FFCP PHASE1:Hg19::chr8:42036539..42036561,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:42036539..42036561,- | |||
|coexpression_cluster_id=C471 | |||
|description=CAGE_peak_at_chr8:42036539..42036561,- | |description=CAGE_peak_at_chr8:42036539..42036561,- | ||
|id=chr8:42036539..42036561,- | |id=chr8:42036539..42036561,- | ||
|ontology_enrichment_celltype=CL:0000192!1.32e-12!42;CL:0000514!1.32e-12!42;CL:0000680!1.35e-12!57;CL:0000056!1.35e-12!57;CL:0000355!1.35e-12!57;CL:0000183!1.36e-12!59;CL:0000055!4.58e-12!180;CL:0000187!6.04e-11!54;CL:0000393!8.90e-10!60;CL:0000211!8.90e-10!60;CL:0000359!1.93e-09!32;CL:0000222!2.15e-09!119;CL:1000449!1.52e-07!16;CL:1000507!1.63e-07!12;CL:1000494!1.63e-07!12;CL:0002681!5.41e-07!13;CL:0002584!5.41e-07!13 | |ontology_enrichment_celltype=CL:0000192!1.32e-12!42;CL:0000514!1.32e-12!42;CL:0000680!1.35e-12!57;CL:0000056!1.35e-12!57;CL:0000355!1.35e-12!57;CL:0000183!1.36e-12!59;CL:0000055!4.58e-12!180;CL:0000187!6.04e-11!54;CL:0000393!8.90e-10!60;CL:0000211!8.90e-10!60;CL:0000359!1.93e-09!32;CL:0000222!2.15e-09!119;CL:1000449!1.52e-07!16;CL:1000507!1.63e-07!12;CL:1000494!1.63e-07!12;CL:0002681!5.41e-07!13;CL:0002584!5.41e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002595;2.24e-16;5!CL:0000359;4.08e-13;32!CL:0002593;3.24e-11;2!CL:0000192;8.47e-11;43!CL:0002539;7.63e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,2.12e-16,5;CL:0000192,8.61e-14,43;CL:0000514,8.61e-14,43;CL:0000359,2.56e-13,32;CL:0000680,2.66e-11,58;CL:0000056,2.66e-11,58;CL:0000355,2.66e-11,58;CL:0002593,3.50e-11,2;CL:0000187,3.00e-10,55;CL:0000393,5.25e-09,61;CL:0000211,5.25e-09,61;CL:0002539,9.26e-08,10 | |||
|ontology_enrichment_development_v019=CL:0000514;8.47e-11;43!CL:0000355;8.65e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!3.90e-08!14 | |ontology_enrichment_disease=DOID:2394!3.90e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:0060084;1.98e-16;3!DOID:127;1.98e-16;3!DOID:0060072;1.94e-12;4!DOID:2394;5.61e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.99e-16,3;DOID:127,1.99e-16,3;DOID:0060072,1.94e-12,4;DOID:2394,4.85e-12,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0003834;2.24e-16;5!UBERON:0001533;2.24e-16;5!UBERON:0004573;1.76e-13;33!UBERON:0004571;1.76e-13;33!UBERON:0003513;1.00e-11;7!UBERON:0002456;3.24e-11;2!UBERON:0001637;3.51e-11;42!UBERON:0003509;3.51e-11;42!UBERON:0004572;3.51e-11;42!UBERON:0004237;7.63e-08;10!UBERON:0004695;7.63e-08;10!UBERON:0002111;7.63e-08;10!UBERON:0004178;7.63e-08;10!UBERON:0000947;8.14e-08;21!UBERON:0010191;8.14e-08;21!UBERON:0001135;9.44e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,2.12e-16,5;UBERON:0001533,2.12e-16,5;UBERON:0004573,1.08e-15,33;UBERON:0004571,1.08e-15,33;UBERON:0001637,2.73e-14,42;UBERON:0003509,2.73e-14,42;UBERON:0004572,2.73e-14,42;UBERON:0003513,9.65e-12,7;UBERON:0002456,3.50e-11,2;UBERON:0001134,2.13e-10,62;UBERON:0002036,2.13e-10,62;UBERON:0003082,2.13e-10,62;UBERON:0002385,5.45e-10,64;UBERON:0001015,5.45e-10,64;UBERON:0000383,5.45e-10,64;UBERON:0007500,1.82e-09,59;UBERON:0001981,1.82e-09,59;UBERON:0004537,1.82e-09,59;UBERON:0006965,1.82e-09,59;UBERON:0000055,2.22e-09,68;UBERON:0002329,9.57e-09,71;UBERON:0003059,9.57e-09,71;UBERON:0007282,9.57e-09,71;UBERON:0004290,9.57e-09,71;UBERON:0009618,9.57e-09,71;UBERON:0003077,1.38e-08,72;UBERON:0007285,1.38e-08,72;UBERON:0007524,1.96e-08,73;UBERON:0000486,2.26e-08,83;UBERON:0002049,7.70e-08,78;UBERON:0007798,7.70e-08,78;UBERON:0000947,9.03e-08,21;UBERON:0010191,9.03e-08,21;UBERON:0004237,9.26e-08,10;UBERON:0004695,9.26e-08,10;UBERON:0002111,9.26e-08,10;UBERON:0004178,9.26e-08,10;UBERON:0007503,9.97e-08,78;UBERON:0001135,1.00e-07,15;UBERON:0004872,3.23e-07,83;UBERON:0003914,4.54e-07,117 | |||
|phase1_expression=0,0.214100523890983,0.422863212287913,0,0.893922188854576,0,0,0,0,0.245733936501509,0.697801167972428,0,1.31883489114227,0,0,1.34465029290355,0.602694528023977,0.730310090387373,1.46379839637152,0.123121058076788,0.408001382488506,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.283604451492204,0,0.351339142772504,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549605231791222,0,0,0,0,0.759783069987479,0.794455084879313,6.3104056564739,2.4826786753885,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0.312160076830321,0,0,0.23486899728753,0.323745888736263,0.421352420106746,0.204154171254893,0.61417158655884,0,0,0.741800787835671,1.82032272387605,0,0.168336113954066,0.250237039743928,0,0,0.30648779