FFCP PHASE1:Hg19::chr8:29693127..29693132,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:29693127..29693132,- | |||
|coexpression_cluster_id=C432 | |||
|description=CAGE_peak_at_chr8:29693127..29693132,- | |description=CAGE_peak_at_chr8:29693127..29693132,- | ||
|id=chr8:29693127..29693132,- | |id=chr8:29693127..29693132,- | ||
|ontology_enrichment_celltype=CL:0002057!6.63e-57!42;CL:0000860!6.67e-53!45;CL:0002194!4.79e-45!63;CL:0000576!4.79e-45!63;CL:0000040!4.79e-45!63;CL:0000559!4.79e-45!63;CL:0002009!1.41e-43!65;CL:0000839!2.89e-40!70;CL:0000557!1.17e-39!71;CL:0000766!7.38e-37!76;CL:0000763!1.07e-26!112;CL:0000049!1.07e-26!112;CL:0002087!6.82e-25!119;CL:0002031!9.47e-24!124;CL:0000738!1.23e-20!140;CL:0002032!6.91e-19!165;CL:0000837!6.91e-19!165;CL:0000037!5.73e-18!172;CL:0000566!5.73e-18!172;CL:0000988!8.91e-17!182 | |ontology_enrichment_celltype=CL:0002057!6.63e-57!42;CL:0000860!6.67e-53!45;CL:0002194!4.79e-45!63;CL:0000576!4.79e-45!63;CL:0000040!4.79e-45!63;CL:0000559!4.79e-45!63;CL:0002009!1.41e-43!65;CL:0000839!2.89e-40!70;CL:0000557!1.17e-39!71;CL:0000766!7.38e-37!76;CL:0000763!1.07e-26!112;CL:0000049!1.07e-26!112;CL:0002087!6.82e-25!119;CL:0002031!9.47e-24!124;CL:0000738!1.23e-20!140;CL:0002032!6.91e-19!165;CL:0000837!6.91e-19!165;CL:0000037!5.73e-18!172;CL:0000566!5.73e-18!172;CL:0000988!8.91e-17!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.44e-32;33!CL:0002057;4.44e-32;33!CL:0000473;9.17e-27;39!CL:0000234;9.17e-27;39!CL:0000576;1.15e-13;48!CL:0000766;1.39e-10;69!CL:0002087;5.86e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.39e-28,42;CL:0002057,1.39e-28,42;CL:0000473,4.34e-25,48;CL:0000234,4.34e-25,48;CL:0002194,3.46e-20,59;CL:0000576,3.46e-20,59;CL:0000040,3.46e-20,59;CL:0000559,3.46e-20,59;CL:0002009,1.49e-19,61;CL:0000839,3.91e-18,66;CL:0000557,7.10e-18,67;CL:0000766,1.10e-16,72;CL:0000763,2.52e-11,108;CL:0000049,2.52e-11,108;CL:0002087,1.15e-10,115;CL:0002031,3.06e-10,120;CL:0000738,4.36e-09,136;CL:0002032,9.83e-08,161;CL:0000837,9.83e-08,161;CL:0000037,2.00e-07,168;CL:0000988,4.60e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.81e-22;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.24e-35!80;UBERON:0001474!3.20e-32!86;UBERON:0002390!1.47e-29!102;UBERON:0003061!1.47e-29!102;UBERON:0004765!5.76e-27!101;UBERON:0001434!5.76e-27!101;UBERON:0002193!1.27e-26!112;UBERON:0002405!7.70e-26!115;UBERON:0002204!5.79e-15!167;UBERON:0003081!4.46e-12!216;UBERON:0000997!1.07e-08!1;UBERON:0005056!1.07e-08!1;UBERON:0002384!5.76e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.61e-16,76;UBERON:0001474,9.81e-15,82;UBERON:0004765,1.76e-13,90;UBERON:0002405,4.60e-13,93;UBERON:0002390,2.00e-12,98;UBERON:0003061,2.00e-12,98;UBERON:0001434,3.45e-12,100;UBERON:0002193,2.52e-11,108;UBERON:0002204,1.81e-07,167 | |||
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|short_description=p@chr8:29693127..29693132,- | |short_description=p@chr8:29693127..29693132,- | ||
}} | }} |
Latest revision as of 17:48, 31 July 2015
Short description: | p@chr8:29693127..29693132, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:29693127..29693132, - |
Coexpression cluster: | C432_CD14_choriocarcinoma_Peripheral_CD34_Mast_Fibroblast_granulocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.39e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.39e-28 | 42 |
defensive cell | 4.34e-25 | 48 |
phagocyte | 4.34e-25 | 48 |
monopoietic cell | 3.46e-20 | 59 |
monocyte | 3.46e-20 | 59 |
monoblast | 3.46e-20 | 59 |
promonocyte | 3.46e-20 | 59 |
macrophage dendritic cell progenitor | 1.49e-19 | 61 |
myeloid lineage restricted progenitor cell | 3.91e-18 | 66 |
granulocyte monocyte progenitor cell | 7.10e-18 | 67 |
myeloid leukocyte | 1.10e-16 | 72 |
myeloid cell | 2.52e-11 | 108 |
common myeloid progenitor | 2.52e-11 | 108 |
nongranular leukocyte | 1.15e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 3.06e-10 | 120 |
leukocyte | 4.36e-09 | 136 |
hematopoietic oligopotent progenitor cell | 9.83e-08 | 161 |
hematopoietic multipotent progenitor cell | 9.83e-08 | 161 |
hematopoietic stem cell | 2.00e-07 | 168 |
hematopoietic cell | 4.60e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.61e-16 | 76 |
bone element | 9.81e-15 | 82 |
skeletal element | 1.76e-13 | 90 |
immune system | 4.60e-13 | 93 |
hematopoietic system | 2.00e-12 | 98 |
blood island | 2.00e-12 | 98 |
skeletal system | 3.45e-12 | 100 |
hemolymphoid system | 2.52e-11 | 108 |
musculoskeletal system | 1.81e-07 | 167 |