FFCP PHASE1:Hg19::chr8:42033364..42033376,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr8:42033364..42033376,- | |||
|coexpression_cluster_id=C471 | |||
|description=CAGE_peak_at_chr8:42033364..42033376,- | |||
|id=chr8:42033364..42033376,- | |||
|ontology_enrichment_celltype=CL:0000183!2.38e-20!59;CL:0000680!9.49e-19!57;CL:0000056!9.49e-19!57;CL:0000355!9.49e-19!57;CL:0000187!1.39e-17!54;CL:0000192!4.70e-17!42;CL:0000514!4.70e-17!42;CL:0000393!9.71e-15!60;CL:0000211!9.71e-15!60;CL:0000055!1.71e-14!180;CL:0000359!5.25e-11!32;CL:0000222!1.45e-10!119;CL:1000507!4.12e-07!12;CL:1000494!4.12e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002595;4.07e-23;5!CL:0002593;2.53e-15;2!CL:0000359;5.47e-13;32!CL:0000192;3.52e-12;43!CL:0002591;1.63e-08;1!CL:0002379;2.17e-08;1!CL:0002616;5.06e-08;1!CL:1000306;5.64e-08;4!CL:0002547;5.64e-08;4!CL:0002539;8.63e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,4.69e-23,5;CL:0002593,3.14e-15,2;CL:0000192,1.45e-14,43;CL:0000514,1.45e-14,43;CL:0000359,5.34e-13,32;CL:0000187,5.10e-11,55;CL:0000680,2.32e-10,58;CL:0000056,2.32e-10,58;CL:0000355,2.32e-10,58;CL:0000393,9.06e-10,61;CL:0000211,9.06e-10,61;CL:0002591,1.63e-08,1;CL:0002379,2.17e-08,1;CL:0002616,3.57e-08,1;CL:1000306,5.26e-08,4;CL:0002547,5.26e-08,4;CL:0002539,8.37e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;3.52e-12;43!UBERON:0005795;3.94e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.20e-22;3!DOID:127;1.20e-22;3!DOID:0060072;3.94e-17;4!DOID:2394;4.83e-12;14!DOID:3620;2.17e-08;1!DOID:3565;2.17e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.20e-22,3;DOID:127,1.20e-22,3;DOID:0060072,3.94e-17,4;DOID:2394,5.44e-12,14;DOID:3620,2.17e-08,1;DOID:3565,2.17e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002385!4.95e-18!63;UBERON:0001015!4.95e-18!63;UBERON:0000383!4.95e-18!63;UBERON:0004290!5.89e-18!70;UBERON:0005256!1.68e-17!143;UBERON:0000486!3.81e-17!82;UBERON:0001134!9.43e-17!61;UBERON:0002036!9.43e-17!61;UBERON:0003082!9.43e-17!61;UBERON:0004573!1.20e-16!33;UBERON:0004571!1.20e-16!33;UBERON:0000914!6.28e-16!83;UBERON:0002329!6.28e-16!83;UBERON:0003077!6.28e-16!83;UBERON:0003059!6.28e-16!83;UBERON:0007282!6.28e-16!83;UBERON:0009618!6.28e-16!83;UBERON:0007285!6.28e-16!83;UBERON:0001637!5.18e-14!42;UBERON:0003509!5.18e-14!42;UBERON:0004572!5.18e-14!42;UBERON:0002100!2.11e-12!216;UBERON:0000490!1.89e-11!138;UBERON:0003914!1.01e-10!118;UBERON:0001135!1.39e-10!15;UBERON:0000483!2.44e-10!309;UBERON:0000947!5.06e-10!21;UBERON:0010191!5.06e-10!21;UBERON:0000119!5.13e-10!312;UBERON:0001981!8.23e-10!60;UBERON:0007500!8.23e-10!60;UBERON:0004537!8.23e-10!60;UBERON:0006965!8.23e-10!60;UBERON:0000481!1.62e-09!347;UBERON:0004872!3.01e-09!84;UBERON:0000055!3.18e-09!69;UBERON:0002049!3.92e-09!79;UBERON:0007798!3.92e-09!79;UBERON:0003064!1.97e-08!37;UBERON:0000475!3.13e-08!365;UBERON:0003104!3.32e-08!238;UBERON:0009142!3.32e-08!238;UBERON:0006554!1.33e-07!44;UBERON:0001008!2.63e-07!45;UBERON:0001009!2.70e-07!113;UBERON:0004111!3.20e-07!241;UBERON:0004535!3.49e-07!110;UBERON:0009773!4.12e-07!12;UBERON:0001231!4.12e-07!12;UBERON:0004810!4.12e-07!12;UBERON:0000477!4.73e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;4.07e-23;5!UBERON:0001533;4.07e-23;5!UBERON:0003513;1.41e-16;7!UBERON:0002456;2.53e-15;2!UBERON:0004573;1.09e-14