FFCP PHASE1:Hg19::chr8:27528907..27528919,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:27528907..27528919,+ | |||
|description=CAGE_peak_at_chr8:27528907..27528919,+ | |description=CAGE_peak_at_chr8:27528907..27528919,+ | ||
|id=chr8:27528907..27528919,+ | |id=chr8:27528907..27528919,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.65e-09!180;CL:0000499!1.99e-07!27 | |ontology_enrichment_celltype=CL:0000055!4.65e-09!180;CL:0000499!1.99e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0002582;8.30e-14;3!CL:0000135;1.38e-13;3!CL:0000388;1.38e-13;3!CL:0002570;2.06e-12;8!CL:0000138;3.17e-11;6!CL:0002583;9.19e-10;2!CL:0002334;6.77e-09;12!CL:0000499;3.05e-08;28!CL:0000153;1.70e-07;9!CL:0000447;1.70e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002582,8.19e-14,3;CL:0000135,9.29e-14,3;CL:0000388,9.29e-14,3;CL:0002570,1.49e-12,8;CL:0000058,2.86e-11,6;CL:0000138,2.86e-11,6;CL:0002583,1.10e-09,2;CL:0002334,7.21e-09,12;CL:0000499,2.92e-08,28;CL:0000153,1.59e-07,9;CL:0000447,1.59e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;8.71e-07;3!DOID:127;8.71e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,8.98e-07,3;DOID:127,8.98e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0003075!4.45e-13!86;UBERON:0007284!4.45e-13!86;UBERON:0002346!9.77e-12!90;UBERON:0000064!1.32e-10!219;UBERON:0005743!1.97e-10!86;UBERON:0001049!9.99e-10!57;UBERON:0005068!9.99e-10!57;UBERON:0006241!9.99e-10!57;UBERON:0007135!9.99e-10!57;UBERON:0001017!1.00e-09!82;UBERON:0000073!1.29e-08!94;UBERON:0001016!1.29e-08!94;UBERON:0000955!1.76e-08!69;UBERON:0006238!1.76e-08!69;UBERON:0000481!3.48e-08!347;UBERON:0002616!4.34e-08!59;UBERON:0000033!6.10e-08!123;UBERON:0000119!9.63e-08!312;UBERON:0002020!1.26e-07!34;UBERON:0003528!1.26e-07!34;UBERON:0003056!1.30e-07!61;UBERON:0000153!1.31e-07!129;UBERON:0007811!1.31e-07!129;UBERON:0000483!1.96e-07!309;UBERON:0000956!2.09e-07!25;UBERON:0000203!2.09e-07!25;UBERON:0001869!2.37e-07!32;UBERON:0000477!3.41e-07!286;UBERON:0007023!5.87e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.38e-13;3!UBERON:0000043;1.38e-13;3!UBERON:0007845;1.38e-13;3!UBERON:0001013;5.74e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,9.29e-14,3;UBERON:0000043,9.29e-14,3;UBERON:0007845,9.29e-14,3;UBERON:0003124,9.13e-10,7;UBERON:0001013,4.81e-07,14 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0.631719873426831,0,0,0,0.436882744260345,0,0.990130823680373,0.662794751455832,0,0.602694528023977,0,0,0.246242116153576,2.24400760368678,0.313454721478088,1.43117993565528,0.958120975510189,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0.50133791063589,1.88300474649071,3.9764297352555,2.43317435151318,0.283604451492204,0.665188192387692,0.263504357079378,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0.573673241497627,0,0,0,0,0.311211035399766,0.134710672069688,0.490385709340376,0,0,0.468642863667593,0,0,0.149448680551801,0.469737994575059,0.647491777472526,0.421352420106746,0.204154171254893,0,0.619954687054593,0,0,0,0.718618141816238,0.168336113954066,0.750711119231785,0,0,0,0,0.113432183160021,0.358779271377724,0,0.211931901159562,1.20036438433761,0,0,0,0.506328996723799,0.487185025805993,0,0.368199594569197,0.161646056818812,0,0.302256294682921,0.67824236924195,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.946454400318751,0.168584690078102,0.723033089650446,0.441175890929576,0.217879444092406,0.474541238222193,0,0,0.38474715694639,0,0,0.8231480226628,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,1.10007428731425,0,3.57656445851882,0,0,0,0.257207374262142,2.83698264046557,1.5985330740966,0.142977993658148,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0,0,0.179060963239896,0,0,0,0,1.27047312111232,0,0,1.00509759200609,1.91381625495949,0,0,0,0.858840442033979,2.50085260529839,0,0,0.713715955188647,0,0,0.300946099727719,0,0,3.32112799267718,0.921845842708516,0.173767228936166,0.587