FFCP PHASE1:Hg19::chr8:90556171..90556173,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:90556171..90556173,+ | |||
|coexpression_cluster_id=C4086 | |||
|description=CAGE_peak_at_chr8:90556171..90556173,+ | |description=CAGE_peak_at_chr8:90556171..90556173,+ | ||
|id=chr8:90556171..90556173,+ | |id=chr8:90556171..90556173,+ | ||
|ontology_enrichment_celltype=CL:0000359!1.62e-41!32;CL:0000192!1.12e-30!42;CL:0000514!1.12e-30!42;CL:0000187!5.69e-23!54;CL:0000680!1.49e-21!57;CL:0000056!1.49e-21!57;CL:0000355!1.49e-21!57;CL:0000183!1.09e-20!59;CL:0002594!1.23e-20!4;CL:0000393!2.81e-20!60;CL:0000211!2.81e-20!60;CL:0002595!2.04e-16!5;CL:0000055!7.81e-15!180;CL:1000306!1.89e-11!4;CL:0002547!1.89e-11!4;CL:0002596!3.01e-11!2;CL:0002593!4.06e-11!2;CL:0002589!4.96e-11!2;CL:0000222!1.03e-10!119;CL:0000220!2.11e-08!246;CL:0002321!2.75e-08!248;CL:0002539!3.17e-08!10;CL:0002166!1.99e-07!3 | |ontology_enrichment_celltype=CL:0000359!1.62e-41!32;CL:0000192!1.12e-30!42;CL:0000514!1.12e-30!42;CL:0000187!5.69e-23!54;CL:0000680!1.49e-21!57;CL:0000056!1.49e-21!57;CL:0000355!1.49e-21!57;CL:0000183!1.09e-20!59;CL:0002594!1.23e-20!4;CL:0000393!2.81e-20!60;CL:0000211!2.81e-20!60;CL:0002595!2.04e-16!5;CL:0000055!7.81e-15!180;CL:1000306!1.89e-11!4;CL:0002547!1.89e-11!4;CL:0002596!3.01e-11!2;CL:0002593!4.06e-11!2;CL:0002589!4.96e-11!2;CL:0000222!1.03e-10!119;CL:0000220!2.11e-08!246;CL:0002321!2.75e-08!248;CL:0002539!3.17e-08!10;CL:0002166!1.99e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000359;4.40e-48;32!CL:0002594;9.93e-41;4!CL:0000192;3.59e-30;43!CL:0000187;9.10e-18;55!CL:0002539;9.04e-17;10!CL:0000393;3.27e-16;61!CL:0000211;3.27e-16;61!CL:0002595;1.13e-15;5!CL:0002596;1.57e-10;2!CL:0002593;1.72e-10;2!CL:0002589;2.99e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.36e-55,32;CL:0000192,4.16e-41,43;CL:0000514,4.16e-41,43;CL:0002594,1.31e-40,4;CL:0000187,4.73e-32,55;CL:0000680,2.27e-30,58;CL:0000056,2.27e-30,58;CL:0000355,2.27e-30,58;CL:0000393,7.43e-29,61;CL:0000211,7.43e-29,61;CL:0002539,8.57e-17,10;CL:0002595,1.13e-15,5;CL:0000222,2.83e-14,121;CL:0002596,1.57e-10,2;CL:0002593,1.72e-10,2;CL:0002589,2.72e-10,2 | |||
|ontology_enrichment_development_v019=CL:0000514;3.59e-30;43!CL:0000355;6.35e-19;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!6.56e-43!42;UBERON:0003509!6.56e-43!42;UBERON:0004572!6.56e-43!42;UBERON:0004573!5.89e-35!33;UBERON:0004571!5.89e-35!33;UBERON:0001981!1.30e-28!60;UBERON:0007500!1.30e-28!60;UBERON:0004537!1.30e-28!60;UBERON:0006965!1.30e-28!60;UBERON:0000055!2.89e-24!69;UBERON:0004872!3.07e-21!84;UBERON:0001310!1.23e-20!4;UBERON:0002049!1.34e-20!79;UBERON:0007798!1.34e-20!79;UBERON:0001134!7.02e-20!61;UBERON:0002036!7.02e-20!61;UBERON:0003082!7.02e-20!61;UBERON:0002385!4.01e-19!63;UBERON:0001015!4.01e-19!63;UBERON:0000383!4.01e-19!63;UBERON:0000914!2.45e-17!83;UBERON:0002329!2.45e-17!83;UBERON:0003077!2.45e-17!83;UBERON:0003059!2.45e-17!83;UBERON:0007282!2.45e-17!83;UBERON:0009618!2.45e-17!83;UBERON:0007285!2.45e-17!83;UBERON:0003914!6.80e-17!118;UBERON:0004290!8.12e-17!70;UBERON:0003834!2.04e-16!5;UBERON:0001533!2.04e-16!5;UBERON:0004535!4.59e-15!110;UBERON:0001009!1.55e-14!113;UBERON:0000486!8.75e-14!82;UBERON:0005256!1.11e-11!143;UBERON:0000415!1.89e-11!4;UBERON:0007240!1.89e-11!4;UBERON:0005742!1.89e-11!4;UBERON:0005734!1.89e-11!4;UBERON:0004664!1.89e-11!4;UBERON:0004663!1.89e-11!4;UBERON:0005396!3.01e-11!2;UBERON