000964;3.60e-11;4!UBERON:0010409;3.60e-11;4!UBERON:0004802;2.17e-09;19!UBERON:0000115;2.17e-09;19!UBERON:0002048;3.04e-08;22!UBERON:0004807;3.04e-08;22!UBERON:0000117;3.04e-08;22!UBERON:0000171;3.04e-08;22!UBERON:0000170;3.04e-08;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,6.62e-41,1;UBERON:0001825,6.62e-41,1;UBERON:0004903,3.81e-21,2;UBERON:0002173,3.81e-21,2;UBERON:0002186,3.81e-21,2;UBERON:0003566,6.96e-21,2;UBERON:0001777,6.96e-21,2;UBERON:0004821,1.40e-14,3;UBERON:0003215,1.40e-14,3;UBERON:0010368,1.40e-14,3;UBERON:0009911,1.40e-14,3;UBERON:0002299,1.40e-14,3;UBERON:0006524,1.40e-14,3;UBERON:0008874,1.40e-14,3;UBERON:0002169,1.40e-14,3;UBERON:0004894,1.40e-14,3;UBERON:0003891,3.79e-11,4;UBERON:0000964,3.79e-11,4;UBERON:0010409,3.79e-11,4;UBERON:0004348,3.79e-11,4;UBERON:0005427,3.79e-11,4;UBERON:0004802,2.17e-09,19;UBERON:0000115,2.17e-09,19;UBERON:0005157,2.21e-08,47;UBERON:0002048,3.04e-08,22;UBERON:0000117,3.04e-08,22;UBERON:0000171,3.04e-08,22;UBERON:0000170,3.04e-08,22;UBERON:0005597,3.04e-08,22;UBERON:0000118,3.04e-08,22 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0.217010870715852,0.223915474239924,0,0,0.436194716338694,0,0,0,0.411167888021826,0,0,0,0,0.344745680736619,0,0,0,0,0.449446968890169,0,0,0,0,0,0,0,0,0,0,0,0.868755378820466,0,0,0.316462387440884,0,0,0.209658645508376,0,0,0.16072558669708,0.285012743741249,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0.760272105718513,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0.252433774244115,0.184099797284599,0.161646056818812,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0.278406173895242,0,0,0,0,0,0,0,0,3.12549761487054,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0.166211681900156,0,0.19606253431774,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0.702793337176017,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.1286554000375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0.0691572524642179,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0,0,0,0,0,0,0.795803100645473,0,2.59775988689608,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0.126166424835079,0,0.126698501011437,0,0,0.0918948995348449,0,0.227336094654718,0.267964130156178,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr9:140348438..140348460,- | |short_description=p@chr9:140348438..140348460,- | ||
}} | }} |
Latest revision as of 00:43, 1 August 2015
Short description: | p@chr9:140348438..140348460, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:140348438..140348460, - |
Coexpression cluster: | C127_maxillary_small_hepatoblastoma_hepatocellular_alveolar_colon_argyrophil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 6.96e-21 | 2 |
migratory cranial neural crest cell | 6.96e-21 | 2 |
pneumocyte | 1.40e-14 | 3 |
epithelial cell of lung | 2.17e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 6.62e-41 | 1 |
paranasal sinus | 6.62e-41 | 1 |
bronchoalveolar duct junction | 3.81e-21 | 2 |
alveolar duct | 3.81e-21 | 2 |
bronchiole | 3.81e-21 | 2 |
head connective tissue | 6.96e-21 | 2 |
substantia propria of cornea | 6.96e-21 | 2 |
pulmonary alveolus epithelium | 1.40e-14 | 3 |
alveolus | 1.40e-14 | 3 |
pulmonary lobule | 1.40e-14 | 3 |
lobule | 1.40e-14 | 3 |
alveolus of lung | 1.40e-14 | 3 |
alveolar system | 1.40e-14 | 3 |
pulmonary acinus | 1.40e-14 | 3 |
alveolar sac | 1.40e-14 | 3 |
alveolar wall | 1.40e-14 | 3 |
stroma | 3.79e-11 | 4 |
cornea | 3.79e-11 | 4 |
eye surface | 3.79e-11 | 4 |
optic eminence | 3.79e-11 | 4 |
corneal primordium | 3.79e-11 | 4 |
respiratory tract epithelium | 2.17e-09 | 19 |
lung epithelium | 2.17e-09 | 19 |
epithelial fold | 2.21e-08 | 47 |
lung | 3.04e-08 | 22 |
respiratory tube | 3.04e-08 | 22 |
respiration organ | 3.04e-08 | 22 |
pair of lungs | 3.04e-08 | 22 |
lung primordium | 3.04e-08 | 22 |
lung bud | 3.04e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 6.62e-41 | 1 |
maxillary sinus cancer | 6.62e-41 | 1 |
bronchus cancer | 1.28e-23 | 7 |
bronchogenic carcinoma | 1.28e-23 | 7 |
respiratory system cancer | 4.17e-23 | 16 |
lung adenocarcinoma | 3.81e-21 | 2 |
lung carcinoma | 1.24e-18 | 9 |
lung cancer | 1.27e-11 | 15 |
lung small cell carcinoma | 3.10e-11 | 4 |
non-small cell lung carcinoma | 2.74e-09 | 5 |