FFCP PHASE1:Hg19::chr9:114720627..114720666,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:114720627..114720666,+ | |||
|coexpression_cluster_id=C91 | |coexpression_cluster_id=C91 | ||
|description=CAGE_peak_at_chr9:114720627..114720666,+ | |description=CAGE_peak_at_chr9:114720627..114720666,+ | ||
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|ontology_enrichment_celltype=CL:0000359!2.40e-17!32;CL:0000192!1.65e-16!42;CL:0000514!1.65e-16!42;CL:0000680!4.30e-16!57;CL:0000056!4.30e-16!57;CL:0000355!4.30e-16!57;CL:0000187!5.88e-15!54;CL:0000183!7.71e-14!59;CL:0000055!6.14e-13!180;CL:0000222!7.37e-13!119;CL:0000393!1.66e-12!60;CL:0000211!1.66e-12!60;CL:0002371!7.58e-11!591;CL:0000144!2.53e-10!625;CL:0000220!5.62e-09!246;CL:0002321!9.27e-09!248;CL:0000548!1.16e-08!679;CL:0000004!1.16e-08!679;CL:0000255!1.16e-08!679;CL:0000012!1.91e-08!682;CL:0000048!1.93e-08!430;CL:0002539!2.06e-08!10;CL:0000723!2.46e-08!436;CL:0000034!1.02e-07!444 | |ontology_enrichment_celltype=CL:0000359!2.40e-17!32;CL:0000192!1.65e-16!42;CL:0000514!1.65e-16!42;CL:0000680!4.30e-16!57;CL:0000056!4.30e-16!57;CL:0000355!4.30e-16!57;CL:0000187!5.88e-15!54;CL:0000183!7.71e-14!59;CL:0000055!6.14e-13!180;CL:0000222!7.37e-13!119;CL:0000393!1.66e-12!60;CL:0000211!1.66e-12!60;CL:0002371!7.58e-11!591;CL:0000144!2.53e-10!625;CL:0000220!5.62e-09!246;CL:0002321!9.27e-09!248;CL:0000548!1.16e-08!679;CL:0000004!1.16e-08!679;CL:0000255!1.16e-08!679;CL:0000012!1.91e-08!682;CL:0000048!1.93e-08!430;CL:0002539!2.06e-08!10;CL:0000723!2.46e-08!436;CL:0000034!1.02e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:1000306;5.00e-14;4!CL:0002547;5.00e-14;4!CL:0000359;1.92e-12;32!CL:0002589;2.71e-12;2!CL:0002592;1.74e-08;3!CL:0000192;1.67e-07;43!CL:0000048;3.33e-07;58!CL:0000723;3.35e-07;61!CL:0000342;5.60e-07;1!CL:0002565;5.60e-07;1!CL:0000569;5.95e-07;4 | |ontology_enrichment_celltype_v019=CL:1000306;5.00e-14;4!CL:0002547;5.00e-14;4!CL:0000359;1.92e-12;32!CL:0002589;2.71e-12;2!CL:0002592;1.74e-08;3!CL:0000192;1.67e-07;43!CL:0000048;3.33e-07;58!CL:0000723;3.35e-07;61!CL:0000342;5.60e-07;1!CL:0002565;5.60e-07;1!CL:0000569;5.95e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:1000306,6.39e-14,4;CL:0002547,6.39e-14,4;CL:0000359,6.90e-13,32;CL:0002589,3.84e-12,2;CL:0000192,3.22e-09,43;CL:0000514,3.22e-09,43;CL:0002592,2.11e-08,3;CL:0000680,5.49e-08,58;CL:0000056,5.49e-08,58;CL:0000355,5.49e-08,58;CL:0000569,6.32e-07,4;CL:0000011,6.32e-07,4;CL:0000187,6.78e-07,55;CL:0000342,9.73e-07,1;CL:0002565,9.73e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000514;1.67e-07;43!CL:0000011;5.95e-07;4 | |ontology_enrichment_development_v019=CL:0000514;1.67e-07;43!CL:0000011;5.95e-07;4 | ||
|ontology_enrichment_disease=DOID:2394!9.46e-16!14;DOID:120!2.35e-07!27 | |ontology_enrichment_disease=DOID:2394!9.46e-16!14;DOID:120!2.35e-07!27 | ||
|ontology_enrichment_disease_v019=DOID:2394;2.75e-19;14!DOID:120;1.39e-09;27!DOID:193;7.32e-09;29 | |ontology_enrichment_disease_v019=DOID:2394;2.75e-19;14!DOID:120;1.39e-09;27!DOID:193;7.32e-09;29 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,2.06e-19,14;DOID:120,1.21e-09,27;DOID:193,6.42e-09,29 | |||
