FFCP PHASE1:Hg19::chr8:72504214..72504256,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=3bp_to_ENST00000518177_5end | |||
|cluster_id=chr8:72504214..72504256,- | |||
|coexpression_cluster_id=C77 | |||
|description=CAGE_peak_1_at_ENST00000518177_5end | |||
|id=chr8:72504214..72504256,- | |||
|ontology_enrichment_celltype=CL:0002195!3.23e-16!2;CL:0002571!3.23e-16!2;CL:0000062!8.04e-12!11;CL:0000375!8.04e-12!11;CL:0000335!8.04e-12!11;CL:0000035!1.16e-09!20;CL:0002319!5.97e-07!25;CL:0000133!6.09e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000062;4.03e-29;9!CL:0000322;8.57e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,5.65e-24,11;CL:0000375,5.65e-24,11;CL:0000335,5.65e-24,11;CL:0000322,8.17e-11,3 | |||
|ontology_enrichment_development_v019=CL:0000335;5.43e-24;11 | |||
|ontology_enrichment_disease=DOID:2355!2.82e-09!1;DOID:5662!3.05e-09!1;DOID:0060085!5.75e-09!1;DOID:3165!5.75e-09!1;DOID:0060121!5.75e-09!1;DOID:2438!5.75e-09!1;DOID:4418!5.75e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:3910;1.66e-15;2!DOID:154;2.37e-15;2!DOID:4236;2.37e-15;2!DOID:1909;2.37e-15;2!DOID:3908;5.54e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,1.54e-15,2;DOID:154,2.05e-15,2;DOID:4236,2.05e-15,2;DOID:1909,2.37e-15,2;DOID:3908,5.38e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001282!9.91e-09!1;UBERON:0009842!9.91e-09!1;UBERON:0003704!9.91e-09!1;UBERON:0001171!9.91e-09!1;UBERON:0001172!9.91e-09!1;UBERON:0007499!1.46e-07!25;UBERON:0009856!2.91e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.66e-15;2!UBERON:0002173;1.66e-15;2!UBERON:0002186;1.66e-15;2!UBERON:0001474;5.53e-15;18!UBERON:0004821;8.57e-11;3!UBERON:0007499;8.57e-11;3!UBERON:0003215;8.57e-11;3!UBERON:0010368;8.57e-11;3!UBERON:0009911;8.57e-11;3!UBERON:0002299;8.57e-11;3!UBERON:0006524;8.57e-11;3!UBERON:0008874;8.57e-11;3!UBERON:0002169;8.57e-11;3!UBERON:0004894;8.57e-11;3!UBERON:0004765;1.34e-10;26!UBERON:0009856;2.03e-08;4!UBERON:0001434;6.52e-08;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.54e-15,2;UBERON:0002173,1.54e-15,2;UBERON:0002186,1.54e-15,2;UBERON:0004821,8.17e-11,3;UBERON:0003215,8.17e-11,3;UBERON:0010368,8.17e-11,3;UBERON:0009911,8.17e-11,3;UBERON:0002299,8.17e-11,3;UBERON:0006524,8.17e-11,3;UBERON:0008874,8.17e-11,3;UBERON:0002169,8.17e-11,3;UBERON:0004894,8.17e-11,3 | |||
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|short_description=p1@ENST00000518177 | |||
}} | }} |
Latest revision as of 19:45, 31 July 2015
Short description: | p1@ENST00000518177 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000518177_5end |
Coexpression cluster: | C77_Saos2_osteosarcoma_Neutrophils_Natural_Chondrocyte_Basophils_CD8 |
Association with transcript: | 3bp_to_ENST00000518177_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 5.65e-24 | 11 |
osteoprogenitor cell | 5.65e-24 | 11 |
mesenchyme condensation cell | 5.65e-24 | 11 |
pneumocyte | 8.17e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.54e-15 | 2 |
alveolar duct | 1.54e-15 | 2 |
bronchiole | 1.54e-15 | 2 |
pulmonary alveolus epithelium | 8.17e-11 | 3 |
alveolus | 8.17e-11 | 3 |
pulmonary lobule | 8.17e-11 | 3 |
lobule | 8.17e-11 | 3 |
alveolus of lung | 8.17e-11 | 3 |
alveolar system | 8.17e-11 | 3 |
pulmonary acinus | 8.17e-11 | 3 |
alveolar sac | 8.17e-11 | 3 |
alveolar wall | 8.17e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.54e-15 | 2 |
mixed cell type cancer | 2.05e-15 | 2 |
carcinosarcoma | 2.05e-15 | 2 |
melanoma | 2.37e-15 | 2 |
non-small cell lung carcinoma | 5.38e-07 | 5 |