FFCP PHASE1:Hg19::chr8:37554297..37554313,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:37554297..37554313,+
|short_description=p@chr8:37554297..37554313,+
|description=CAGE_peak_at_chr8:37554297..37554313,+
|association_with_transcript=NA
|E...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:37554297..37554313,+ | |||
|coexpression_cluster_id=C398 | |||
|description=CAGE_peak_at_chr8:37554297..37554313,+ | |||
|id=chr8:37554297..37554313,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.95e-12!180;CL:0000183!3.65e-09!59;CL:0000680!9.78e-09!57;CL:0000056!9.78e-09!57;CL:0000355!9.78e-09!57;CL:0000187!1.49e-08!54;CL:0000192!1.65e-07!42;CL:0000514!1.65e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002553;1.48e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,8.84e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;1.52e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.53e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0002385!1.72e-09!63;UBERON:0001015!1.72e-09!63;UBERON:0000383!1.72e-09!63;UBERON:0000475!1.89e-09!365;UBERON:0001134!7.59e-09!61;UBERON:0002036!7.59e-09!61;UBERON:0003082!7.59e-09!61;UBERON:0000486!2.49e-08!82;UBERON:0004290!9.23e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;5.80e-15;4!UBERON:0000923;5.80e-15;4!UBERON:0010316;5.80e-15;4!UBERON:0005291;5.80e-15;4!UBERON:0002050;4.47e-12;5!UBERON:0005423;4.47e-12;5!UBERON:0007195;1.48e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,2.47e-07,1 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.281908808191942,0,0,0,0,0.631719873426831,0.783556884599516,0,0.697801167972428,0,0.263766978228454,0,0.331397375727916,1.34465029290355,1.20538905604795,0,0,0.123121058076788,1.42800483870977,0.313454721478088,0.286235987131057,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422510572623884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.44575660953827,0,0.144846518960824,0,0,0,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.662045904066094,0.286836620748814,0,0,0,0,0.311211035399766,0,0.326923806226917,0,0,0.468642863667593,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0.718618141816238,0,0.125118519871964,0.277064115484183,0,0,0.150238058906597,0.453728732640084,0.179389635688862,0.213557388818567,0,0,0.309157587715317,0.772921620136887,0.558350568994769,0.337552664482532,0.487185025805993,0.757301322732344,0.184099797284599,0.323292113637624,0,0.201504196455281,0,0,0,0.286804595389004,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,1.40890433082986,0,0,0,1.58040879591855,0.858486162094873,0,0,0,0,0,0.141775097242386,0,0.290633938513962,0,0,0,0,0,0,0.253991577168676,0,0,0,0.205654985406647,0.600686115687835,0.285826432630578,0.112131084345361,0,0.22001485746285,0.387815147273333,3.57656445851882,0,1.32969058292435,1.04007436911366,0.257207374262142,0,0,0.285955987316295,0.542621605391443,0,0,0.355391948742546,0,0.904318131178758,0,0.299918973546171,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,1.27047312111232,0,0,0,0,0,0,0,0.613457458595699,0,0,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0.521301686808497,0,0.343143423810856,0,0,0,0,1.66435439510497,0,0,0.153461973288062,0.280660094433074,0.384417447767103,0.511707249066704,0.321707842287215,0,0.154209693802656,0.355123450626254,0.246381468041427,0,0,0,0,0.0920809889358963,0.229628896329213,0.182091168006717,0.393373244878272,0.451199612907412,0.0770153371044148,0.784349769176855,0,0,0,0,0.215915916102139,0,0.270946437543853,1.00337954770971,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0,0.307007349452259,0.137836572484531,0.322260734604821,0.435050081742686,0.340906509664404,0.178064071293475,0,0,0,0,0.464845549297286,0.31481234683064,0,0.924100740528266,0.532306030317022,0,0.55597265731176,0,0,0,0.38126038784765,0.767693373934002,0,1.59101623962968,0,0.179872457583315,0,0.117812402345686,0,0,0.421258456238981,0.48763373908959,0.731140468893853,2.11300293513511,0.545999645631943,0.707027159768564,0,0,0,0,0,1.31178950409327,0.202910376962704,0.30982349809975,0.281695602532241,0.143411352204052,0.589494246078727,0.35667105148125,0.354761064070598,0.633322905892992,0.329294892959902,1.13841952129715,0.349934720244983,0,0,0,0.282431402330337,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,1.28188885352968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.222886768554957,0,0,0.593929361665277,0,0,0,0,0,0,0.398495976502139,0.552567831