FFCP PHASE1:Hg19::chr9:137283392..137283414,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:137283392..137283414,+ | |||
|coexpression_cluster_id=C810 | |coexpression_cluster_id=C810 | ||
|description=CAGE_peak_at_chr9:137283392..137283414,+ | |description=CAGE_peak_at_chr9:137283392..137283414,+ | ||
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|ontology_enrichment_celltype=CL:0000542!4.60e-34!53;CL:0000051!4.60e-34!53;CL:0000838!6.14e-32!52;CL:0000738!1.40e-26!140;CL:0002031!3.57e-24!124;CL:0002087!8.77e-24!119;CL:0000988!2.02e-22!182;CL:0000037!7.48e-20!172;CL:0000566!7.48e-20!172;CL:0002032!8.73e-20!165;CL:0000837!8.73e-20!165;CL:0000945!2.83e-18!24;CL:0000826!2.83e-18!24;CL:0000084!1.07e-11!25;CL:0000827!1.07e-11!25;CL:0000080!9.07e-10!6;CL:0000624!7.27e-09!6;CL:0002393!1.01e-08!9;CL:0002397!1.01e-08!9;CL:0000791!4.00e-08!18;CL:0000789!4.00e-08!18;CL:0002420!4.00e-08!18;CL:0002419!4.00e-08!18;CL:0000790!4.00e-08!18;CL:0001014!5.86e-08!2;CL:0001016!5.86e-08!2 | |ontology_enrichment_celltype=CL:0000542!4.60e-34!53;CL:0000051!4.60e-34!53;CL:0000838!6.14e-32!52;CL:0000738!1.40e-26!140;CL:0002031!3.57e-24!124;CL:0002087!8.77e-24!119;CL:0000988!2.02e-22!182;CL:0000037!7.48e-20!172;CL:0000566!7.48e-20!172;CL:0002032!8.73e-20!165;CL:0000837!8.73e-20!165;CL:0000945!2.83e-18!24;CL:0000826!2.83e-18!24;CL:0000084!1.07e-11!25;CL:0000827!1.07e-11!25;CL:0000080!9.07e-10!6;CL:0000624!7.27e-09!6;CL:0002393!1.01e-08!9;CL:0002397!1.01e-08!9;CL:0000791!4.00e-08!18;CL:0000789!4.00e-08!18;CL:0002420!4.00e-08!18;CL:0002419!4.00e-08!18;CL:0000790!4.00e-08!18;CL:0001014!5.86e-08!2;CL:0001016!5.86e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.85e-34;24!CL:0000542;5.37e-15;53!CL:0000946;2.11e-14;1!CL:0000786;2.11e-14;1 | |ontology_enrichment_celltype_v019=CL:0000945;2.85e-34;24!CL:0000542;5.37e-15;53!CL:0000946;2.11e-14;1!CL:0000786;2.11e-14;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.85e-34,24;CL:0000826,2.85e-34,24;CL:0000838,2.17e-29,52;CL:0000542,8.16e-29,53;CL:0000051,8.16e-29,53;CL:0000946,2.11e-14,1;CL:0000786,2.11e-14,1;CL:0000980,2.11e-14,1;CL:0000988,4.05e-13,177;CL:0002087,1.64e-12,115;CL:0002031,6.11e-12,120;CL:0000738,2.15e-10,136;CL:0002032,1.40e-08,161;CL:0000837,1.40e-08,161;CL:0000037,3.61e-08,168;CL:0000785,7.52e-08,2;CL:0000955,7.52e-08,2;CL:0000818,7.52e-08,2;CL:0000954,7.52e-08,2;CL:0000816,7.52e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000051;5.37e-15;53!CL:0000954;7.52e-08;2 | |ontology_enrichment_development_v019=CL:0000051;5.37e-15;53!CL:0000954;7.52e-08;2 | ||
|ontology_enrichment_disease=DOID:0060058!7.39e-12!10 | |ontology_enrichment_disease=DOID:0060058!7.39e-12!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;2.76e-21;10!DOID:630;1.07e-14;1!DOID:0050177;1.07e-14;1!DOID:0050427;1.07e-14;1!DOID:2355;1.31e-14;1!DOID:0060060;2.75e-14;1!DOID:0060061;2.75e-14;1!DOID:8691;2.75e-14;1!DOID:74;5.94e-08;2 | |ontology_enrichment_disease_v019=DOID:0060058;2.76e-21;10!DOID:630;1.07e-14;1!DOID:0050177;1.07e-14;1!DOID:0050427;1.07e-14;1!DOID:2355;1.31e-14;1!DOID:0060060;2.75e-14;1!DOID:0060061;2.75e-14;1!DOID:8691;2.75e-14;1!DOID:74;5.94e-08;2 