FFCP PHASE1:Hg19::chr9:132222848..132222877,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:132222848..132222877,+ | |||
|coexpression_cluster_id=C4802 | |coexpression_cluster_id=C4802 | ||
|description=CAGE_peak_at_chr9:132222848..132222877,+ | |description=CAGE_peak_at_chr9:132222848..132222877,+ | ||
|id=chr9:132222848..132222877,+ | |id=chr9:132222848..132222877,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.70e-23!42;CL:0000860!6.32e-23!45;CL:0000766!2.61e-21!76;CL:0000557!2.20e-17!71;CL:0002009!8.73e-16!65;CL:0002194!2.26e-15!63;CL:0000576!2.26e-15!63;CL:0000040!2.26e-15!63;CL:0000559!2.26e-15!63;CL:0000839!4.17e-15!70;CL:0000763!5.64e-11!112;CL:0000049!5.64e-11!112;CL:0000738!4.94e-10!140;CL:0000094!6.94e-07!8;CL:0002393!8.20e-07!9;CL:0002397!8.20e-07!9 | |ontology_enrichment_celltype=CL:0002057!1.70e-23!42;CL:0000860!6.32e-23!45;CL:0000766!2.61e-21!76;CL:0000557!2.20e-17!71;CL:0002009!8.73e-16!65;CL:0002194!2.26e-15!63;CL:0000576!2.26e-15!63;CL:0000040!2.26e-15!63;CL:0000559!2.26e-15!63;CL:0000839!4.17e-15!70;CL:0000763!5.64e-11!112;CL:0000049!5.64e-11!112;CL:0000738!4.94e-10!140;CL:0000094!6.94e-07!8;CL:0002393!8.20e-07!9;CL:0002397!8.20e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.46e-29;33!CL:0002057;1.46e-29;33!CL:0000576;4.89e-23;48!CL:0000766;2.49e-20;69!CL:0000473;6.35e-20;39!CL:0000234;6.35e-20;39!CL:0000094;9.21e-13;8!CL:0000081;1.55e-10;11!CL:0002393;4.15e-09;6!CL:0002397;4.15e-09;6!CL:0000763;1.18e-08;100!CL:0002087;1.92e-07;104!CL:0000738;3.00e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.65e-42,42;CL:0002057,1.65e-42,42;CL:0000766,1.54e-40,72;CL:0000473,1.66e-37,48;CL:0000234,1.66e-37,48;CL:0000557,4.70e-30,67;CL:0000839,2.88e-29,66;CL:0000738,1.25e-28,136;CL:0002194,1.90e-28,59;CL:0000576,1.90e-28,59;CL:0000040,1.90e-28,59;CL:0000559,1.90e-28,59;CL:0002009,4.57e-27,61;CL:0000763,3.14e-23,108;CL:0000049,3.14e-23,108;CL:0000037,1.15e-21,168;CL:0000988,5.35e-21,177;CL:0002087,5.53e-21,115;CL:0002031,7.22e-20,120;CL:0002032,5.85e-19,161;CL:0000837,5.85e-19,161;CL:0000094,9.35e-13,8;CL:0002393,1.33e-12,9;CL:0002397,1.33e-12,9;CL:0000081,1.30e-10,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.60e-29;42!CL:0000049;9.46e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.61e-16!102;UBERON:0003061!1.61e-16!102;UBERON:0003081!1.03e-15!216;UBERON:0002371!4.30e-14!80;UBERON:0002193!7.62e-14!112;UBERON:0001474!2.32e-13!86;UBERON:0004765!1.89e-09!101;UBERON:0001434!1.89e-09!101;UBERON:0002204!4.49e-08!167;UBERON:0002405!9.87e-08!115;UBERON:0000926!9.42e-07!448;UBERON:0004120!9.42e-07!448;UBERON:0006603!9.42e-07!448 | |ontology_enrichment_uberon=UBERON:0002390!1.61e-16!102;UBERON:0003061!1.61e-16!102;UBERON:0003081!1.03e-15!216;UBERON:0002371!4.30e-14!80;UBERON:0002193!7.62e-14!112;UBERON:0001474!2.32e-13!86;UBERON:0004765!1.89e-09!101;UBERON:0001434!1.89e-09!101;UBERON:0002204!4.49e-08!167;UBERON:0002405!9.87e-08!115;UBERON:0000926!9.42e-07!448;UBERON:0004120!9.42e-07!448;UBERON:0006603!9.42e-07!448 