FFCP PHASE1:Hg19::chr9:132251160..132251219,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:132251160..132251219,+
|short_description=p1@ENST00000419300
|description=CAGE_peak_1_at_ENST00000419300_5end
|association_with_transcript=-159bp_to_ENST00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-159bp_to_ENST00000419300_5end | |||
|cluster_id=chr9:132251160..132251219,+ | |||
|coexpression_cluster_id=C4803 | |||
|description=CAGE_peak_1_at_ENST00000419300_5end | |||
|id=chr9:132251160..132251219,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.34e-31!76;CL:0000557!4.64e-26!71;CL:0000860!6.61e-25!45;CL:0000839!9.18e-25!70;CL:0002194!1.51e-24!63;CL:0000576!1.51e-24!63;CL:0000040!1.51e-24!63;CL:0000559!1.51e-24!63;CL:0002009!3.95e-24!65;CL:0002057!3.21e-23!42;CL:0000763!1.03e-10!112;CL:0000049!1.03e-10!112;CL:0000738!4.44e-09!140;CL:0000012!9.94e-08!682;CL:0000548!1.35e-07!679;CL:0000004!1.35e-07!679;CL:0000255!1.35e-07!679;CL:0002031!4.84e-07!124;CL:0002087!6.42e-07!119;CL:0000063!8.56e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.66e-19;33!CL:0002057;1.66e-19;33!CL:0000473;6.27e-19;39!CL:0000234;6.27e-19;39!CL:0000576;3.90e-14;48!CL:0000766;7.04e-14;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.41e-31,72;CL:0000473,8.43e-27,48;CL:0000234,8.43e-27,48;CL:0000557,1.57e-25,67;CL:0000839,1.54e-24,66;CL:0002194,5.11e-24,59;CL:0000576,5.11e-24,59;CL:0000040,5.11e-24,59;CL:0000559,5.11e-24,59;CL:0000860,1.12e-23,42;CL:0002057,1.12e-23,42;CL:0002009,1.41e-23,61;CL:0000763,1.95e-10,108;CL:0000049,1.95e-10,108;CL:0000738,5.86e-10,136;CL:0002031,7.30e-08,120;CL:0002087,1.65e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.80e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.51e-21!80;UBERON:0002390!6.51e-21!102;UBERON:0003061!6.51e-21!102;UBERON:0002193!4.44e-20!112;UBERON:0001474!1.93e-19!86;UBERON:0002405!3.92e-18!115;UBERON:0003081!1.37e-17!216;UBERON:0004765!1.43e-15!101;UBERON:0001434!1.43e-15!101;UBERON:0000926!1.47e-14!448;UBERON:0004120!1.47e-14!448;UBERON:0006603!1.47e-14!448;UBERON:0002204!1.31e-09!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.73e-20,76;UBERON:0002390,2.77e-20,98;UBERON:0003061,2.77e-20,98;UBERON:0002193,1.47e-19,108;UBERON:0001474,1.37e-18,82;UBERON:0004765,3.87e-17,90;UBERON:0002405,1.13e-16,93;UBERON:0003081,6.44e-16,203;UBERON:0001434,1.97e-14,100;UBERON:0000926,5.03e-09,315;UBERON:0004120,5.03e-09,315;UBERON:0006603,5.03e-09,315;UBERON:0002204,1.43e-08,167 | |||
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| ||
|short_description=p1@ENST00000419300 | |||
}} | }} |
Latest revision as of 23:26, 31 July 2015
Short description: | p1@ENST00000419300 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000419300_5end |
Coexpression cluster: | C4803_CD14_Mast_serous_Eosinophils_cord_ductus_epididymis |
Association with transcript: | -159bp_to_ENST00000419300_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.41e-31 | 72 |
defensive cell | 8.43e-27 | 48 |
phagocyte | 8.43e-27 | 48 |
granulocyte monocyte progenitor cell | 1.57e-25 | 67 |
myeloid lineage restricted progenitor cell | 1.54e-24 | 66 |
monopoietic cell | 5.11e-24 | 59 |
monocyte | 5.11e-24 | 59 |
monoblast | 5.11e-24 | 59 |
promonocyte | 5.11e-24 | 59 |
classical monocyte | 1.12e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.12e-23 | 42 |
macrophage dendritic cell progenitor | 1.41e-23 | 61 |
myeloid cell | 1.95e-10 | 108 |
common myeloid progenitor | 1.95e-10 | 108 |
leukocyte | 5.86e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 7.30e-08 | 120 |
nongranular leukocyte | 1.65e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.73e-20 | 76 |
hematopoietic system | 2.77e-20 | 98 |
blood island | 2.77e-20 | 98 |
hemolymphoid system | 1.47e-19 | 108 |
bone element | 1.37e-18 | 82 |
skeletal element | 3.87e-17 | 90 |
immune system | 1.13e-16 | 93 |
lateral plate mesoderm | 6.44e-16 | 203 |
skeletal system | 1.97e-14 | 100 |
mesoderm | 5.03e-09 | 315 |
mesoderm-derived structure | 5.03e-09 | 315 |
presumptive mesoderm | 5.03e-09 | 315 |
musculoskeletal system | 1.43e-08 | 167 |