FFCP PHASE1:Hg19::chr9:130912567..130912578,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:130912567..130912578,- | |||
|coexpression_cluster_id=C484 | |coexpression_cluster_id=C484 | ||
|description=CAGE_peak_at_chr9:130912567..130912578,- | |description=CAGE_peak_at_chr9:130912567..130912578,- | ||
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|ontology_enrichment_celltype=CL:0002076!1.60e-13!43;CL:0000223!5.48e-12!59;CL:0000066!1.31e-10!254;CL:0002368!1.61e-09!13;CL:0002202!8.83e-07!9;CL:0002632!8.83e-07!9 | |ontology_enrichment_celltype=CL:0002076!1.60e-13!43;CL:0000223!5.48e-12!59;CL:0000066!1.31e-10!254;CL:0002368!1.61e-09!13;CL:0002202!8.83e-07!9;CL:0002632!8.83e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:1001319;6.46e-17;1!CL:1000600;6.46e-17;1!CL:0000575;6.17e-09;2!CL:1000415;6.17e-09;2 | |ontology_enrichment_celltype_v019=CL:1001319;6.46e-17;1!CL:1000600;6.46e-17;1!CL:0000575;6.17e-09;2!CL:1000415;6.17e-09;2 | ||
|ontology_enrichment_celltype_v019_2=CL:1001319,6.47e-17,1;CL:1000600,6.47e-17,1;CL:0002076,3.94e-09,42;CL:0000575,5.49e-09,2;CL:1000415,8.09e-09,2;CL:0000066,1.41e-07,253 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:299!3.20e-15!25;DOID:305!2.78e-12!106;DOID:1749!1.81e-08!14;DOID:3493!2.51e-08!2;DOID:4929!6.86e-08!2;DOID:0050687!1.02e-07!143 | |ontology_enrichment_disease=DOID:299!3.20e-15!25;DOID:305!2.78e-12!106;DOID:1749!1.81e-08!14;DOID:3493!2.51e-08!2;DOID:4929!6.86e-08!2;DOID:0050687!1.02e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:3111;1.53e-16;1!DOID:3603;1.53e-16;1!DOID:3493;6.17e-09;2 | |ontology_enrichment_disease_v019=DOID:3111;1.53e-16;1!DOID:3603;1.53e-16;1!DOID:3493;6.17e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3111,1.93e-16,1;DOID:3603,1.93e-16,1;DOID:305,6.72e-11,106;DOID:3493,4.70e-09,2;DOID:0050687,7.46e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0007196!4.12e-09!14;UBERON:0001558!4.12e-09!14;UBERON:0003126!7.30e-09!7;UBERON:0001005!7.30e-09!7;UBERON:0002394!8.98e-09!4;UBERON:0003928!8.98e-09!4;UBERON:0003127!1.07e-08!2;UBERON:0002294!1.26e-08!7;UBERON:0001173!1.26e-08!7;UBERON:0004912!1.26e-08!7;UBERON:0000466!1.88e-08!126;UBERON:0004119!4.69e-08!169;UBERON:0000925!4.69e-08!169;UBERON:0006595!4.69e-08!169;UBERON:0001041!1.12e-07!98;UBERON:0001007!1.38e-07!155;UBERON:0001555!1.38e-07!155;UBERON:0007026!1.38e-07!155;UBERON:0004921!2.57e-07!129;UBERON:0004185!2.57e-07!129;UBERON:0000077!2.69e-07!130;UBERON:0000464!5.96e-07!104 | |ontology_enrichment_uberon=UBERON:0007196!4.12e-09!14;UBERON:0001558!4.12e-09!14;UBERON:0003126!7.30e-09!7;UBERON:0001005!7.30e-09!7;UBERON:0002394!8.98e-09!4;UBERON:0003928!8.98e-09!4;UBERON:0003127!1.07e-08!2;UBERON:0002294!1.26e-08!7;UBERON:0001173!1.26e-08!7;UBERON:0004912!1.26e-08!7;UBERON:0000466!1.88e-08!126;UBERON:0004119!4.69e-08!169;UBERON:0000925!4.69e-08!169;UBERON:0006595!4.69e-08!169;UBERON:0001041!1.12e-07!98;UBERON:0001007!1.38e-07!155;UBERON:0001555!1.38e-07!155;UBERON:0007026!1.38e-07!155;UBERON:0004921!2.57e-07!129;UBERON:0004185!2.57e-07!129;UBERON:0000077!2.69e-07!130;UBERON:0000464!5.96e-07!104 | ||
|ontology_enrichment_uberon_v019=UBERON:0004645;6.46e-17;1!UBERON:0001256;6.46e-17;1!UBERON:0001259;6.46e-17;1!UBERON:0003126;1.18e-09;7!UBERON:0001005;1.18e-09;7!UBERON:0002294;1.18e-09;7!UBERON:0001173;1.18e-09;7!UBERON:0006562;3.71e-09;2!UBERON:0001255;4.01e-09;2!UBERON:0001556;4.01e-09;2!UBERON:0003127;6.17e-09;2 | |ontology_enrichment_uberon_v019=UBERON:0004645;6.46e-17;1!UBERON:0001256;6.46e-17;1!UBERON:0001259;6.46e-17;1!UBERON:0003126;1.18e-09;7!UBERON:0001005;1.18e-09;7!UBERON:0002294;1.18e-09;7!UBERON:0001173;1.18e-09;7!UBERON:0006562;3.71e-09;2!UBERON:0001255;4.01e-09;2!UBERON:0001556;4.01e-09;2!UBERON:0003127;6.17e-09;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,6.47e-17,1;UBERON:0001256,6.47e-17,1;UBERON:0001259,6.47e-17,1;UBERON:0003126,1.09e-09,7;UBERON:0001005,1.09e-09,7;UBERON:0001255,4.02e-09,2;UBERON:0001556,4.02e-09,2;UBERON:0003127,5.08e-09,2;UBERON:0002294,1.02e-07,9;UBERON:0001173,1.02e-07,9;UBERON:0004912,1.02e-07,9 | |||
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| ||
|short_description=p@chr9:130912567..130912578,- | |short_description=p@chr9:130912567..130912578,- | ||
}} | }} |
Latest revision as of 23:07, 31 July 2015
Short description: | p@chr9:130912567..130912578, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:130912567..130912578, - |
Coexpression cluster: | C484_squamous_pharyngeal_bile_transitionalcell_Prostate_signet_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 6.47e-17 | 1 |
lower urinary tract cell | 6.47e-17 | 1 |
endo-epithelial cell | 3.94e-09 | 42 |
corneal epithelial cell | 5.49e-09 | 2 |
epithelial cell of gall bladder | 8.09e-09 | 2 |
epithelial cell | 1.41e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 6.47e-17 | 1 |
wall of urinary bladder | 6.47e-17 | 1 |
mucosa of urinary bladder | 6.47e-17 | 1 |
trachea | 1.09e-09 | 7 |
respiratory airway | 1.09e-09 | 7 |
urinary bladder | 4.02e-09 | 2 |
lower urinary tract | 4.02e-09 | 2 |
open tracheal system trachea | 5.08e-09 | 2 |
biliary system | 1.02e-07 | 9 |
biliary tree | 1.02e-07 | 9 |
biliary bud | 1.02e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 1.93e-16 | 1 |
mucinous cystadenocarcinoma | 1.93e-16 | 1 |
carcinoma | 6.72e-11 | 106 |
signet ring cell adenocarcinoma | 4.70e-09 | 2 |
cell type cancer | 7.46e-08 | 143 |