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.69e-21,10;DOID:630,1.07e-14,1;DOID:0050177,1.07e-14,1;DOID:0050427,1.07e-14,1;DOID:2355,1.41e-14,1;DOID:0060060,2.41e-14,1;DOID:0060061,2.41e-14,1;DOID:8691,2.41e-14,1;DOID:74,6.15e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.45e-10!112;UBERON:0002390!9.26e-09!102;UBERON:0003061!9.26e-09!102;UBERON:0000178!8.65e-08!15;UBERON:0000179!8.65e-08!15;UBERON:0000463!8.65e-08!15;UBERON:0004177!2.43e-07!7 | |ontology_enrichment_uberon=UBERON:0002193!1.45e-10!112;UBERON:0002390!9.26e-09!102;UBERON:0003061!9.26e-09!102;UBERON:0000178!8.65e-08!15;UBERON:0000179!8.65e-08!15;UBERON:0000463!8.65e-08!15;UBERON:0004177!2.43e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;7.01e-13;10!UBERON:0000178;9.01e-09;15!UBERON:0000179;9.01e-09;15!UBERON:0000463;9.01e-09;15!UBERON:0002390;7.32e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0002331;7.01e-13;10!UBERON:0000178;9.01e-09;15!UBERON:0000179;9.01e-09;15!UBERON:0000463;9.01e-09;15!UBERON:0002390;7.32e-07;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,7.01e-13,10;UBERON:0000358,7.01e-13,10;UBERON:0000307,7.01e-13,10;UBERON:0000091,7.01e-13,10;UBERON:0000087,7.01e-13,10;UBERON:0007010,7.01e-13,10;UBERON:0007806,7.01e-13,10;UBERON:0008780,7.01e-13,10;UBERON:0005728,7.01e-13,10;UBERON:0000178,9.01e-09,15;UBERON:0000179,9.01e-09,15;UBERON:0000463,9.01e-09,15 | |||
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| ||
|short_description=p@chr9:137283392..137283414,+ | |short_description=p@chr9:137283392..137283414,+ | ||
}} | }} |
Latest revision as of 00:04, 1 August 2015
Short description: | p@chr9:137283392..137283414, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:137283392..137283414, + |
Coexpression cluster: | C810_b_cord_xeroderma_adult_plasma_splenic_hairy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.85e-34 | 24 |
pro-B cell | 2.85e-34 | 24 |
lymphoid lineage restricted progenitor cell | 2.17e-29 | 52 |
lymphocyte | 8.16e-29 | 53 |
common lymphoid progenitor | 8.16e-29 | 53 |
antibody secreting cell | 2.11e-14 | 1 |
plasma cell | 2.11e-14 | 1 |
plasmablast | 2.11e-14 | 1 |
hematopoietic cell | 4.05e-13 | 177 |
nongranular leukocyte | 1.64e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 6.11e-12 | 120 |
leukocyte | 2.15e-10 | 136 |
hematopoietic oligopotent progenitor cell | 1.40e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.40e-08 | 161 |
hematopoietic stem cell | 3.61e-08 | 168 |
mature B cell | 7.52e-08 | 2 |
pre-B-II cell | 7.52e-08 | 2 |
transitional stage B cell | 7.52e-08 | 2 |
small pre-B-II cell | 7.52e-08 | 2 |
immature B cell | 7.52e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 7.01e-13 | 10 |
blastocyst | 7.01e-13 | 10 |
blastula | 7.01e-13 | 10 |
bilaminar disc | 7.01e-13 | 10 |
inner cell mass | 7.01e-13 | 10 |
cleaving embryo | 7.01e-13 | 10 |
connecting stalk | 7.01e-13 | 10 |
inner cell mass derived epiblast | 7.01e-13 | 10 |
extraembryonic mesoderm | 7.01e-13 | 10 |
blood | 9.01e-09 | 15 |
haemolymphatic fluid | 9.01e-09 | 15 |
organism substance | 9.01e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.69e-21 | 10 |
genetic disease | 1.07e-14 | 1 |
monogenic disease | 1.07e-14 | 1 |
xeroderma pigmentosum | 1.07e-14 | 1 |
anemia | 1.41e-14 | 1 |
non-Hodgkin lymphoma | 2.41e-14 | 1 |
cutaneous T cell lymphoma | 2.41e-14 | 1 |
mycosis fungoides | 2.41e-14 | 1 |
hematopoietic system disease | 6.15e-08 | 2 |