FFCP PHASE1:Hg19::chr9:119601047..119601058,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=307bp_to_uc004bjy.2_5end | |||
|cluster_id=chr9:119601047..119601058,+ | |||
|coexpression_cluster_id=C4370 | |||
|description=CAGE_peak_2_at_uc004bjy.2_5end | |||
|id=chr9:119601047..119601058,+ | |||
|ontology_enrichment_celltype=CL:0000039!3.56e-26!7;CL:0000586!3.56e-26!7;CL:0002541!1.01e-22!3;CL:0000313!6.03e-09!1;CL:0000083!3.80e-08!4;CL:1001319!4.07e-08!1;CL:1000600!4.07e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000039;4.98e-51;7!CL:0000586;4.98e-51;7!CL:0000313;1.21e-40;1!CL:0000159;4.21e-21;2!CL:0002541;1.22e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.43e-51,7;CL:0000586,5.43e-51,7;CL:0000313,9.91e-41,1;CL:0000159,3.81e-21,2;CL:0002541,1.22e-14,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.49e-63;10!UBERON:0005564;3.49e-63;10!UBERON:0006603;2.13e-07;65 | |||
|ontology_enrichment_disease=DOID:3095!1.63e-11!22;DOID:2994!1.63e-11!22;DOID:305!4.98e-09!106;DOID:2152!6.03e-09!1;DOID:1799!8.78e-09!1;DOID:10165!8.78e-09!1;DOID:1798!8.78e-09!1;DOID:3151!1.48e-08!1;DOID:3149!1.48e-08!1;DOID:1793!3.80e-08!4;DOID:0050687!3.33e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:2152;1.21e-40;1!DOID:3095;6.21e-17;22!DOID:2994;6.21e-17;22 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,9.91e-41,1;DOID:3095,6.38e-17,22;DOID:2994,6.38e-17,22 | |||
|ontology_enrichment_uberon=UBERON:0000476!1.01e-22!3;UBERON:0000920!1.01e-22!3;UBERON:0000473!4.91e-15!8;UBERON:0002323!2.35e-11!46;UBERON:0003135!5.62e-11!11;UBERON:0004458!1.42e-10!49;UBERON:0003124!4.75e-10!7;UBERON:0004911!6.03e-09!1;UBERON:0000991!1.10e-08!21;UBERON:0009196!1.10e-08!21;UBERON:0009117!1.10e-08!21;UBERON:0005564!1.10e-08!21;UBERON:0002372!1.27e-08!1;UBERON:0001961!1.27e-08!1;UBERON:0001744!1.27e-08!1;UBERON:0001735!1.27e-08!1;UBERON:0004176!2.80e-08!22;UBERON:0004645!4.07e-08!1;UBERON:0001256!4.07e-08!1;UBERON:0001259!4.07e-08!1;UBERON:0003886!6.46e-08!63;UBERON:0002553!5.48e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.54e-45;8!UBERON:0004911;1.21e-40;1!UBERON:0003135;7.02e-33;11!UBERON:0000991;1.31e-30;21!UBERON:0004909;4.21e-21;2!UBERON:0003101;6.21e-17;22!UBERON:0000079;6.21e-17;22!UBERON:0003124;1.22e-14;3!UBERON:0000920;1.22e-14;3!UBERON:0003133;4.49e-13;44!UBERON:0002323;4.58e-13;45!UBERON:0002553;1.65e-10;52!UBERON:0005156;4.28e-09;59!UBERON:0000990;4.28e-09;59!UBERON:0004458;2.53e-08;48!UBERON:0000922;4.94e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.20e-45,8;UBERON:0004911,9.91e-41,1;UBERON:0003135,7.42e-33,11;UBERON:0000991,1.31e-30,21;UBERON:0009196,1.31e-30,21;UBERON:0009117,1.31e-30,21;UBERON:0005564,1.31e-30,21;UBERON:0004176,2.94e-29,22;UBERON:0004909,3.81e-21,2;UBERON:0003101,6.38e-17,22;UBERON:0000079,6.38e-17,22;UBERON:0000920,1.22e-14,3;UBERON:0002323,2.03e-14,46;UBERON:0003133,7.54e-14,48;UBERON:0004458,1.40e-13,49;UBERON:0003886,2.17e-12,54;UBERON:0005156,2.13e-11,59;UBERON:0000990,2.13e-11,59;UBERON:0002553,4.78e-11,61;UBERON:0003124,5.08e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.83654246567162,0,0,0,0.359030577639089,0,0.31900115973192,4.67147726349498,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0.195551382734803,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0.785720083444267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,3.46751838573156,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327796715891087,0,1.42784361638774,1.60330443159336,3.21632148371957,0.250707539292375,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0.404112318087525,0,0,0.0814032686109745,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p2@uc004bjy.2 | |||
}} |
Latest revision as of 22:14, 31 July 2015
Short description: | p2@uc004bjy.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_uc004bjy.2_5end |
Coexpression cluster: | C4370_testicular_serous_chorionic_retinoblastoma_endometrial_gall_pancreatic |
Association with transcript: | 307bp_to_uc004bjy.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.43e-51 | 7 |
germ cell | 5.43e-51 | 7 |
serous secreting cell | 9.91e-41 | 1 |
seromucus secreting cell | 3.81e-21 | 2 |
chorionic membrane mesenchymal stem cell | 1.22e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 9.20e-45 | 8 |
epithelium of female gonad | 9.91e-41 | 1 |
male reproductive organ | 7.42e-33 | 11 |
gonad | 1.31e-30 | 21 |
indifferent external genitalia | 1.31e-30 | 21 |
indifferent gonad | 1.31e-30 | 21 |
gonad primordium | 1.31e-30 | 21 |
external genitalia | 2.94e-29 | 22 |
epithelium of gonad | 3.81e-21 | 2 |
male organism | 6.38e-17 | 22 |
male reproductive system | 6.38e-17 | 22 |
egg chorion | 1.22e-14 | 3 |
body cavity | 2.03e-14 | 46 |
reproductive organ | 7.54e-14 | 48 |
body cavity or lining | 1.40e-13 | 49 |
body cavity precursor | 2.17e-12 | 54 |
reproductive structure | 2.13e-11 | 59 |
reproductive system | 2.13e-11 | 59 |
anatomical cavity | 4.78e-11 | 61 |
chorion | 5.08e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 9.91e-41 | 1 |
germ cell and embryonal cancer | 6.38e-17 | 22 |
germ cell cancer | 6.38e-17 | 22 |