FFCP PHASE1:Hg19::chr9:131864675..131864680,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:131864675..131864680,- | |||
|coexpression_cluster_id=C558 | |coexpression_cluster_id=C558 | ||
|description=CAGE_peak_at_chr9:131864675..131864680,- | |description=CAGE_peak_at_chr9:131864675..131864680,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000183!1.13e-08!59;CL:0000055!4.39e-08!180;CL:0000393!3.27e-07!60;CL:0000211!3.27e-07!60;CL:0000187!4.14e-07!54;CL:1000487!5.05e-07!2 | |ontology_enrichment_celltype=CL:0000183!1.13e-08!59;CL:0000055!4.39e-08!180;CL:0000393!3.27e-07!60;CL:0000211!3.27e-07!60;CL:0000187!4.14e-07!54;CL:1000487!5.05e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000346;2.74e-12;3!CL:1000428;2.74e-12;3!CL:0002559;6.78e-08;5!CL:0002552;6.78e-08;5 | |ontology_enrichment_celltype_v019=CL:0000346;2.74e-12;3!CL:1000428;2.74e-12;3!CL:0002559;6.78e-08;5!CL:0002552;6.78e-08;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000346,2.59e-12,3;CL:1000428,2.59e-12,3;CL:0002559,6.55e-08,5;CL:0002552,7.01e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.04e-14;10!UBERON:0005564;3.04e-14;10 | |ontology_enrichment_development_v019=UBERON:0009117;3.04e-14;10!UBERON:0005564;3.04e-14;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000162!4.33e-07!14;UBERON:0001353!4.33e-07!14;UBERON:0000163!4.33e-07!14;UBERON:0006866!4.33e-07!14;UBERON:0000164!4.33e-07!14;UBERON:0000931!4.33e-07!14;UBERON:0000914!5.34e-07!83;UBERON:0002329!5.34e-07!83;UBERON:0003077!5.34e-07!83;UBERON:0003059!5.34e-07!83;UBERON:0007282!5.34e-07!83;UBERON:0009618!5.34e-07!83;UBERON:0007285!5.34e-07!83 | |ontology_enrichment_uberon=UBERON:0000162!4.33e-07!14;UBERON:0001353!4.33e-07!14;UBERON:0000163!4.33e-07!14;UBERON:0006866!4.33e-07!14;UBERON:0000164!4.33e-07!14;UBERON:0000931!4.33e-07!14;UBERON:0000914!5.34e-07!83;UBERON:0002329!5.34e-07!83;UBERON:0003077!5.34e-07!83;UBERON:0003059!5.34e-07!83;UBERON:0007282!5.34e-07!83;UBERON:0009618!5.34e-07!83;UBERON:0007285!5.34e-07!83 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.57e-17;8!UBERON:0003135;4.80e-13;11!UBERON:0000412;2.74e-12;3!UBERON:0001992;2.74e-12;3!UBERON:0002073;6.78e-08;5!UBERON:0000991;2.69e-07;21!UBERON:0003101;5.24e-07;22!UBERON:0000079;5.24e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0000473;1.57e-17;8!UBERON:0003135;4.80e-13;11!UBERON:0000412;2.74e-12;3!UBERON:0001992;2.74e-12;3!UBERON:0002073;6.78e-08;5!UBERON:0000991;2.69e-07;21!UBERON:0003101;5.24e-07;22!UBERON:0000079;5.24e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.71e-17,8;UBERON:0003135,5.10e-13,11;UBERON:0000412,2.59e-12,3;UBERON:0001992,2.59e-12,3;UBERON:0002073,6.55e-08,5;UBERON:0005086,6.55e-08,5;UBERON:0000991,2.77e-07,21;UBERON:0009196,2.77e-07,21;UBERON:0009117,2.77e-07,21;UBERON:0005564,2.77e-07,21;UBERON:0004176,5.40e-07,22;UBERON:0003101,5.40e-07,22;UBERON:0000079,5.40e-07,22 | |||
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| ||
|short_description=p@chr9:131864675..131864680,- | |short_description=p@chr9:131864675..131864680,- | ||
}} | }} |
Latest revision as of 23:21, 31 July 2015
Short description: | p@chr9:131864675..131864680, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:131864675..131864680, - |
Coexpression cluster: | C558_Mesenchymal_testis_Smooth_Endothelial_Placental_Tracheal_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 2.59e-12 | 3 |
stem cell of epidermis | 2.59e-12 | 3 |
hair follicle cell | 6.55e-08 | 5 |
fibroblast of gingiva | 7.01e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 1.71e-17 | 8 |
male reproductive organ | 5.10e-13 | 11 |
dermal papilla | 2.59e-12 | 3 |
papillary layer of dermis | 2.59e-12 | 3 |
hair follicle | 6.55e-08 | 5 |
hair follicle placode | 6.55e-08 | 5 |
gonad | 2.77e-07 | 21 |
indifferent external genitalia | 2.77e-07 | 21 |
indifferent gonad | 2.77e-07 | 21 |
gonad primordium | 2.77e-07 | 21 |
external genitalia | 5.40e-07 | 22 |
male organism | 5.40e-07 | 22 |
male reproductive system | 5.40e-07 | 22 |