FFCP PHASE1:Hg19::chr9:117147710..117147721,-: Difference between revisions
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|id=chr9:117147710..117147721,-
|short_description=p@chr9:117147710..117147721,-
|description=CAGE_peak_at_chr9:117147710..117147721,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:117147710..117147721,- | |||
|coexpression_cluster_id=C654 | |||
|description=CAGE_peak_at_chr9:117147710..117147721,- | |||
|id=chr9:117147710..117147721,- | |||
|ontology_enrichment_celltype=CL:0000738!3.22e-45!140;CL:0000037!3.29e-38!172;CL:0000566!3.29e-38!172;CL:0000988!5.13e-38!182;CL:0002032!1.53e-35!165;CL:0000837!1.53e-35!165;CL:0000838!2.90e-35!52;CL:0000542!2.02e-34!53;CL:0000051!2.02e-34!53;CL:0002087!5.85e-32!119;CL:0002031!2.18e-31!124;CL:0000791!4.03e-31!18;CL:0000789!4.03e-31!18;CL:0002420!4.03e-31!18;CL:0002419!4.03e-31!18;CL:0000790!4.03e-31!18;CL:0000084!1.06e-26!25;CL:0000827!1.06e-26!25;CL:0000625!3.19e-26!11;CL:0000094!1.33e-15!8;CL:0000081!6.32e-14!11;CL:0002393!6.89e-12!9;CL:0002397!6.89e-12!9;CL:0000134!5.23e-10!358;CL:0000766!6.97e-10!76;CL:0000080!1.37e-09!6;CL:0002320!1.58e-09!365;CL:0000763!2.69e-09!112;CL:0000049!2.69e-09!112;CL:0000624!3.80e-09!6;CL:0000775!8.46e-09!3;CL:0000623!9.58e-09!3;CL:0000825!9.58e-09!3;CL:0000842!3.31e-08!3;CL:0000219!7.39e-08!390;CL:0000945!2.80e-07!24;CL:0000826!2.80e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000625;2.71e-62;11!CL:0000094;4.96e-44;8!CL:0000791;1.77e-37;18!CL:0000789;1.77e-37;18!CL:0002419;1.77e-37;18!CL:0000081;7.82e-32;11!CL:0000084;1.52e-26;25!CL:0000775;6.04e-23;3!CL:0000623;8.11e-23;3!CL:0000771;4.44e-16;2!CL:0000542;1.09e-10;53!CL:0000767;2.61e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.98e-62,11;CL:0000094,3.63e-44,8;CL:0000791,1.46e-37,18;CL:0000789,1.46e-37,18;CL:0002420,1.46e-37,18;CL:0002419,1.46e-37,18;CL:0000790,1.46e-37,18;CL:0000081,6.24e-32,11;CL:0000084,1.32e-26,25;CL:0000827,1.32e-26,25;CL:0000738,1.02e-23,136;CL:0000775,5.23e-23,3;CL:0000623,7.56e-23,3;CL:0000825,7.56e-23,3;CL:0000838,9.10e-21,52;CL:0000542,2.49e-20,53;CL:0000051,2.49e-20,53;CL:0000037,1.94e-18,168;CL:0002032,1.74e-17,161;CL:0000837,1.74e-17,161;CL:0000988,2.71e-17,177;CL:0000771,3.83e-16,2;CL:0002087,5.60e-11,115;CL:0002031,2.12e-10,120;CL:0000767,2.49e-10,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.77e-37;18!CL:0000051;1.09e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.42e-20!15;UBERON:0000179!3.42e-20!15;UBERON:0000463!3.42e-20!15;UBERON:0002390!1.10e-14!102;UBERON:0003061!1.10e-14!102;UBERON:0002193!1.28e-12!112;UBERON:0002384!7.07e-09!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.84e-08;15!UBERON:0000179;8.84e-08;15!UBERON:0000463;8.84e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.77e-08,15;UBERON:0000179,9.77e-08,15;UBERON:0000463,9.77e-08,15 | |||
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| ||
|short_description=p@chr9:117147710..117147721,- | |||
}} | }} |
Latest revision as of 22:03, 31 July 2015
Short description: | p@chr9:117147710..117147721, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:117147710..117147721, - |
Coexpression cluster: | C654_Eosinophils_Neutrophils_Natural_CD8_CD4_CD14_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.98e-62 | 11 |
granulocyte | 3.63e-44 | 8 |
mature alpha-beta T cell | 1.46e-37 | 18 |
alpha-beta T cell | 1.46e-37 | 18 |
immature T cell | 1.46e-37 | 18 |
mature T cell | 1.46e-37 | 18 |
immature alpha-beta T cell | 1.46e-37 | 18 |
blood cell | 6.24e-32 | 11 |
T cell | 1.32e-26 | 25 |
pro-T cell | 1.32e-26 | 25 |
leukocyte | 1.02e-23 | 136 |
neutrophil | 5.23e-23 | 3 |
natural killer cell | 7.56e-23 | 3 |
pro-NK cell | 7.56e-23 | 3 |
lymphoid lineage restricted progenitor cell | 9.10e-21 | 52 |
lymphocyte | 2.49e-20 | 53 |
common lymphoid progenitor | 2.49e-20 | 53 |
hematopoietic stem cell | 1.94e-18 | 168 |
hematopoietic oligopotent progenitor cell | 1.74e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.74e-17 | 161 |
hematopoietic cell | 2.71e-17 | 177 |
eosinophil | 3.83e-16 | 2 |
nongranular leukocyte | 5.60e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 2.12e-10 | 120 |
basophil | 2.49e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 9.77e-08 | 15 |
haemolymphatic fluid | 9.77e-08 | 15 |
organism substance | 9.77e-08 | 15 |