FFCP PHASE1:Hg19::chr8:62509751..62509755,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr8:62509751..62509755,- | |||
|description=CAGE_peak_at_chr8:62509751..62509755,- | |||
|id=chr8:62509751..62509755,- | |||
|ontology_enrichment_celltype=CL:0000860!3.36e-13!45;CL:0002057!5.69e-13!42;CL:0002194!2.00e-12!63;CL:0000576!2.00e-12!63;CL:0000040!2.00e-12!63;CL:0000559!2.00e-12!63;CL:0002009!1.19e-11!65;CL:0000839!1.20e-10!70;CL:0000557!2.53e-10!71;CL:0000766!7.55e-09!76;CL:0000763!9.42e-07!112;CL:0000049!9.42e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.17e-39;33!CL:0002057;3.17e-39;33!CL:0000473;9.69e-29;39!CL:0000234;9.69e-29;39!CL:0000576;9.58e-22;48!CL:0002379;2.07e-10;1!CL:0000766;1.53e-09;69!CL:0000763;4.52e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.20e-35,42;CL:0002057,8.20e-35,42;CL:0000473,3.32e-30,48;CL:0000234,3.32e-30,48;CL:0002194,9.48e-24,59;CL:0000576,9.48e-24,59;CL:0000040,9.48e-24,59;CL:0000559,9.48e-24,59;CL:0002009,6.47e-23,61;CL:0000839,4.76e-21,66;CL:0000557,1.04e-20,67;CL:0000766,3.82e-19,72;CL:0000763,3.81e-14,108;CL:0000049,3.81e-14,108;CL:0002087,2.99e-11,115;CL:0002031,1.07e-10,120;CL:0002379,1.57e-10,1;CL:0000738,3.42e-09,136;CL:0002032,9.57e-09,161;CL:0000837,9.57e-09,161;CL:0000037,2.76e-08,168;CL:0000988,9.57e-08,177 | |||
|ontology_enrichment_development_v019=CL:0002057;8.27e-30;42!CL:0000049;5.30e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;2.07e-10;1!DOID:3565;2.07e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,1.57e-10,1;DOID:3565,1.57e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.51e-11!80;UBERON:0001474!1.40e-09!86;UBERON:0002405!1.72e-09!115;UBERON:0002390!1.75e-08!102;UBERON:0003061!1.75e-08!102;UBERON:0004765!1.11e-07!101;UBERON:0001434!1.11e-07!101;UBERON:0002193!1.20e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;2.07e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.14e-21,76;UBERON:0001474,2.49e-19,82;UBERON:0004765,1.99e-17,90;UBERON:0002405,8.49e-17,93;UBERON:0002390,7.84e-16,98;UBERON:0003061,7.84e-16,98;UBERON:0001434,1.80e-15,100;UBERON:0002193,3.64e-14,108;UBERON:0007195,3.29e-10,1;UBERON:0002204,8.67e-10,167;UBERON:0003081,1.31e-07,203 | |||
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| |||
|short_description=p@chr8:62509751..62509755,- | |||
}} |
Latest revision as of 19:15, 31 July 2015
Short description: | p@chr8:62509751..62509755, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:62509751..62509755, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.20e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.20e-35 | 42 |
defensive cell | 3.32e-30 | 48 |
phagocyte | 3.32e-30 | 48 |
monopoietic cell | 9.48e-24 | 59 |
monocyte | 9.48e-24 | 59 |
monoblast | 9.48e-24 | 59 |
promonocyte | 9.48e-24 | 59 |
macrophage dendritic cell progenitor | 6.47e-23 | 61 |
myeloid lineage restricted progenitor cell | 4.76e-21 | 66 |
granulocyte monocyte progenitor cell | 1.04e-20 | 67 |
myeloid leukocyte | 3.82e-19 | 72 |
myeloid cell | 3.81e-14 | 108 |
common myeloid progenitor | 3.81e-14 | 108 |
nongranular leukocyte | 2.99e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 1.07e-10 | 120 |
meningothelial cell | 1.57e-10 | 1 |
leukocyte | 3.42e-09 | 136 |
hematopoietic oligopotent progenitor cell | 9.57e-09 | 161 |
hematopoietic multipotent progenitor cell | 9.57e-09 | 161 |
hematopoietic stem cell | 2.76e-08 | 168 |
hematopoietic cell | 9.57e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.14e-21 | 76 |
bone element | 2.49e-19 | 82 |
skeletal element | 1.99e-17 | 90 |
immune system | 8.49e-17 | 93 |
hematopoietic system | 7.84e-16 | 98 |
blood island | 7.84e-16 | 98 |
skeletal system | 1.80e-15 | 100 |
hemolymphoid system | 3.64e-14 | 108 |
stroma of bone marrow | 3.29e-10 | 1 |
musculoskeletal system | 8.67e-10 | 167 |
lateral plate mesoderm | 1.31e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 1.57e-10 | 1 |
meningioma | 1.57e-10 | 1 |