FFCP PHASE1:Hg19::chr8:6518106..6518122,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:6518106..6518122,- | |||
|coexpression_cluster_id=C1400 | |||
|description=CAGE_peak_at_chr8:6518106..6518122,- | |description=CAGE_peak_at_chr8:6518106..6518122,- | ||
|id=chr8:6518106..6518122,- | |id=chr8:6518106..6518122,- | ||
|ontology_enrichment_celltype=CL:0000243!3.62e-13!15;CL:0000125!3.62e-13!15;CL:0000030!3.62e-13!15;CL:0000339!3.62e-13!15;CL:0002603!4.84e-13!3;CL:0000095!9.05e-12!17;CL:0000123!9.05e-12!17;CL:0002319!1.09e-11!25;CL:0000133!9.85e-11!59;CL:0002379!2.28e-10!1;CL:0000569!6.84e-10!4;CL:0000011!6.84e-10!4;CL:0000333!1.57e-09!41;CL:0002494!3.33e-09!16;CL:0000221!9.20e-09!71;CL:0002548!6.11e-07!6 | |ontology_enrichment_celltype=CL:0000243!3.62e-13!15;CL:0000125!3.62e-13!15;CL:0000030!3.62e-13!15;CL:0000339!3.62e-13!15;CL:0002603!4.84e-13!3;CL:0000095!9.05e-12!17;CL:0000123!9.05e-12!17;CL:0002319!1.09e-11!25;CL:0000133!9.85e-11!59;CL:0002379!2.28e-10!1;CL:0000569!6.84e-10!4;CL:0000011!6.84e-10!4;CL:0000333!1.57e-09!41;CL:0002494!3.33e-09!16;CL:0000221!9.20e-09!71;CL:0002548!6.11e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000047;8.82e-14;2!CL:0002603;1.60e-09;3!CL:0002623;1.60e-09;3!CL:0002319;5.58e-09;25!CL:0000243;8.22e-07;15!CL:0000125;8.22e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,1.41e-09,3;CL:0002603,1.67e-09,3;CL:0002319,5.74e-09,25;CL:0000243,8.34e-07,15;CL:0000125,8.34e-07,15;CL:0000030,8.34e-07,15;CL:0000339,8.34e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000339;8.22e-07;15 | |||
|ontology_enrichment_disease=DOID:5662!7.40e-11!1;DOID:3620!2.28e-10!1;DOID:3565!2.28e-10!1;DOID:3093!2.27e-07!11 | |||
|ontology_enrichment_disease_v019=DOID:5662;2.78e-26;1!DOID:154;8.82e-14;2!DOID:4236;8.82e-14;2 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,2.78e-26,1;DOID:154,8.28e-14,2;DOID:4236,8.28e-14,2 | |||
|ontology_enrichment_uberon=UBERON:0002037!5.93e-07!6;UBERON:0006215!5.93e-07!6 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr8:6518106..6518122,- | |short_description=p@chr8:6518106..6518122,- | ||
}} | }} |
Latest revision as of 19:22, 31 July 2015
Short description: | p@chr8:6518106..6518122, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:6518106..6518122, - |
Coexpression cluster: | C1400_glioma_Fibroblast_pleomorphic_mixed_Preadipocyte_Neural_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 1.41e-09 | 3 |
astrocyte of the cerebellum | 1.67e-09 | 3 |
neural cell | 5.74e-09 | 25 |
glial cell (sensu Vertebrata) | 8.34e-07 | 15 |
glial cell | 8.34e-07 | 15 |
glioblast | 8.34e-07 | 15 |
glioblast (sensu Vertebrata) | 8.34e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 2.78e-26 | 1 |
mixed cell type cancer | 8.28e-14 | 2 |
carcinosarcoma | 8.28e-14 | 2 |