403472388222,0.343143423810856,0,0,0,0,4.99306318531491,1.5119514666484,0.496215615637554,0,0,0.128139149255701,0,0,0,4.31787142647436,2.13074070375753,3.28508624055237,4.67328986265259,2.67283870457906,0,0,0,0.229628896329213,0.728364672026868,0,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,1.13733384070897,0,0.215915916102139,1.54227252690289,0,0.501689773854853,0,0.831076008928724,0.223874754722178,0,0,0.256450125116389,0.328014645699706,0,0,0,0,0,0,0,0.48335359146061,0.462145851343933,0.307007349452259,0.275673144969061,0.322260734604821,0.145016693914229,0.511359764496605,0,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0.143124886741991,0,0,0.190630193923825,0.255897791311334,0,0.636406495851874,0,0,0.274537029736055,0.235624804691373,0,0,0.421258456238981,0.48763373908959,0,0,0.272999822815972,0.141405431953713,1.13008116620243,1.10273068709225,0.66343897524122,0,1.73632660280006,0.655894752046633,0,0,0,0.286822704408103,0.196498082026242,0,0.709522128141196,0.844430541190656,0.987884678879706,0.75894634753143,2.79947776195986,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0.296964680832639,0,0,0.562677665642051,0.111308705022906,0,0.422250816255987,0.996239941255349,0.552567831062295,0,0.306806047506464,0,0,0,0,0,0.197286811273867,0,0,0,0.278304294485554,0,0,0,0,0.1137934482855,0,0,0,0,0,0,1.20596438625408,0,0.663475559587348,0,0.219385397153973,0.10893846351899,0,0.307801034015188,0,0,0.269272933229316,0.760531603454056,1.27600463892768,0.549585560411174,2.66517388009317,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0.141353071433941,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568679216656392,0,0,0,0,0,0,0,0,0.520679215005393,0.0979923974143777,0.174118413160805,0.52418000472609,0,0.290268993867255,0.511625219603299,0.492692742319255,0.0969890164884194,0.0882561266915003,0.225980740780532,0,0,0.253243183823515,0.195551382734803,0,0,0,0,0,0,0,0.124252535565433,0.235694034616795,0.951329442515298,0,0.203996435272644,0,0,0.273810757783986,0,0,0,0.279282401272254,0.458320848023367,0,0.599037001496973,0,0.223171457441873,0,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0,0,0,0,0,0.182248669974074,0,0,0,0,0.179287339332845,0,0.714695326373367,0,0,3.80099721227599,0.864221491201268,3.26587360109409,0,0,0.170388021785422,0.226624183040251,0,0,0.258565912723101,0.92562821219883,0,0,0,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0.886068179966986,1.46431517882356,1.251909307065,1.14681839138014,1.22021956690538,0.434674820589684,0.276697269872462,0,0,0,0.941063278792687,0,0,1.64180283175561,0.467426619694449,1.66441758450784,0,0.251567901752575,0,0.228840068396924,0.151230923763239,1.08806040407946,0,0.318593534327405,0,0.155262956876259,0,0,0,0.601030435988874,0,0,0.181848659202559,0,0,0,0,1.71697852591396,1.01024846629776,0,0,0.214441591374926,0,0,0,0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| ||
|short_description=p@chr8:27528907..27528919,+ | |short_description=p@chr8:27528907..27528919,+ | ||
}} | }} |
Latest revision as of 17:39, 31 July 2015
Short description: | p@chr8:27528907..27528919, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:27528907..27528919, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
visceral preadipocyte | 8.19e-14 | 3 |
fibrocyte | 9.29e-14 | 3 |
tendon cell | 9.29e-14 | 3 |
mesenchymal stem cell of adipose | 1.49e-12 | 8 |
chondroblast | 2.86e-11 | 6 |
chondrocyte | 2.86e-11 | 6 |
subcutaneous preadipocyte | 1.10e-09 | 2 |
preadipocyte | 7.21e-09 | 12 |
stromal cell | 2.92e-08 | 28 |
GAG secreting cell | 1.59e-07 | 9 |
carbohydrate secreting cell | 1.59e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 9.29e-14 | 3 |
tendon | 9.29e-14 | 3 |
regular connective tissue | 9.29e-14 | 3 |
chorion | 9.13e-10 | 7 |
adipose tissue | 4.81e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 8.98e-07 | 3 |
leiomyoma | 8.98e-07 | 3 |