|ontology_enrichment_uberon=UBERON:0000486!3.11e-18!82;UBERON:0001637!2.59e-17!42;UBERON:0003509!2.59e-17!42;UBERON:0004572!2.59e-17!42;UBERON:0000914!7.22e-17!83;UBERON:0002329!7.22e-17!83;UBERON:0003077!7.22e-17!83;UBERON:0003059!7.22e-17!83;UBERON:0007282!7.22e-17!83;UBERON:0009618!7.22e-17!83;UBERON:0007285!7.22e-17!83;UBERON:0004290!2.24e-16!70;UBERON:0001981!1.02e-15!60;UBERON:0007500!1.02e-15!60;UBERON:0004537!1.02e-15!60;UBERON:0006965!1.02e-15!60;UBERON:0004872!1.90e-14!84;UBERON:0001134!2.34e-14!61;UBERON:0002036!2.34e-14!61;UBERON:0003082!2.34e-14!61;UBERON:0000055!2.60e-14!69;UBERON:0002049!8.14e-14!79;UBERON:0007798!8.14e-14!79;UBERON:0002385!1.40e-13!63;UBERON:0001015!1.40e-13!63;UBERON:0000383!1.40e-13!63;UBERON:0003914!6.27e-13!118;UBERON:0004573!1.29e-12!33;UBERON:0004571!1.29e-12!33;UBERON:0004535!9.01e-12!110;UBERON:0005256!2.97e-11!143;UBERON:0001009!4.04e-11!113;UBERON:0000119!6.09e-11!312;UBERON:0000483!8.33e-11!309;UBERON:0000490!6.98e-10!138;UBERON:0002204!1.86e-08!167;UBERON:0004237!2.06e-08!10;UBERON:0004695!2.06e-08!10;UBERON:0002111!2.06e-08!10;UBERON:0004178!2.06e-08!10;UBERON:0000992!4.28e-08!13;UBERON:0000947!1.22e-07!21;UBERON:0010191!1.22e-07!21;UBERON:0002118!1.33e-07!5;UBERON:0004532!1.33e-07!5;UBERON:0001135!1.67e-07!15;UBERON:0000926!4.09e-07!448;UBERON:0004120!4.09e-07!448;UBERON:0006603!4.09e-07!448;UBERON:0002119!7.33e-07!4;UBERON:0004531!7.33e-07!4;UBERON:0002100!8.94e-07!216;UBERON:0000025!9.96e-07!194 | |ontology_enrichment_uberon=UBERON:0000486!3.11e-18!82;UBERON:0001637!2.59e-17!42;UBERON:0003509!2.59e-17!42;UBERON:0004572!2.59e-17!42;UBERON:0000914!7.22e-17!83;UBERON:0002329!7.22e-17!83;UBERON:0003077!7.22e-17!83;UBERON:0003059!7.22e-17!83;UBERON:0007282!7.22e-17!83;UBERON:0009618!7.22e-17!83;UBERON:0007285!7.22e-17!83;UBERON:0004290!2.24e-16!70;UBERON:0001981!1.02e-15!60;UBERON:0007500!1.02e-15!60;UBERON:0004537!1.02e-15!60;UBERON:0006965!1.02e-15!60;UBERON:0004872!1.90e-14!84;UBERON:0001134!2.34e-14!61;UBERON:0002036!2.34e-14!61;UBERON:0003082!2.34e-14!61;UBERON:0000055!2.60e-14!69;UBERON:0002049!8.14e-14!79;UBERON:0007798!8.14e-14!79;UBERON:0002385!1.40e-13!63;UBERON:0001015!1.40e-13!63;UBERON:0000383!1.40e-13!63;UBERON:0003914!6.27e-13!118;UBERON:0004573!1.29e-12!33;UBERON:0004571!1.29e-12!33;UBERON:0004535!9.01e-12!110;UBERON:0005256!2.97e-11!143;UBERON:0001009!4.04e-11!113;UBERON:0000119!6.09e-11!312;UBERON:0000483!8.33e-11!309;UBERON:0000490!6.98e-10!138;UBERON:0002204!1.86e-08!167;UBERON:0004237!2.06e-08!10;UBERON:0004695!2.06e-08!10;UBERON:0002111!2.06e-08!10;UBERON:0004178!2.06e-08!10;UBERON:0000992!4.28e-08!13;UBERON:0000947!1.22e-07!21;UBERON:0010191!1.22e-07!21;UBERON:0002118!1.33e-07!5;UBERON:0004532!1.33e-07!5;UBERON:0001135!1.67e-07!15;UBERON:0000926!4.09e-07!448;UBERON:0004120!4.09e-07!448;UBERON:0006603!4.09e-07!448;UBERON:0002119!7.33e-07!4;UBERON:0004531!7.33e-07!4;UBERON:0002100!8.94e-07!216;UBERON:0000025!9.96e-07!194 | ||
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| ||
|short_description=p@chr9:114720627..114720666,+ | |short_description=p@chr9:114720627..114720666,+ | ||
}} | }} |
Latest revision as of 21:49, 31 July 2015
Short description: | p@chr9:114720627..114720666, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:114720627..114720666, + |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 6.39e-14 | 4 |
fibroblast of the aortic adventitia | 6.39e-14 | 4 |
vascular associated smooth muscle cell | 6.90e-13 | 32 |
smooth muscle cell of the brachiocephalic vasculature | 3.84e-12 | 2 |
smooth muscle cell | 3.22e-09 | 43 |
smooth muscle myoblast | 3.22e-09 | 43 |
smooth muscle cell of the coronary artery | 2.11e-08 | 3 |
muscle precursor cell | 5.49e-08 | 58 |
myoblast | 5.49e-08 | 58 |
multi-potent skeletal muscle stem cell | 5.49e-08 | 58 |
cardiac mesenchymal cell | 6.32e-07 | 4 |
migratory trunk neural crest cell | 6.32e-07 | 4 |
muscle cell | 6.78e-07 | 55 |
pigment cell (sensu Vertebrata) | 9.73e-07 | 1 |
iris pigment epithelial cell | 9.73e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.06e-19 | 14 |
female reproductive organ cancer | 1.21e-09 | 27 |
reproductive organ cancer | 6.42e-09 | 29 |