FFCP PHASE1:Hg19::chr8:29940840..29940888,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:29940840..29940888,+ | |||
|coexpression_cluster_id=C616 | |coexpression_cluster_id=C616 | ||
|description=CAGE_peak_at_chr8:29940840..29940888,+ | |description=CAGE_peak_at_chr8:29940840..29940888,+ | ||
|id=chr8:29940840..29940888,+ | |id=chr8:29940840..29940888,+ | ||
|ontology_enrichment_celltype=CL:0000860;8.22e-45;33!CL:0002057;8.22e-45;33!CL:0000473;4.44e-31;39!CL:0000234;4.44e-31;39!CL:0000576;1.92e-27;48!CL:0000766;1.06e-21;69!CL:0000791;4.93e-21;18!CL:0000789;4.93e-21;18!CL:0002419;4.93e-21;18!CL:0002087;4.29e-16;104!CL:0000084;4.25e-14;25!CL:0000738;5.29e-14;136!CL:0000624;1.92e-12;6!CL:0000625;3.47e-12;11!CL:0000542;9.99e-10;53!CL:0000094;1.46e-09;8!CL:0000763;2.62e-09;100!CL:0000988;6.80e-09;177!CL:0000623;1.64e-08;3!CL:0000097;6.66e-08;5!CL:0000219;1.44e-07;193!CL:0000767;2.05e-07;3!CL:0000784;2.85e-07;3!CL:0000081;9.92e-07;11 | |ontology_enrichment_celltype=CL:0000738!1.79e-41!140;CL:0000037!7.85e-37!172;CL:0000566!7.85e-37!172;CL:0002032!3.10e-33!165;CL:0000837!3.10e-33!165;CL:0000988!1.88e-32!182;CL:0002031!2.34e-32!124;CL:0002087!1.61e-31!119;CL:0002057!3.53e-29!42;CL:0000860!4.87e-27!45;CL:0000766!2.78e-25!76;CL:0000763!3.94e-21!112;CL:0000049!3.94e-21!112;CL:0000839!1.32e-20!70;CL:0000557!2.67e-20!71;CL:0002194!1.51e-18!63;CL:0000576!1.51e-18!63;CL:0000040!1.51e-18!63;CL:0000559!1.51e-18!63;CL:0002009!1.57e-18!65;CL:0000791!7.72e-12!18;CL:0000789!7.72e-12!18;CL:0002420!7.72e-12!18;CL:0002419!7.72e-12!18;CL:0000790!7.72e-12!18;CL:0000838!1.38e-11!52;CL:0000542!3.90e-11!53;CL:0000051!3.90e-11!53;CL:0000625!3.18e-08!11;CL:0000134!1.66e-07!358;CL:0002320!4.82e-07!365;CL:0000084!8.26e-07!25;CL:0000827!8.26e-07!25 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;8.22e-45;33!CL:0002057;8.22e-45;33!CL:0000473;4.44e-31;39!CL:0000234;4.44e-31;39!CL:0000576;1.92e-27;48!CL:0000766;1.06e-21;69!CL:0000791;4.93e-21;18!CL:0000789;4.93e-21;18!CL:0002419;4.93e-21;18!CL:0002087;4.29e-16;104!CL:0000084;4.25e-14;25!CL:0000738;5.29e-14;136!CL:0000624;1.92e-12;6!CL:0000625;3.47e-12;11!CL:0000542;9.99e-10;53!CL:0000094;1.46e-09;8!CL:0000763;2.62e-09;100!CL:0000988;6.80e-09;177!CL:0000623;1.64e-08;3!CL:0000097;6.66e-08;5!CL:0000219;1.44e-07;193!CL:0000767;2.05e-07;3!CL:0000784;2.85e-07;3!CL:0000081;9.92e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.26e-69,136;CL:0002031,7.40e-55,120;CL:0002087,2.86e-53,115;CL:0000037,8.99e-53,168;CL:0000860,2.87e-51,42;CL:0002057,2.87e-51,42;CL:0000766,3.28e-49,72;CL:0000988,3.97e-49,177;CL:0002032,2.16e-48,161;CL:0000837,2.16e-48,161;CL:0000473,1.51e-43,48;CL:0000234,1.51e-43,48;CL:0000839,3.65e-39,66;CL:0000557,2.05e-38,67;CL:0002194,7.47e-35,59;CL:0000576,7.47e-35,59;CL:0000040,7.47e-35,59;CL:0000559,7.47e-35,59;CL:0002009,2.17e-33,61;CL:0000763,3.87e-30,108;CL:0000049,3.87e-30,108;CL:0000791,1.73e-21,18;CL:0000789,1.73e-21,18;CL:0002420,1.73e-21,18;CL:0002419,1.73e-21,18;CL:0000790,1.73e-21,18;CL:0000838,1.69e-16,52;CL:0000542,4.58e-16,53;CL:0000051,4.58e-16,53;CL:0000134,3.26e-15,354;CL:0002320,1.45e-14,361;CL:0000084,2.07e