FFCP PHASE1:Hg19::chr8:80577410..80577417,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr8:80577410..80577417,+ | |||
|coexpression_cluster_id=C3749 | |||
|description=CAGE_peak_at_chr8:80577410..80577417,+ | |||
|id=chr8:80577410..80577417,+ | |||
|ontology_enrichment_celltype=CL:0002617!2.24e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.85e-14;6!CL:0000404;2.85e-14;6!CL:0002615;7.50e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.85e-14,6;CL:0000031,2.85e-14,6;CL:0000404,2.85e-14,6;CL:0000047,5.98e-11,8;CL:0002615,8.29e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000031;2.85e-14;6!UBERON:0006215;7.50e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.13e-47!57;UBERON:0005068!9.13e-47!57;UBERON:0006241!9.13e-47!57;UBERON:0007135!9.13e-47!57;UBERON:0002616!6.01e-45!59;UBERON:0001017!6.08e-43!82;UBERON:0000955!1.05e-42!69;UBERON:0006238!1.05e-42!69;UBERON:0005743!1.38e-40!86;UBERON:0000073!2.18e-38!94;UBERON:0001016!2.18e-38!94;UBERON:0002780!3.78e-38!41;UBERON:0001890!3.78e-38!41;UBERON:0006240!3.78e-38!41;UBERON:0003080!4.03e-37!42;UBERON:0002619!1.00e-35!22;UBERON:0002020!2.94e-35!34;UBERON:0003528!2.94e-35!34;UBERON:0001893!6.65e-35!34;UBERON:0001950!9.61e-35!20;UBERON:0001869!1.08e-33!32;UBERON:0002791!1.50e-32!33;UBERON:0000956!3.89e-31!25;UBERON:0000203!3.89e-31!25;UBERON:0003075!7.41e-31!86;UBERON:0007284!7.41e-31!86;UBERON:0002346!3.75e-29!90;UBERON:0003056!6.43e-24!61;UBERON:0000033!2.18e-22!123;UBERON:0004121!6.43e-22!169;UBERON:0000924!3.32e-21!173;UBERON:0006601!3.32e-21!173;UBERON:0000153!5.50e-21!129;UBERON:0007811!5.50e-21!129;UBERON:0000200!2.14e-20!6;UBERON:0007023!1.48e-19!115;UBERON:0001871!1.73e-15!7;UBERON:0004733!1.53e-13!12;UBERON:0002028!1.53e-13!12;UBERON:0007277!1.53e-13!12;UBERON:0004732!2.02e-12!13;UBERON:0001872!1.48e-11!5;UBERON:0000025!2.28e-11!194;UBERON:0002771!4.14e-11!3;UBERON:0000988!7.47e-11!3;UBERON:0003076!1.25e-10!15;UBERON:0003057!1.25e-10!15;UBERON:0002298!1.63e-10!8;UBERON:0000475!7.03e-10!365;UBERON:0002680!9.31e-10!9;UBERON:0001895!9.31e-10!9;UBERON:0010092!9.31e-10!9;UBERON:0001870!1.50e-08!2;UBERON:0001897!5.88e-08!2;UBERON:0002148!6.77e-08!2;UBERON:0009662!6.77e-08!2;UBERON:0000064!9.26e-08!219;UBERON:0004111!1.07e-07!241;UBERON:0002021!5.70e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.06e-23;20!UBERON:0002619;1.15e-21;22!UBERON:0000956;3.41e-19;25!UBERON:0000203;3.41e-19;25!UBERON:0002791;1.65e-14;32!UBERON:0001869;2.24e-14;32!UBERON:0000200;2.85e-14;6!UBERON:0003528;5.98e-14;34!UBERON:0002020;5.98e-14;34!UBERON:0000955;8.98e-13;68!UBERON:0001893;2.24e-12;34!UBERON:0001871;2.82e-12;6!UBERON:0002771;2.60e-11;2!UBERON:0002702;2.60e-11;2!UBERON:0000073;7.31e-11;53!UBERON:0002616;7.31e-11;53!UBERON:0001016;7.25e-09;83!UBERON:0002780;2.88e-08;41!UBERON:0001890;2.88e-08;41!UBERON:0001017;4.52e-08;75!UBERON:0001870;5.73e-08;3!UBERON:0000922;8.66e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,9.85e-24,20;UBERON:0002619,1.08e-21,22;UBERON:0000956,3.22e-19,25;UBERON:0000203,3.22e-19,25;UBERON:0001017,5.63e-19,81;UBERON:0001016,4.37e-17,89;UBERON:0002791,3.47e-15,32;UBERON:0001869,3.47e-15,32;UBERON:0003528,2.50e-14,34;UBERON:0002020,2.50e-14,34;UBERON:0001893,2.50e-14,34;UBERON:0000200,2.85e-14,6;UBERON:0000955,1.09e-13,68;UBERON:0006238,1.09e-13,68;UBERON:0000