062295,0.503865495708552,0,0,0,0.0898683511473268,0,0,0.197286811273867,0,1.11136990144637,0,0.0927680981618513,0,0,0.174919999992391,0.724999575434793,0,0,0.236387681767936,0,1.74962768029953,0,0,0,0,0,0,0,0,0.41827123283581,0.461701551022782,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0.995261931078505,0.353830258013357,0.611030144933625,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0.30607276163049,0.379119477770928,1.35291077473043,2.38482840213668,0,0,0,0,0,0,0,0,0.174118413160805,0.698906672968121,0,0,0,0,0.387956065953678,0,0,0,0,0.189932387867636,0.391102765469606,0,0.213452994739353,0,0,0,0,0,0.49701014226173,0,0.951329442515298,0.523014231561666,0.101998217636322,0.577901179803038,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0.335434687599266,0,0.157363764404994,0,0,0,0,0,0.25426853765475,0.542999601753713,0.864221491201268,1.30634944043764,0,0,0,0.339936274560377,0,0,0.258565912723101,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248385611765534,0.276697269872462,0,0.303298235083296,1.42732666772484,0.470531639396343,0,0,0.149254802886874,0,0,0,0.754703705257725,0,0,0.453692771289717,0,0.147855149989634,0,0.449803112163605,0.155262956876259,0,0.53168342911599,0.521745061811734,0.300515217994437,0.380805212168795,0,0.545545977607678,0,0,0.796191777397232,0.400027764663154,0,0,0,0,0,0,0,0.463044948647668,0,0.179088841081487,0.926404341482917,0,0.353378291891762,0.192914038270915,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0,0,0,0,0,0.383683113910955,0,0.314531883711793,0,1.01839517972415,1.70059936081346,4.58562327758308,14.5247678673043,0,0,1.60114149657094,0,0,0.321146125482298,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0.115525666150338,0,0,0.198916222116275,0.300841313397029,0,0,0,0,0,0.270150338473579,0,0.206686796501184,0.19024743058172,0,0,0,0.879356221798103,0,0,0,0,0,0.709618961301111,0,0,0.271878931907327,0.263091094251396,0,0.111231401892069,0.313972371402056,0,0,0,0,0,0.214429632529969,0,0,0.347716544605159,0.801711364730253,0.414432328326074,0,0,0,0.354996002191696,0.0852134047591577,0,0,0,0,0,0.392600934460972,0,0,0.102662806856247,2.3196288626764,0,0,0,0,0.11294608203896,0,0,0.0771741581079447,0.218559560503957,0,0.490296643507811,0.235676547101626,0,0,0,0.339854229375634,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,1.10440093535229,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0.151557396436479,0,0,0,0,0.476128862927481,0.0645889098360061,0.31037357147929,0,0,0,0,0.684466602170562,0.134704106029175,0.0717222053926763,0.332660356546013,0.244209805832924,3.62872975984233,0,0.179650404213174,0,0.244482888365733,0.406896178315738,0,0.402547587182052,0 | |phase1_expression=0.363356758541113,0.642301571672949,0.281908808191942,0,0,0,0,0.631719873426831,0.783556884599516,0,0.697801167972428,0,0.263766978228454,0,0.331397375727916,1.34465029290355,1.20538905604795,0,0,0.123121058076788,1.42800483870977,0.313454721478088,0.286235987131057,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422510572623884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.44575660953827,0,0.144846518960824,0,0,0,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.662045904066094,0.286836620748814,0,0,0,0,0.311211035399766,0,0.326923806226917,0,0,0.468642863667593,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0.718618141816238,0,0.125118519871964,0.277064115484183,0,0,0.150238058906597,0.453728732640084,0.179389635688862,0.213557388818567,0,0,0.309157587715317,0.772921620136887,0.558350568994769,0.337552664482532,0.487185025805993,0.757301322732344,0.184099797284599,0.323292113637624,0,0.201504196455281,0,0,0,0.286804595389004,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,1.40890433082986,0,0,0,1.58040879591855,0.858486162094873,0,0,0,0,0,0.141775097242386,0,0.290633938513962,0,0,0,0,0,0,0.253991577168676,0,0,0,0.205654985406647,0.600686115687835,0.285826432630578,0.112131084345361,0,0.22001485746285,0.387815147273333,3.57656445851882,0,1.32969058292435,1.04007436911366,0.257207374262142,0,0,0.285955987316295,0.542621605391443,0,0,0.355391948742546,0,0.904318131178758,0,0.299918973546171,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,1.27047312111232,0,0,0,0,0,0,0,0.613457458595699,0,0,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0.521301686808497,0,0.343143423810856,0,0,0,0,1.66435439510497,0,0,0.153461973288062,0.280660094433074,0.384417447767103