-14,25;CL:0000827,2.07e-14,25;CL:0000624,9.60e-13,6;CL:0000625,2.15e-12,11;CL:0000219,2.66e-12,386;CL:0000094,7.97e-10,8;CL:0000048,1.43e-09,427;CL:0000034,3.10e-09,441;CL:0000723,3.38e-09,433;CL:0000623,1.69e-08,3;CL:0000825,1.69e-08,3;CL:0000097,9.37e-08,5;CL:0002028,9.37e-08,5;CL:0000767,1.26e-07,3;CL:0000784,3.92e-07,3;CL:0000081,6.52e-07,11;CL:0000898,8.74e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.28e-36;42!CL:0000790;4.93e-21;18!CL:0000051;9.99e-10;53!CL:0000049;1.36e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.18e-21!102;UBERON:0003061!2.18e-21!102;UBERON:0002371!5.06e-19!80;UBERON:0002193!8.74e-19!112;UBERON:0001474!3.53e-17!86;UBERON:0002405!1.16e-14!115;UBERON:0004765!5.45e-13!101;UBERON:0001434!5.45e-13!101;UBERON:0007023!1.47e-10!115;UBERON:0001049!1.89e-07!57;UBERON:0005068!1.89e-07!57;UBERON:0006241!1.89e-07!57;UBERON:0007135!1.89e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.46e-32,76;UBERON:0002390,6.08e-31,98;UBERON:0003061,6.08e-31,98;UBERON:0002405,1.61e-29,93;UBERON:0001474,2.25e-29,82;UBERON:0002193,2.36e-28,108;UBERON:0004765,8.65e-26,90;UBERON:0001434,3.99e-22,100;UBERON:0002384,1.10e-13,371;UBERON:0002204,3.52e-09,167;UBERON:0003081,5.90e-09,203 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.236132343941038,3.93364276848904,1.91914699048606,3.56077083626975,0,0,0,0,0.142169232487422,0.880801318004542,1.66198622559563,1.40381113229099,0.868043482863407,0,0.32389366601898,0.515151135268373,0.581592955118259,1.13362783106643,3.39617685662943,2.09186133215116,2.05583944010913,4.33588919253145,1.43846196161075,1.7931249457037,4.25668013799453,2.06847408441971,3.87290810150296,6.77132432971709,0.376484679085209,1.09162460023138,5.39336362668203,1.22433556948361,4.17207735198922,4.47535988059329,1.64925650093358,1.99463657621632,4.68847225585964,1.16083695451434,2.8369261234557,3.11411124497787,1.50749199154046,1.5644487552606,6.73285418585862,0,2.94622108790052,5.06339819905415,1.26753171787165,0.637812899895131,2.09658645508376,2.13424399178341,1.20141514273205,0.964353520182481,0,0.19891667719909,1.0959849225878,0,0.546138611262131,0,0.426730222566507,2.80277190925209,1.14950487990897,1.32208974556972,0.954053754535364,2.27685187643779,1.17447437874188,1.91136614062614,1.32171328579026,0.560508562981536,0,3.93419540227666,2.35806457649499,2.46721798799411,1.00311897234407,1.30368906653436,2.8406868344084,0,0.891283655081389,1.76763544484902,1.99380505125259,1.08321545506006,0.384273959177026,0.390178042679635,0.986627427622057,0.829050053357545,0.289803085735052,1.92772532110679,2.1403266247177,1.04535523804977,0.566546713487831,1.91610246800961,2.06176467289578,1.51811815211702,2.86708872891687,0.651083453856419,2.85135613334512,1.6563263098555,3.19966527886046,0,0.710331756132051,1.64225599384209,5.24177532384304,5.08136371988664,4.77920532813237,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,1.19245312152671,2.28797964312051,3.34311751196608,0.39752481473341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427114777637135,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0.236613600079688