073,3.80e-13,53;UBERON:0002616,3.80e-13,53;UBERON:0001049,1.88e-12,56;UBERON:0005068,1.88e-12,56;UBERON:0006241,1.88e-12,56;UBERON:0007135,1.88e-12,56;UBERON:0001871,2.98e-12,6;UBERON:0002780,5.76e-12,41;UBERON:0001890,5.76e-12,41;UBERON:0003080,5.76e-12,41;UBERON:0006240,5.76e-12,41;UBERON:0002702,2.23e-11,2;UBERON:0002771,3.02e-11,2;UBERON:0004121,8.07e-09,171;UBERON:0000924,8.07e-09,171;UBERON:0006601,8.07e-09,171;UBERON:0003075,1.61e-08,82;UBERON:0007284,1.61e-08,82;UBERON:0003056,3.90e-08,61;UBERON:0002346,4.04e-08,86;UBERON:0001870,5.18e-08,3 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.422863212287913,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772921620136887,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31986643833309,0.167516265334349,2.55175500661265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,3.99227596002388,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0.995213339381022,1.18219047581419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,1.22429104652196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,2.07444650333337,0.1251909307065,0.573409195690071,0,0.0620964029413835,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0.205116364240755,1.76450187355203,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.19024743058172,3.28184885410932,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.131545547125698,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0.872701380680755,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr8:80577410..80577417,+ | |||
}} |
Latest revision as of 20:00, 31 July 2015
Short description: | p@chr8:80577410..80577417, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:80577410..80577417, + |
Coexpression cluster: | C3749_brain_Neurons_parietal_occipital_temporal_cerebellum_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.85e-14 | 6 |
neuroblast | 2.85e-14 | 6 |
electrically signaling cell | 2.85e-14 | 6 |
neuronal stem cell | 5.98e-11 | 8 |
adipocyte of omentum tissue | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
neocortex | 9.85e-24 | 20 |
regional part of cerebral cortex | 1.08e-21 | 22 |
cerebral cortex | 3.22e-19 | 25 |
pallium | 3.22e-19 | 25 |
central nervous system | 5.63e-19 | 81 |
nervous system | 4.37e-17 | 89 |
regional part of telencephalon | 3.47e-15 | 32 |
cerebral hemisphere | 3.47e-15 | 32 |
brain grey matter | 2.50e-14 | 34 |
gray matter | 2.50e-14 | 34 |
telencephalon | 2.50e-14 | 34 |
gyrus | 2.85e-14 | 6 |
brain | 1.09e-13 | 68 |
future brain | 1.09e-13 | 68 |
regional part of nervous system | 3.80e-13 | 53 |
regional part of brain | 3.80e-13 | 53 |
neural tube | 1.88e-12 | 56 |
neural rod | 1.88e-12 | 56 |
future spinal cord | 1.88e-12 | 56 |
neural keel | 1.88e-12 | 56 |
temporal lobe | 2.98e-12 | 6 |
regional part of forebrain | 5.76e-12 | 41 |
forebrain | 5.76e-12 | 41 |
anterior neural tube | 5.76e-12 | 41 |
future forebrain | 5.76e-12 | 41 |
middle frontal gyrus | 2.23e-11 | 2 |
middle temporal gyrus | 3.02e-11 | 2 |
ectoderm-derived structure | 8.07e-09 | 171 |
ectoderm | 8.07e-09 | 171 |
presumptive ectoderm | 8.07e-09 | 171 |
neural plate | 1.61e-08 | 82 |
presumptive neural plate | 1.61e-08 | 82 |
pre-chordal neural plate | 3.90e-08 | 61 |
neurectoderm | 4.04e-08 | 86 |
frontal cortex | 5.18e-08 | 3 |