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.66e-08;15!UBERON:0000179;2.66e-08;15!UBERON:0000463;2.66e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.33e-31,98;UBERON:0003061,3.33e-31,98;UBERON:0002193,1.46e-26,108;UBERON:0003081,2.59e-26,203;UBERON:0002371,4.05e-26,76;UBERON:0001474,4.22e-23,82;UBERON:0004765,9.87e-20,90;UBERON:0002405,1.03e-19,93;UBERON:0001434,2.53e-16,100;UBERON:0000926,3.32e-13,315;UBERON:0004120,3.32e-13,315;UBERON:0006603,3.32e-13,315;UBERON:0002204,2.42e-11,167;UBERON:0000178,2.05e-08,15;UBERON:0000179,2.05e-08,15;UBERON:0000463,2.05e-08,15 | |||
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| ||
|short_description=p@chr9:132222848..132222877,+ | |short_description=p@chr9:132222848..132222877,+ | ||
}} | }} |
Latest revision as of 23:25, 31 July 2015
Short description: | p@chr9:132222848..132222877, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:132222848..132222877, + |
Coexpression cluster: | C4802_Mast_Neutrophils_Eosinophils_Natural_CD14_Basophils_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.65e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.65e-42 | 42 |
myeloid leukocyte | 1.54e-40 | 72 |
defensive cell | 1.66e-37 | 48 |
phagocyte | 1.66e-37 | 48 |
granulocyte monocyte progenitor cell | 4.70e-30 | 67 |
myeloid lineage restricted progenitor cell | 2.88e-29 | 66 |
leukocyte | 1.25e-28 | 136 |
monopoietic cell | 1.90e-28 | 59 |
monocyte | 1.90e-28 | 59 |
monoblast | 1.90e-28 | 59 |
promonocyte | 1.90e-28 | 59 |
macrophage dendritic cell progenitor | 4.57e-27 | 61 |
myeloid cell | 3.14e-23 | 108 |
common myeloid progenitor | 3.14e-23 | 108 |
hematopoietic stem cell | 1.15e-21 | 168 |
hematopoietic cell | 5.35e-21 | 177 |
nongranular leukocyte | 5.53e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 7.22e-20 | 120 |
hematopoietic oligopotent progenitor cell | 5.85e-19 | 161 |
hematopoietic multipotent progenitor cell | 5.85e-19 | 161 |
granulocyte | 9.35e-13 | 8 |
intermediate monocyte | 1.33e-12 | 9 |
CD14-positive, CD16-positive monocyte | 1.33e-12 | 9 |
blood cell | 1.30e-10 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.33e-31 | 98 |
blood island | 3.33e-31 | 98 |
hemolymphoid system | 1.46e-26 | 108 |
lateral plate mesoderm | 2.59e-26 | 203 |
bone marrow | 4.05e-26 | 76 |
bone element | 4.22e-23 | 82 |
skeletal element | 9.87e-20 | 90 |
immune system | 1.03e-19 | 93 |
skeletal system | 2.53e-16 | 100 |
mesoderm | 3.32e-13 | 315 |
mesoderm-derived structure | 3.32e-13 | 315 |
presumptive mesoderm | 3.32e-13 | 315 |
musculoskeletal system | 2.42e-11 | 167 |
blood | 2.05e-08 | 15 |
haemolymphatic fluid | 2.05e-08 | 15 |
organism substance | 2.05e-08 | 15 |