,0.511707249066704,0.321707842287215,0,0.154209693802656,0.355123450626254,0.246381468041427,0,0,0,0,0.0920809889358963,0.229628896329213,0.182091168006717,0.393373244878272,0.451199612907412,0.0770153371044148,0.784349769176855,0,0,0,0,0.215915916102139,0,0.270946437543853,1.00337954770971,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0,0.307007349452259,0.137836572484531,0.322260734604821,0.435050081742686,0.340906509664404,0.178064071293475,0,0,0,0,0.464845549297286,0.31481234683064,0,0.924100740528266,0.532306030317022,0,0.55597265731176,0,0,0,0.38126038784765,0.767693373934002,0,1.59101623962968,0,0.179872457583315,0,0.117812402345686,0,0,0.421258456238981,0.48763373908959,0.731140468893853,2.11300293513511,0.545999645631943,0.707027159768564,0,0,0,0,0,1.31178950409327,0.202910376962704,0.30982349809975,0.281695602532241,0.143411352204052,0.589494246078727,0.35667105148125,0.354761064070598,0.633322905892992,0.329294892959902,1.13841952129715,0.349934720244983,0,0,0,0.282431402330337,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,1.28188885352968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.222886768554957,0,0,0.593929361665277,0,0,0,0,0,0,0.398495976502139,0.552567831062295,0.503865495708552,0,0,0,0.0898683511473268,0,0,0.197286811273867,0,1.11136990144637,0,0.0927680981618513,0,0,0.174919999992391,0.724999575434793,0,0,0.236387681767936,0,1.74962768029953,0,0,0,0,0,0,0,0,0.41827123283581,0.461701551022782,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0.995261931078505,0.353830258013357,0.611030144933625,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0.30607276163049,0.379119477770928,1.35291077473043,2.38482840213668,0,0,0,0,0,0,0,0,0.174118413160805,0.698906672968121,0,0,0,0,0.387956065953678,0,0,0,0,0.189932387867636,0.391102765469606,0,0.213452994739353,0,0,0,0,0,0.49701014226173,0,0.951329442515298,0.523014231561666,0.101998217636322,0.577901179803038,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0.335434687599266,0,0.157363764404994,0,0,0,0,0,0.25426853765475,0.542999601753713,0.864221491201268,1.30634944043764,0,0,0,0.339936274560377,0,0,0.258565912723101,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248385611765534,0.276697269872462,0,0.303298235083296,1.42732666772484,0.470531639396343,0,0,0.149254802886874,0,0,0,0.754703705257725,0,0,0.453692771289717,0,0.147855149989634,0,0.449803112163605,0.155262956876259,0,0.53168342911599,0.521745061811734,0.300515217994437,0.380805212168795,0,0.545545977607678,0,0,0.796191777397232,0.400027764663154,0,0,0,0,0,0,0,0.463044948647668,0,0.179088841081487,0.926404341482917,0,0.353378291891762,0.192914038270915,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0,0,0,0,0,0.383683113910955,0,0.314531883711793,0,1.01839517972415,1.70059936081346,4.58562327758308,14.5247678673043,0,0,1.60114149657094,0,0,0.321146125482298,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0.115525666150338,0,0,0.198916222116275,0.300841313397029,0,0,0,0,0,0.270150338473579,0,0.206686796501184,0.19024743058172,0,0,0,0.879356221798103,0,0,0,0,0,0.709618961301111,0,0,0.271878931907327,0.263091094251396,0,0.111231401892069,0.313972371402056,0,0,0,0,0,0.214429632529969,0,0,0.347716544605159,0.801711364730253,0.414432328326074,0,0,0,0.354996002191696,0.0852134047591577,0,0,0,0,0,0.392600934460972,0,0,0.102662806856247,2.3196288626764,0,0,0,0,0.11294608203896,0,0,0.0771741581079447,0.218559560503957,0,0.490296643507811,0.235676547101626,0,0,0,0.339854229375634,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,1.10440093535229,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0.151557396436479,0,0,0,0,0.476128862927481,0.0645889098360061,0.31037357147929,0,0,0,0,0.684466602170562,0.134704106029175,0.0717222053926763,0.332660356546013,0.244209805832924,3.62872975984233,0,0.179650404213174,0,0.244482888365733,0.406896178315738,0,0.402547587182052,0 | ||
|short_description=p@chr8:37554297..37554313,+ | |||
}} | }} |
Latest revision as of 18:05, 31 July 2015
Short description: | p@chr8:37554297..37554313, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:37554297..37554313, + |
Coexpression cluster: | C398_neuroepithelioma_neuroectodermal_carcinoid_neuroblastoma_spinal_brain_synovial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 8.84e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 2.47e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.53e-10 | 10 |