FFCP PHASE1:Hg19::chr8:42033640..42033671,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:42033640..42033671,- | |||
|coexpression_cluster_id=C471 | |||
|description=CAGE_peak_at_chr8:42033640..42033671,- | |description=CAGE_peak_at_chr8:42033640..42033671,- | ||
|id=chr8:42033640..42033671,- | |id=chr8:42033640..42033671,- | ||
|ontology_enrichment_celltype=CL:0000192!2.20e-16!42;CL:0000514!2.20e-16!42;CL:0000680!9.03e-16!57;CL:0000056!9.03e-16!57;CL:0000355!9.03e-16!57;CL:0000183!6.74e-15!59;CL:0000187!3.28e-14!54;CL:0000055!9.15e-14!180;CL:0000393!1.90e-12!60;CL:0000211!1.90e-12!60;CL:0000359!4.00e-12!32;CL:0000222!9.09e-10!119;CL:0002539!2.89e-07!10 | |ontology_enrichment_celltype=CL:0000192!2.20e-16!42;CL:0000514!2.20e-16!42;CL:0000680!9.03e-16!57;CL:0000056!9.03e-16!57;CL:0000355!9.03e-16!57;CL:0000183!6.74e-15!59;CL:0000187!3.28e-14!54;CL:0000055!9.15e-14!180;CL:0000393!1.90e-12!60;CL:0000211!1.90e-12!60;CL:0000359!4.00e-12!32;CL:0000222!9.09e-10!119;CL:0002539!2.89e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.55e-12;32!CL:0000192;1.58e-11;43!CL:1000306;7.02e-11;4!CL:0002547;7.02e-11;4!CL:0002595;2.17e-09;5!CL:0000239;3.21e-08;3!CL:1000615;3.21e-08;3!CL:0002306;3.21e-08;3!CL:0002592;3.21e-08;3!CL:0002622;3.21e-08;3!CL:0000134;6.44e-07;55!CL:0000187;9.38e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.75e-15,43;CL:0000514,2.75e-15,43;CL:0000359,5.05e-13,32;CL:0000680,8.13e-13,58;CL:0000056,8.13e-13,58;CL:0000355,8.13e-13,58;CL:0000187,2.63e-12,55;CL:0000222,5.04e-12,121;CL:1000306,5.08e-11,4;CL:0002547,5.08e-11,4;CL:0000393,1.29e-10,61;CL:0000211,1.29e-10,61;CL:0002595,2.31e-09,5;CL:0002592,3.12e-08,3;CL:0000239,3.91e-08,3;CL:1000615,3.91e-08,3;CL:0002306,3.91e-08,3;CL:0002622,4.54e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000514;1.58e-11;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;5.72e-11;14!DOID:0060084;1.07e-09;3!DOID:127;1.07e-09;3!DOID:0060072;2.46e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.61e-11,14;DOID:0060084,1.08e-09,3;DOID:127,1.08e-09,3;DOID:0060072,2.48e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001637!8.25e-16!42;UBERON:0003509!8.25e-16!42;UBERON:0004572!8.25e-16!42;UBERON:0002385!1.65e-14!63;UBERON:0001015!1.65e-14!63;UBERON:0000383!1.65e-14!63;UBERON:0004573!2.00e-14!33;UBERON:0004571!2.00e-14!33;UBERON:0005256!7.87e-14!143;UBERON:0001134!8.29e-14!61;UBERON:0002036!8.29e-14!61;UBERON:0003082!8.29e-14!61;UBERON:0000914!8.92e-14!83;UBERON:0002329!8.92e-14!83;UBERON:0003077!8.92e-14!83;UBERON:0003059!8.92e-14!83;UBERON:0007282!8.92e-14!83;UBERON:0009618!8.92e-14!83;UBERON:0007285!8.92e-14!83;UBERON:0004290!3.94e-13!70;UBERON:0001981!4.32e-12!60;UBERON:0007500!4.32e-12!60;UBERON:0004537!4.32e-12!60;UBERON:0006965!4.32e-12!60;UBERON:0002049!4.76e-12!79;UBERON:0007798!4.76e-12!79;UBERON:0003914!1.67e-11!118;UBERON:0000483!5.89e-11!309;UBERON:0000119!6.19e-11!312;UBERON:0000486!1.63e-10!82;UBERON:0001135!3.05e-10!15;UBERON:0000481!3.46e-10!347;UBERON:0004872!4.03e-10!84;UBERON:0000055!8.36e-10!69;UBERON:0000490!1.01e-09!138;UBERON:0002100!4.47e-09!216;UBERON:0000947!1.53e-08!21;UBERON:0010191!1.53e-08!21;UBERON:0004535!1.98e-08!110;UBERON:0001009!2.50e-08!113;UBERON:0000475!3.28e-08!365;UBERON:0000477!1.80e-07!286;UBERON:0004237!2.89e-07!10;UBERON:0004695!2.89e-07!10;UBERON:0002111!2.89e-07!10;UBERON:0004178!2.89e-07!10;UBERON:0003104!4.31e-07!238;UBERON:0009142!4.31e-07!238;UBERON:0004111!6.22e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;8.89e-17;33!UBERON:0004571;8.89e-17;33!UBERON:0001637;2.01e-12;42!UBERON:0003509;2.01e-12;42!UBERON:0004572;2.01e-12;42!UBERON:0004797;7.02e-11;4!UBERON:0000415;7.02e-11;4!UBERON:0007240;7.02e-11;4!UBERON:0005742;7.02e-11;4!UBERON:0005734;7.02e-11;4!UBERON:0004664;7.02e-11;4!UBERON:0004663;7.02e-11;4!UBERON:0003834;2.17e-09;5!UBERON:0001533;2.17e-09;5!UBERON:0000947;2.28e-08;21!UBERON:0010191;2.28e-08;21!UBERON:0003498;3.21e-08;3!UBERON:0005985;3.21e-08;3!UBERON:0006853;3.21e-08;3!UBERON:0007685;3.21e-08;3!UBERON:0004134;3.21e-08;3!UBERON:0001621;3.21e-08;3!UBERON:0001135;1.96e-07;15!UBERON:0007500;8.34e-07;56!UBERON:0001981;8.34e-07;56!UBERON:0004537;8.34e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,5.40e-19,33;UBERON:0004571,5.40e-19,33;UBERON:0001637,6.24e-16,42;UBERON:0003509,6.24e-16,42;UBERON:0004572,6.24e-16,42;UBERON:0002049,8.01e-13,78;UBERON:0007798,8.01e-13,78;UBERON:0001134,1.18e-11,62;UBERON:0002036,1.18e-11,62;UBERON:0003082,1.18e-11,62;UBERON:0007500,2.87e-11,59;UBERON:0001981,2.87e-11,59;UBERON:0004537,2.87e-11,59;UBERON:0006965,2.87e-11,59;UBERON:0002385,3.95e-11,64;UBERON:0001015,3.95e-11,64;UBERON:0000383,3.95e-11,64;UBERON:0000415,5.08e-11,4;UBERON:0007240,5.08e-11,4;UBERON:0005742,5.08e-11,4;UBERON:0005734,5.08e-11,4;UBERON:0004664,5.08e-11,4;UBERON:0004663,5.08e-11,4;UBERON:0000055,2.34e-10,68;UBERON:0004535,4.32e-10,109;UBERON:0003914,9.60e-10,117;UBERON:0001009,1.22e-09,112;UBERON:0002329,1.55e-09,71;UBERON:0003059,1.55e-09,71;UBERON:0007282,1.55e-09,71;UBERON:0004290,1.55e-09,71;UBERON:0009618,1.55e-09,71;UBERON:0004872,1.79e-09,83;UBERON:0003834,2.31e-09,5;UBERON:0001533,2.31e-09,5;UBERON:0003077,2.46e-09,72;UBERON:0007285,2.46e-09,72;UBERON:0007503,3.45e-09,78;UBERON:0007524,3.86e-09,73;UBERON:0003498,1.27e-08,5;UBERON:0005985,1.27e-08,5;UBERON:0000947,1.54e-08,21;UBERON:0010191,1.54e-08,21;UBERON:0000486,2.43e-08,83;UBERON:0001621,3.12e-08,3;UBERON:0006853,3.91e-08,3;UBERON:0007685,3.91e-08,3;UBERON:0004134,3.91e-08,3;UBERON:0003104,6.95e-08,160;UBERON:0009142,6.95e-08,160;UBERON:0000490,1.01e-07,148;UBERON:0001135,1.48e-07,15;UBERON:0000483,1.73e-07,306;UBERON:0005256,2.06e-07,122;UBERON:0000119,2.61e-07,309 | |||
|phase1_expression=0,1.07050261945492,0.422863212287913,0,0,1.74467704820074,0,0,0,0.245733936501509,0,0.655324116390517,1.31883489114227,0.247532705920093,0.662794751455832,2.01697543935533,0.602694528023977,1.46062018077475,0.487932798790507,0.246242116153576,0.612002073732759,0,0,0.547497700291537,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.283604451492204,1.77383517970051,0.527008714158756,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0.838998872419812,0.275118041940067,0,0,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,1.53316637465883,0,0.183201743930407,0,0,0,0,1.2663051166458,1.85372853138506,9.75244510545967,5.67469411517371,0,0,0,0.311211035399766,0.269421344139376,0.163461903113459,0,0,0,0.312160076830321,0,0,0.23486899728753,0.161872944368132,0.280901613404497,0,0.61417158655884,0,0,0.989067717114227,0,2.87447256726495,0.168336113954066,0.875829639103749,0,0.438977620880838,0,0.150238058906597,0.340296549480063,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0.257640540045629,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,0.193260853163297,1.09098448236334,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71567810298526,0,0,0,0.277765335475589,0,2.07986957055916,1.44331342025273,0,0.70445216541493,0,0,0,0,0,0,0,0,0,0,0.850650583454319,0.0895585227028483,0.290633938513962,0,0,0.176096868026452,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0.2933531432838,0,0,0.845302752556,0.797814349754612,2.08014873822732,0,1.41849132023278,1.3321108950805,1.00084595560703,0,0,0,0.710783897485092,1.58390374586686,7.83742380354924,2.61460037580088,1.29964888536674,0,0,0,0.239624855491583,1.14861935834114,1.42636905040718,1.59259437334337,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0.500170521059677,0,0.415941723061614,0.356857977594324,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0,1.02511319404561,0,0.965123526861645