;33!UBERON:0004571;1.09e-14;33!UBERON:0001637;4.15e-10;42!UBERON:0003509;4.15e-10;42!UBERON:0004572;4.15e-10;42!UBERON:0000947;3.78e-08;21!UBERON:0010191;3.78e-08;21!UBERON:0004797;5.64e-08;4!UBERON:0000415;5.64e-08;4!UBERON:0007240;5.64e-08;4!UBERON:0005742;5.64e-08;4!UBERON:0005734;5.64e-08;4!UBERON:0004664;5.64e-08;4!UBERON:0004663;5.64e-08;4!UBERON:0007500;3.81e-07;56!UBERON:0001981;3.81e-07;56!UBERON:0004537;3.81e-07;56!UBERON:0004237;8.63e-07;10!UBERON:0004695;8.63e-07;10!UBERON:0002111;8.63e-07;10!UBERON:0004178;8.63e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,4.69e-23,5;UBERON:0001533,4.69e-23,5;UBERON:0003513,1.56e-16,7;UBERON:0004573,7.07e-16,33;UBERON:0004571,7.07e-16,33;UBERON:0002456,3.14e-15,2;UBERON:0001637,4.35e-15,42;UBERON:0003509,4.35e-15,42;UBERON:0004572,4.35e-15,42;UBERON:0000055,1.49e-10,68;UBERON:0007500,2.99e-10,59;UBERON:0001981,2.99e-10,59;UBERON:0004537,2.99e-10,59;UBERON:0006965,2.99e-10,59;UBERON:0001134,1.39e-09,62;UBERON:0002036,1.39e-09,62;UBERON:0003082,1.39e-09,62;UBERON:0002385,3.11e-09,64;UBERON:0001015,3.11e-09,64;UBERON:0000383,3.11e-09,64;UBERON:0002049,5.96e-09,78;UBERON:0007798,5.96e-09,78;UBERON:0004872,2.98e-08,83;UBERON:0000947,3.59e-08,21;UBERON:0010191,3.59e-08,21;UBERON:0002329,3.70e-08,71;UBERON:0003059,3.70e-08,71;UBERON:0007282,3.70e-08,71;UBERON:0004290,3.70e-08,71;UBERON:0009618,3.70e-08,71;UBERON:0003077,5.06e-08,72;UBERON:0007285,5.06e-08,72;UBERON:0000415,5.26e-08,4;UBERON:0007240,5.26e-08,4;UBERON:0005742,5.26e-08,4;UBERON:0005734,5.26e-08,4;UBERON:0004664,5.26e-08,4;UBERON:0004663,5.26e-08,4;UBERON:0007524,6.87e-08,73;UBERON:0007503,2.81e-07,78;UBERON:0004535,4.91e-07,109;UBERON:0004237,8.37e-07,10;UBERON:0004695,8.37e-07,10;UBERON:0002111,8.37e-07,10;UBERON:0004178,8.37e-07,10;UBERON:0001009,8.63e-07,112;UBERON:0000486,9.67e-07,83 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.446961094427288,1.74467704820074,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0.730310090387373,0.487932798790507,0.123121058076788,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0.443458794925128,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0.208994966536811,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0.366403487860815,0,0,0,0,0.886413581652058,0.397227542439656,4.58938593198102,2.83734705758686,0,0,0,0,0,0.326923806226917,0,0,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0.491337269247072,0,0,0,0.910161361938026,2.87447256726495,0.168336113954066,0.375355559615893,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0,0.323292113637624,0,0,0.169560592310488,0.193260853163297,0.272746120590835,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.370353780634118,0,0,2.88662684050547,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0.129271715757778,0,0,0.797814349754612,0,0,0,0,0.428933980974443,0,0.823240336780769,0,0.355391948742546,0,1.50719688529793,1.74306691720059,0.199945982364114,0,0,0,0,0,0,0.868687840005475,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0,0.256278298511402,0,0.160853921143607,0,0.462629081407967,0.355123450626254,0.246381468041427,0,0.232420756919918,0,0.802025881213139,0,1.7222167224691,0.182091168006717,0.917870904715969,0.451199612907412,0.0770153371044148,0,1.46139224653261,0.422206515571503,0,0.510281115829547,0,0,0.541892875087706,0.501689773854853,0,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460511024178389,0.137836572484531,0,0.145016693914229,0.0852266274161009,0.356128142586949,0,0,0,0,2.32422774648643,5.66662224295152,0,0,0.532306030317022,1.73986598415015,0.55597265731176,0.143124886741991,0,0.949138274156178,0,1.02359116524534,0.42793898803392,0,0.78494864019923,0.359744915166629,0.54907405947211,0.706874414074119,0.808729926293264,0,0.421258456238981,0.975267478179181,4.14312932373184,4.22600587027022,0.545999645631943,3.11091950298168,4.52032466480971,0,3.98063385144732,5.26141062304515,0,0,0,0,0,0.143411352204052,0,0,0.709522128141196,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.398495976502139,0,0,0.20453736500431,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0.0730893170861856,0.0821154570532092,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0.209205692624666,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0.179287339332845,0,0,0,0,7.05899482279827,8.64221491201268,11.1039702437199,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,3.52898729547258,0,0,0.149254802886874,0,0.554805861502613,0,0,0,0.457680136793847,1.05861646634267,0.621748802331122,0.295710299979268,0.477890301491107,0,0.465788870628778,2.48823724704513,1.06336685823198,1.04349012362347,0,4.56966254602554,1.62748293281865,0,0.107410557042488,0,0.796191777397232,0.800055529326307,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0.883445729729405,0.578742114812744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.918736432059601,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982631505060581,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0.913158720509496,0,0,0,0,0.116241425368125,0.173858272302579,0,0.207216164163037,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0.448527450322454,0,0.202117188958219,0,0,0,0.143444410785353,0,0.0814032686109745,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr8:42033364..42033376,- | |||
}} |
Latest revision as of 18:29, 31 July 2015
Short description: | p@chr8:42033364..42033376, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:42033364..42033376, - |
Coexpression cluster: | C471_Smooth_Fibroblast_leiomyoma_mesenchymal_Mesothelial_meningioma_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 4.69e-23 | 5 |
smooth muscle cell of the internal thoracic artery | 3.14e-15 | 2 |
smooth muscle cell | 1.45e-14 | 43 |
smooth muscle myoblast | 1.45e-14 | 43 |
vascular associated smooth muscle cell | 5.34e-13 | 32 |
muscle cell | 5.10e-11 | 55 |
muscle precursor cell | 2.32e-10 | 58 |
myoblast | 2.32e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.32e-10 | 58 |
electrically responsive cell | 9.06e-10 | 61 |
electrically active cell | 9.06e-10 | 61 |
smooth muscle cell of the pulmonary artery | 1.63e-08 | 1 |
meningothelial cell | 2.17e-08 | 1 |
perirenal adipocyte cell | 3.57e-08 | 1 |
fibroblast of tunica adventitia of artery | 5.26e-08 | 4 |
fibroblast of the aortic adventitia | 5.26e-08 | 4 |
aortic smooth muscle cell | 8.37e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.20e-22 | 3 |
leiomyoma | 1.20e-22 | 3 |
benign neoplasm | 3.94e-17 | 4 |
ovarian cancer | 5.44e-12 | 14 |
central nervous system cancer | 2.17e-08 | 1 |
meningioma | 2.17e-08 | 1 |