FFCP PHASE1:Hg19::chr8:41655816..41655828,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:41655816..41655828,-
|short_description=p@chr8:41655816..41655828,-
|description=CAGE_peak_at_chr8:41655816..41655828,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:41655816..41655828,- | |||
|description=CAGE_peak_at_chr8:41655816..41655828,- | |||
|id=chr8:41655816..41655828,- | |||
|ontology_enrichment_celltype=CL:0000055!5.63e-11!180;CL:0000057!3.87e-10!75;CL:0002620!2.75e-08!23;CL:0000548!4.20e-07!679;CL:0000004!4.20e-07!679;CL:0000255!4.20e-07!679;CL:0000012!7.16e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0002379;3.72e-09;1!CL:0000222;1.13e-08;1!CL:0002550;1.13e-08;1!CL:1000449;3.39e-08;15!CL:1000507;3.03e-07;10!CL:1000494;3.03e-07;10!CL:1000497;3.04e-07;17!CL:0002518;3.04e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,3.87e-09,1;CL:0002550,1.42e-08,1;CL:1000449,2.86e-08,15;CL:1000507,2.42e-07,10;CL:1000494,2.42e-07,10;CL:1000497,2.62e-07,17;CL:0002518,2.62e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!1.36e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:3620;3.72e-09;1!DOID:3565;3.72e-09;1!DOID:1036;6.08e-09;8!DOID:8692;2.51e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,3.87e-09,1;DOID:3565,3.87e-09,1;DOID:1036,5.69e-09,8;DOID:8692,2.61e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0001444!1.02e-08!48;UBERON:0000165!5.41e-07!28;UBERON:0000930!5.41e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.13e-08;1!UBERON:0006555;3.39e-08;15!UBERON:0004819;3.39e-08;15!UBERON:0001285;3.39e-08;15!UBERON:0007684;3.39e-08;15!UBERON:0004211;3.03e-07;10!UBERON:0009773;3.03e-07;10!UBERON:0001231;3.03e-07;10!UBERON:0004810;3.03e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,1.65e-08,1;UBERON:0004211,2.86e-08,15;UBERON:0009773,2.86e-08,15;UBERON:0001231,2.86e-08,15;UBERON:0001285,2.86e-08,15;UBERON:0007684,2.86e-08,15;UBERON:0004208,2.86e-08,15;UBERON:0006555,9.26e-08,16;UBERON:0004819,9.26e-08,16;UBERON:0004810,2.42e-07,10 | |||
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| ||
|short_description=p@chr8:41655816..41655828,- | |||
}} | }} |
Latest revision as of 18:26, 31 July 2015
Short description: | p@chr8:41655816..41655828, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:41655816..41655828, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 3.87e-09 | 1 |
fibroblast of the conjuctiva | 1.42e-08 | 1 |
epithelial cell of nephron | 2.86e-08 | 15 |
kidney tubule cell | 2.42e-07 | 10 |
nephron tubule epithelial cell | 2.42e-07 | 10 |
kidney cell | 2.62e-07 | 17 |
kidney epithelial cell | 2.62e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 1.65e-08 | 1 |
nephron epithelium | 2.86e-08 | 15 |
renal tubule | 2.86e-08 | 15 |
nephron tubule | 2.86e-08 | 15 |
nephron | 2.86e-08 | 15 |
uriniferous tubule | 2.86e-08 | 15 |
nephrogenic mesenchyme | 2.86e-08 | 15 |
excretory tube | 9.26e-08 | 16 |
kidney epithelium | 9.26e-08 | 16 |
nephron tubule epithelium | 2.42e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 3.87e-09 | 1 |
meningioma | 3.87e-09 | 1 |
chronic leukemia | 5.69e-09 | 8 |
myeloid leukemia | 2.61e-08 | 31 |