,0,0.154209693802656,0.710246901252508,0.246381468041427,1.03850885836724,0.348631135379878,0,3.40860999515584,0,3.3296189967736,1.27463817604702,1.31124414959424,1.80479845162965,0.15403067420883,0,0,0.422206515571503,0,1.02056223165909,0,0,0.812839312631559,0.501689773854853,1.01950509218015,1.66215201785745,3.35812132083267,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0.275673144969061,0.107420244868274,0.145016693914229,0,0,0.165284915360978,0,0.127612712494584,0,0,13.5369309137175,0.6970372701606,0.616067160352178,1.59691809095107,1.73986598415015,0.55597265731176,0.143124886741991,0,0,0.190630193923825,0,0.42793898803392,1.90921948755562,0,0.719489830333259,2.19629623788844,1.41374882814824,1.61745985258653,3.17020642346017,1.26377536871694,0.975267478179181,9.01739911635752,2.11300293513511,0.818999468447914,6.22183900596336,6.78048699721457,0,9.95158462861829,4.38450885253763,0,1.31178950409327,0,0.6196469961995,0,0.430234056612155,0,0.35667105148125,0.709522128141196,0,0,1.13841952129715,1.04980416073495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0.552567831062295,0,0.511343412510774,0,2.48831670129446,0.0898683511473268,0,0,0.295930216910801,0,0,0,0.185536196323703,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0.34823682632161,0.52418000472609,0,0,0,0,0.290967049465258,0,1.12990370390266,0.274083849293502,0,0,0,0,0,0.599428828746391,0,0,0.171594997861965,0,0,0.235694034616795,0.271808412147228,0.313808538937,0,0.288950589901519,0,0,0,0,0,0,0.229160424011684,0,0.399358000997982,0,0,0,0.360299883542404,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.262272940674991,0.211200673038813,0.537862017998534,0,0,0,0,11.9459912385817,21.6055372800317,27.106750889081,0,0,0.170388021785422,0.226624183040251,0,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0.454947352624943,0.570930667089935,10.8222277061159,0,0,0.597019211547496,0,0.554805861502613,0,0,0,0.686520205190771,2.87338755150154,1.5543720058278,1.03498604992744,1.59296767163702,0,0.310525913752519,6.63529932545369,1.86089200190596,2.60872530905867,0,20.1826762449462,3.66183659884195,0.545545977607678,0,1.39210127963548,7.16572599657509,1.60011105865261,0,0.336749488765919,0,0,0,0,0,0,0,0.71635536432595,0,0,3.53378291891762,0.964570191354574,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.8999276376512,0.06422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| ||
|short_description=p@chr8:42033640..42033671,- | |short_description=p@chr8:42033640..42033671,- | ||
}} | }} |
Latest revision as of 18:29, 31 July 2015
Short description: | p@chr8:42033640..42033671, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:42033640..42033671, - |
Coexpression cluster: | C471_Smooth_Fibroblast_leiomyoma_mesenchymal_Mesothelial_meningioma_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.75e-15 | 43 |
smooth muscle myoblast | 2.75e-15 | 43 |
vascular associated smooth muscle cell | 5.05e-13 | 32 |
muscle precursor cell | 8.13e-13 | 58 |
myoblast | 8.13e-13 | 58 |
multi-potent skeletal muscle stem cell | 8.13e-13 | 58 |
muscle cell | 2.63e-12 | 55 |
mesodermal cell | 5.04e-12 | 121 |
fibroblast of tunica adventitia of artery | 5.08e-11 | 4 |
fibroblast of the aortic adventitia | 5.08e-11 | 4 |
electrically responsive cell | 1.29e-10 | 61 |
electrically active cell | 1.29e-10 | 61 |
smooth muscle cell of the subclavian artery | 2.31e-09 | 5 |
smooth muscle cell of the coronary artery | 3.12e-08 | 3 |
brush border epithelial cell | 3.91e-08 | 3 |
kidney cortex tubule cell | 3.91e-08 | 3 |
epithelial cell of proximal tubule | 3.91e-08 | 3 |
prostate stromal cell | 4.54e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.61e-11 | 14 |
cell type benign neoplasm | 1.08e-09 | 3 |
leiomyoma | 1.08e-09 | 3 |
benign neoplasm | 2.48e-07 | 4 |