579902,0.150238058906597,0.226864366320042,0.179389635688862,0,0.211931901159562,0,0,0,0,0,0,0,0,0.484938170456436,0,0,0,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0.514703430895577,0.109750285408626,0,0,0.185176890317059,0,0,1.44331342025273,0,0.821860859650752,0.144366447761074,0,0,0,0,0,0,0,0,0,0.283550194484773,0.0895585227028483,0,0.383382679165211,0,0.176096868026452,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0.22001485746285,0,0,0.845302752556,1.06375246633948,2.08014873822732,0.257207374262142,1.41849132023278,0.532844358032199,0.428933980974443,0,0,0,0.355391948742546,0,0.904318131178758,0,0.099972991182057,0,0,0,0.239624855491583,0,0,1.01346914667305,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0,0,0,0,0.248107807818777,0,0,0.512556597022804,0,0.64341568457443,0,0.308419387605311,0.177561725313127,0.164254312027618,0.519254429183621,0.348631135379878,0,1.00253235151642,0,1.49258782613989,0.728364672026868,0.524497659837696,1.35359883872224,0.693138033939733,1.56869953835371,0,0.105551628892876,0,0.170093705276516,0.647747748306418,0,0.812839312631559,0.501689773854853,0,0.831076008928724,0.895499018888713,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0,0.413509717453592,0,0,0.0852266274161009,0,0,0,0,0,0,8.18512101759664,0,0,1.06461206063404,0,0.37064843820784,0.286249773483982,0,0.632758849437452,0.190630193923825,0.255897791311334,0.855877976067841,0.95460974377781,0.78494864019923,0.539617372749944,1.64722217841633,0.824686816419805,1.01091240786658,0,0,0,5.11798328225697,3.16950440270266,0.409499734223957,2.2624869112594,5.65040583101214,0,2.65375590096488,2.19225442626881,0,0,0,0,0,0.573645408816206,0.0982490410131212,0,0.354761064070598,0,0.658589785919804,0.379473173765715,0.349934720244983,0,0,1.08890984861323,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.306806047506464,0,0.933118762985422,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.34945333648406,0,0,0,0,0,0,0.225980740780532,0.685209623233754,0.19871461170299,0,0,0,0.213452994739353,0.39961921916426,0,0,0,0,0,0,0.135904206073614,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.104909176269996,0.211200673038813,0.179287339332845,0,0.714695326373367,0,0,9.77399283156683,16.4202083328241,18.9420668863457,0,0,0,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.606596470166591,0.570930667089935,5.17584803335978,0,0,0.149254802886874,0.233713309847224,0.554805861502613,0,0,0.889811221596536,0,1.96600200892211,0.466311601748341,0,1.11507737014592,0,0.155262956876259,2.07353103920428,0.53168342911599,1.5652351854352,0,6.09288339470073,3.66183659884195,0.545545977607678,0.322231671127465,0.464033759878494,1.99047944349308,0.800055529326307,0.343395705182793,0,0,0.192619830407303,0,0,0,0,0.244736704506468,0.358177682162975,0.308801447160972,0,2.12026975135057,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,1.531227386766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.982631505060581,0,0,0,0,0,0,0,0.496211178389294,0,0.638812138197976,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0.078493092850514,0,0,0.913158720509496,0,0,0.285906176706625,0,0.23248285073625,0.173858272302579,0,0.207216164163037,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0.490296643507811,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0,0.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| ||
|short_description=p@chr8:42036539..42036561,- | |short_description=p@chr8:42036539..42036561,- | ||
}} | }} |
Latest revision as of 18:29, 31 July 2015
Short description: | p@chr8:42036539..42036561, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:42036539..42036561, - |
Coexpression cluster: | C471_Smooth_Fibroblast_leiomyoma_mesenchymal_Mesothelial_meningioma_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 2.12e-16 | 5 |
smooth muscle cell | 8.61e-14 | 43 |
smooth muscle myoblast | 8.61e-14 | 43 |
vascular associated smooth muscle cell | 2.56e-13 | 32 |
muscle precursor cell | 2.66e-11 | 58 |
myoblast | 2.66e-11 | 58 |
multi-potent skeletal muscle stem cell | 2.66e-11 | 58 |
smooth muscle cell of the internal thoracic artery | 3.50e-11 | 2 |
muscle cell | 3.00e-10 | 55 |
electrically responsive cell | 5.25e-09 | 61 |
electrically active cell | 5.25e-09 | 61 |
aortic smooth muscle cell | 9.26e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.99e-16 | 3 |
leiomyoma | 1.99e-16 | 3 |
benign neoplasm | 1.94e-12 | 4 |
ovarian cancer | 4.85e-12 | 14 |