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0.492434012174795,0,0,0,0,0,0,0,0,0,1.05658120815871,4.35389042635621,5.33243827642757,6.69084897159814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.85153801009636,5.17506179662842,7.57223914050515,0,0,0.773288812777695,0.335032530668698,0.637938751653163,0.749007023947182,0,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,2.5885704098234,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.9273691048295,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0.354761064070598,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0.648473311192717,0.540031437238115,0,0,0,0,0,0.28853842595289,0,0,0,0.191505370132367,0.211673582723883,0.649243880549111,0,0.228234679033192,0,0,0.169291777801603,0.321176150207399,0,0,0,0,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0.439524537815682,0,0,0,0.47748896947538,0.296964680832639,0.614321404198464,0.994147647766298,0.844016498463076,0,0,0,0.796991953004279,0.276283915531148,0,0,0,0,0,0,0.511572370226872,0.295930216910801,2.3948309234694,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,2.87506075821184,0.886642856860642,0,0.21787692703798,0,0.230850775511391,0,0,0,0,0,0.0915975934018623,0.533034776018635,0,0.31396051279005,0,0,0,0,0,0.317873157960757,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.337005664903385,0,0,0,0,0,0.394584402849391,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0.0730893170861856,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0.600420288709789,0.410716136675979,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0,0.169346664131569,0,0.817220436669454,0.160753148465019,0.137539436597234,0.415440338029185,0.899895566206002,0,0.182248669974074,0,0,0.577000469484979,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0.146552233678082,0,0.387848869084652,0.92562821219883,0,0,0.747511887973863,0.78602152549833,0,0,0,0,0,0,0.5013797880454,0,0.327872630709804,0.157054096250234,0,0.366078794705889,0.3755727921195,0.573409195690071,1.22021956690538,0.124192805882767,0.138348634936231,0,0,0,0,0,0.144921028610825,0,0,0.554805861502613,0.189403005275089,0,0,0,0,0.15543720058278,0,0.159296767163702,0,0,0,0,0,0.300515217994437,0,0,0.181848659202559,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0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| ||
|short_description=p@chr8:29940840..29940888,+ | |short_description=p@chr8:29940840..29940888,+ | ||
}} | }} |
Latest revision as of 17:50, 31 July 2015
Short description: | p@chr8:29940840..29940888, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:29940840..29940888, + |
Coexpression cluster: | C616_CD14_Natural_CD8_Basophils_Mast_Eosinophils_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.46e-32 | 76 |
hematopoietic system | 6.08e-31 | 98 |
blood island | 6.08e-31 | 98 |
immune system | 1.61e-29 | 93 |
bone element | 2.25e-29 | 82 |
hemolymphoid system | 2.36e-28 | 108 |
skeletal element | 8.65e-26 | 90 |
skeletal system | 3.99e-22 | 100 |
connective tissue | 1.10e-13 | 371 |
musculoskeletal system | 3.52e-09 | 167 |
lateral plate mesoderm | 5.90e-09 | 203 |