:0002456!4.06e-11!2;UBERON:0001529!4.96e-11!2;UBERON:0007204!4.96e-11!2;UBERON:0000947!1.25e-10!21;UBERON:0010191!1.25e-10!21;UBERON:0003513!2.72e-10!8;UBERON:0002100!1.48e-08!216;UBERON:0004237!3.17e-08!10;UBERON:0004695!3.17e-08!10;UBERON:0002111!3.17e-08!10;UBERON:0004178!3.17e-08!10;UBERON:0000025!3.51e-08!194;UBERON:0003104!4.29e-08!238;UBERON:0009142!4.29e-08!238;UBERON:0004111!6.98e-08!241;UBERON:0003081!1.22e-07!216;UBERON:0000490!1.28e-07!138;UBERON:0000475!2.04e-07!365;UBERON:0002204!2.88e-07!167 | |ontology_enrichment_uberon=UBERON:0001637!6.56e-43!42;UBERON:0003509!6.56e-43!42;UBERON:0004572!6.56e-43!42;UBERON:0004573!5.89e-35!33;UBERON:0004571!5.89e-35!33;UBERON:0001981!1.30e-28!60;UBERON:0007500!1.30e-28!60;UBERON:0004537!1.30e-28!60;UBERON:0006965!1.30e-28!60;UBERON:0000055!2.89e-24!69;UBERON:0004872!3.07e-21!84;UBERON:0001310!1.23e-20!4;UBERON:0002049!1.34e-20!79;UBERON:0007798!1.34e-20!79;UBERON:0001134!7.02e-20!61;UBERON:0002036!7.02e-20!61;UBERON:0003082!7.02e-20!61;UBERON:0002385!4.01e-19!63;UBERON:0001015!4.01e-19!63;UBERON:0000383!4.01e-19!63;UBERON:0000914!2.45e-17!83;UBERON:0002329!2.45e-17!83;UBERON:0003077!2.45e-17!83;UBERON:0003059!2.45e-17!83;UBERON:0007282!2.45e-17!83;UBERON:0009618!2.45e-17!83;UBERON:0007285!2.45e-17!83;UBERON:0003914!6.80e-17!118;UBERON:0004290!8.12e-17!70;UBERON:0003834!2.04e-16!5;UBERON:0001533!2.04e-16!5;UBERON:0004535!4.59e-15!110;UBERON:0001009!1.55e-14!113;UBERON:0000486!8.75e-14!82;UBERON:0005256!1.11e-11!143;UBERON:0000415!1.89e-11!4;UBERON:0007240!1.89e-11!4;UBERON:0005742!1.89e-11!4;UBERON:0005734!1.89e-11!4;UBERON:0004664!1.89e-11!4;UBERON:0004663!1.89e-11!4;UBERON:0005396!3.01e-11!2;UBERON:0002456!4.06e-11!2;UBERON:0001529!4.96e-11!2;UBERON:0007204!4.96e-11!2;UBERON:0000947!1.25e-10!21;UBERON:0010191!1.25e-10!21;UBERON:0003513!2.72e-10!8;UBERON:0002100!1.48e-08!216;UBERON:0004237!3.17e-08!10;UBERON:0004695!3.17e-08!10;UBERON:0002111!3.17e-08!10;UBERON:0004178!3.17e-08!10;UBERON:0000025!3.51e-08!194;UBERON:0003104!4.29e-08!238;UBERON:0009142!4.29e-08!238;UBERON:0004111!6.98e-08!241;UBERON:0003081!1.22e-07!216;UBERON:0000490!1.28e-07!138;UBERON:0000475!2.04e-07!365;UBERON:0002204!2.88e-07!167 | ||
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|short_description=p@chr8:90556171..90556173,+ | |short_description=p@chr8:90556171..90556173,+ | ||
}} | }} |
Latest revision as of 20:24, 31 July 2015
Short description: | p@chr8:90556171..90556173, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:90556171..90556173, + |
Coexpression cluster: | C4086_Smooth_Mesothelial_seminal_Fibroblast_Alveolar_Melanocyte_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.36e-55 | 32 |
smooth muscle cell | 4.16e-41 | 43 |
smooth muscle myoblast | 4.16e-41 | 43 |
smooth muscle cell of the umbilical artery | 1.31e-40 | 4 |
muscle cell | 4.73e-32 | 55 |
muscle precursor cell | 2.27e-30 | 58 |
myoblast | 2.27e-30 | 58 |
multi-potent skeletal muscle stem cell | 2.27e-30 | 58 |
electrically responsive cell | 7.43e-29 | 61 |
electrically active cell | 7.43e-29 | 61 |
aortic smooth muscle cell | 8.57e-17 | 10 |
smooth muscle cell of the subclavian artery | 1.13e-15 | 5 |
mesodermal cell | 2.83e-14 | 121 |
smooth muscle cell of the carotid artery | 1.57e-10 | 2 |
smooth muscle cell of the internal thoracic artery | 1.72e-10 | 2 |
smooth muscle cell of the brachiocephalic vasculature | 2.72e-10 | 2 |